RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 CFAP65Q6ZU64 1925 aaKnown RBP29.39■■■□□ 2.3
SPCS3-203ENST00000507678 CDCA8Q53HL2 280 aa29.39■■■□□ 2.3
SPCS3-203ENST00000507678 RNF123Q5XPI4 1314 aa29.39■■■□□ 2.29
SPCS3-203ENST00000507678 STAC3Q96MF2 364 aa29.38■■■□□ 2.29
SPCS3-203ENST00000507678 SENP3Q9H4L4 574 aaPredicted RBP29.37■■■□□ 2.29
SPCS3-203ENST00000507678 EIF3AQ14152 1382 aaKnown RBP29.36■■■□□ 2.29
SPCS3-203ENST00000507678 RCAN3Q9UKA8 241 aa29.35■■■□□ 2.29
SPCS3-203ENST00000507678 ADAMTS8Q9UP79 889 aa29.35■■■□□ 2.29
SPCS3-203ENST00000507678 EFCAB6Q5THR3 1501 aa29.35■■■□□ 2.29
SPCS3-203ENST00000507678 PPP2R1AP30153 589 aa29.34■■■□□ 2.29
SPCS3-203ENST00000507678 PPRC1Q5VV67 1664 aaKnown RBP29.34■■■□□ 2.29
SPCS3-203ENST00000507678 AMER1Q5JTC6 1135 aaPredicted RBP29.34■■■□□ 2.29
SPCS3-203ENST00000507678 NUTM2DQ5VT03 806 aaPredicted RBP29.33■■■□□ 2.29
SPCS3-203ENST00000507678 POGZQ7Z3K3 1410 aa29.31■■■□□ 2.28
SPCS3-203ENST00000507678 RRP1P56182 461 aaKnown RBP29.31■■■□□ 2.28
SPCS3-203ENST00000507678 WDR43Q15061 677 aaKnown RBP eCLIP29.3■■■□□ 2.28
SPCS3-203ENST00000507678 TRAK1Q9UPV9 953 aa29.29■■■□□ 2.28
SPCS3-203ENST00000507678 NOS1P29475 1434 aa29.29■■■□□ 2.28
SPCS3-203ENST00000507678 KIF1BO60333 1816 aa29.28■■■□□ 2.28
SPCS3-203ENST00000507678 ABCA6Q8N139 1617 aa29.27■■■□□ 2.28
SPCS3-203ENST00000507678 MAP3K4Q9Y6R4 1608 aa29.27■■■□□ 2.28
SPCS3-203ENST00000507678 MROH2AA6NES4 1674 aa29.26■■■□□ 2.28
SPCS3-203ENST00000507678 TMEM132EQ6IEE7 984 aa29.26■■■□□ 2.27
SPCS3-203ENST00000507678 EXOC6Q8TAG9 804 aa29.26■■■□□ 2.27
SPCS3-203ENST00000507678 PDE3BQ13370 1112 aa29.26■■■□□ 2.27
SPCS3-203ENST00000507678 NPATQ14207 1427 aa29.26■■■□□ 2.27
SPCS3-203ENST00000507678 PLIN1O60240 522 aa29.25■■■□□ 2.27
SPCS3-203ENST00000507678 PRKCSHP14314 528 aaPredicted RBP29.24■■■□□ 2.27
SPCS3-203ENST00000507678 BLMP54132 1417 aaPredicted RBP29.23■■■□□ 2.27
SPCS3-203ENST00000507678 SYNMO15061 1565 aa29.22■■■□□ 2.27
SPCS3-203ENST00000507678 MSH5O43196 834 aa29.22■■■□□ 2.27
SPCS3-203ENST00000507678 FRMPD1Q5SYB0 1578 aa29.22■■■□□ 2.27
SPCS3-203ENST00000507678 MYOM2P54296 1465 aa29.22■■■□□ 2.27
SPCS3-203ENST00000507678 ASXL1Q8IXJ9 1541 aa29.2■■■□□ 2.27
SPCS3-203ENST00000507678 CCDC146Q8IYE0 955 aa29.2■■■□□ 2.26
SPCS3-203ENST00000507678 ERVK-7P63135 1459 aa29.19■■■□□ 2.26
SPCS3-203ENST00000507678 HECW2Q9P2P5 1572 aa29.19■■■□□ 2.26
SPCS3-203ENST00000507678 MLH3Q9UHC1 1453 aa29.18■■■□□ 2.26
SPCS3-203ENST00000507678 CARD14Q9BXL6 1004 aa29.17■■■□□ 2.26
SPCS3-203ENST00000507678 CYB5RLQ6IPT4 315 aa29.17■■■□□ 2.26
SPCS3-203ENST00000507678 MYOM1P52179 1685 aa29.17■■■□□ 2.26
SPCS3-203ENST00000507678 CENPJQ9HC77 1338 aaPredicted RBP29.17■■■□□ 2.26
SPCS3-203ENST00000507678 KDM5AP29375 1690 aaKnown RBP29.16■■■□□ 2.26
SPCS3-203ENST00000507678 LMTK2Q8IWU2 1503 aa29.16■■■□□ 2.26
SPCS3-203ENST00000507678 KIAA1210Q9ULL0 1709 aa29.15■■■□□ 2.26
SPCS3-203ENST00000507678 CFAP74Q9C0B2 1584 aa29.15■■■□□ 2.26
SPCS3-203ENST00000507678 TNNT2P45379 298 aaPredicted RBP29.14■■■□□ 2.26
SPCS3-203ENST00000507678 ADGRB3O60242 1522 aa29.12■■■□□ 2.25
SPCS3-203ENST00000507678 FANCIQ9NVI1 1328 aa29.12■■■□□ 2.25
SPCS3-203ENST00000507678 PLEKHH1Q9ULM0 1364 aa29.11■■■□□ 2.25
SPCS3-203ENST00000507678 NEURL4Q96JN8 1562 aa29.11■■■□□ 2.25
SPCS3-203ENST00000507678 IFT172Q9UG01 1749 aa29.1■■■□□ 2.25
SPCS3-203ENST00000507678 SAFB2Q14151 953 aaKnown RBP eCLIP29.09■■■□□ 2.25
SPCS3-203ENST00000507678 SLC12A5Q9H2X9 1139 aa29.09■■■□□ 2.25
SPCS3-203ENST00000507678 C14orf93Q9H972 538 aaKnown RBP29.09■■■□□ 2.25
SPCS3-203ENST00000507678 ABCC3O15438 1527 aa29.09■■■□□ 2.25
SPCS3-203ENST00000507678 ZMYM4Q5VZL5 1548 aa29.08■■■□□ 2.25
SPCS3-203ENST00000507678 SLC24A1O60721 1099 aa29.07■■■□□ 2.24
SPCS3-203ENST00000507678 NRXN1Q9ULB1 1477 aa29.07■■■□□ 2.24
SPCS3-203ENST00000507678 PIK3C2GO75747 1445 aa29.05■■■□□ 2.24
SPCS3-203ENST00000507678 APAF1O14727 1248 aa29.04■■■□□ 2.24
SPCS3-203ENST00000507678 YEATS2Q9ULM3 1422 aa29.04■■■□□ 2.24
SPCS3-203ENST00000507678 INSRP06213 1382 aa29.04■■■□□ 2.24
SPCS3-203ENST00000507678 ERICH6Q7L0X2 663 aa29.04■■■□□ 2.24
SPCS3-203ENST00000507678 CRBNQ96SW2 442 aa29.03■■■□□ 2.24
SPCS3-203ENST00000507678 NEO1Q92859 1461 aa29.02■■■□□ 2.24
SPCS3-203ENST00000507678 IDI1Q13907 227 aa29.02■■■□□ 2.24
SPCS3-203ENST00000507678 STK26Q9P289 416 aa29.02■■■□□ 2.24
SPCS3-203ENST00000507678 GOLGA2Q08379 1002 aa29.01■■■□□ 2.23
SPCS3-203ENST00000507678 C20orf194Q5TEA3 1177 aa29.01■■■□□ 2.23
SPCS3-203ENST00000507678 NPC1L1Q9UHC9 1359 aa29.01■■■□□ 2.23
SPCS3-203ENST00000507678 NSD3Q9BZ95 1437 aa29■■■□□ 2.23
SPCS3-203ENST00000507678 DUSP27Q5VZP5 1158 aa28.99■■■□□ 2.23
SPCS3-203ENST00000507678 PPLO60437 1756 aa28.99■■■□□ 2.23
SPCS3-203ENST00000507678 MORC1Q86VD1 984 aa28.98■■■□□ 2.23
SPCS3-203ENST00000507678 SIGLEC1Q9BZZ2 1709 aa28.98■■■□□ 2.23
SPCS3-203ENST00000507678 CAMSAP1Q5T5Y3 1602 aa28.98■■■□□ 2.23
SPCS3-203ENST00000507678 DIP2CQ9Y2E4 1556 aa28.98■■■□□ 2.23
SPCS3-203ENST00000507678 VGFO15240 615 aaPredicted RBP28.97■■■□□ 2.23
SPCS3-203ENST00000507678 RPGRIP1LQ68CZ1 1315 aa28.97■■■□□ 2.23
SPCS3-203ENST00000507678 SBNO2Q9Y2G9 1366 aa28.95■■■□□ 2.22
SPCS3-203ENST00000507678 SPINK5Q9NQ38 1064 aaPredicted RBP28.95■■■□□ 2.22
SPCS3-203ENST00000507678 FAM69CQ0P6D2 419 aa28.94■■■□□ 2.22
SPCS3-203ENST00000507678 ADGRB1O14514 1584 aa28.93■■■□□ 2.22
SPCS3-203ENST00000507678 SETBP1Q9Y6X0 1596 aa28.93■■■□□ 2.22
SPCS3-203ENST00000507678 SKAP1Q86WV1 359 aa28.93■■■□□ 2.22
SPCS3-203ENST00000507678 CABP2Q9NPB3 220 aa28.93■■■□□ 2.22
SPCS3-203ENST00000507678 QRICH2Q9H0J4 1663 aa28.92■■■□□ 2.22
SPCS3-203ENST00000507678 ZNF521Q96K83 1311 aa28.92■■■□□ 2.22
SPCS3-203ENST00000507678 NEUROD2Q15784 382 aa28.92■■■□□ 2.22
SPCS3-203ENST00000507678 FBXO31Q5XUX0 539 aaPredicted RBP28.92■■■□□ 2.22
SPCS3-203ENST00000507678 MYO3AQ8NEV4 1616 aa28.91■■■□□ 2.22
SPCS3-203ENST00000507678 SLFN5Q08AF3 891 aa28.89■■■□□ 2.22
SPCS3-203ENST00000507678 DMRT2Q9Y5R5 561 aa28.88■■■□□ 2.21
SPCS3-203ENST00000507678 EVC2Q86UK5 1308 aa28.87■■■□□ 2.21
SPCS3-203ENST00000507678 RICTORQ6R327 1708 aa28.87■■■□□ 2.21
SPCS3-203ENST00000507678 RRP7AQ9Y3A4 280 aaKnown RBP28.87■■■□□ 2.21
SPCS3-203ENST00000507678 GLI2P10070 1586 aa28.85■■■□□ 2.21
SPCS3-203ENST00000507678 NEXMIFQ5QGS0 1516 aa28.84■■■□□ 2.21
SPCS3-203ENST00000507678 SRPK2P78362 688 aaKnown RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms