RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 KANK4Q5T7N3 995 aaPredicted RBP14.58□□□□□ -0.08
PTPN20-216ENST00000506080 EID1Q9Y6B2 187 aa14.58□□□□□ -0.08
PTPN20-216ENST00000506080 SLIT1O75093 1534 aa14.56□□□□□ -0.08
PTPN20-216ENST00000506080 DUOX2Q9NRD8 1548 aa14.56□□□□□ -0.08
PTPN20-216ENST00000506080 XIRP1Q702N8 1843 aaKnown RBP14.56□□□□□ -0.08
PTPN20-216ENST00000506080 MYOM3Q5VTT5 1437 aa14.55□□□□□ -0.08
PTPN20-216ENST00000506080 VPS8Q8N3P4 1428 aa14.55□□□□□ -0.08
PTPN20-216ENST00000506080 STAG3Q9UJ98 1225 aa14.55□□□□□ -0.08
PTPN20-216ENST00000506080 KIF15Q9NS87 1388 aa14.54□□□□□ -0.08
PTPN20-216ENST00000506080 RRP7BPQ9NSQ0 103 aa14.54□□□□□ -0.08
PTPN20-216ENST00000506080 ARHGAP31Q2M1Z3 1444 aa14.54□□□□□ -0.08
PTPN20-216ENST00000506080 ZNF692Q9BU19 519 aaPredicted RBP14.53□□□□□ -0.08
PTPN20-216ENST00000506080 TMEM2Q9UHN6 1383 aa14.53□□□□□ -0.08
PTPN20-216ENST00000506080 PRDM15P57071 1507 aaPredicted RBP14.53□□□□□ -0.08
PTPN20-216ENST00000506080 PIK3C2BO00750 1634 aa14.52□□□□□ -0.08
PTPN20-216ENST00000506080 FAM135BQ49AJ0 1406 aa14.52□□□□□ -0.08
PTPN20-216ENST00000506080 POTEAQ6S8J7 498 aa14.52□□□□□ -0.08
PTPN20-216ENST00000506080 RBM33Q96EV2 1170 aaKnown RBP14.52□□□□□ -0.08
PTPN20-216ENST00000506080 TMEM94Q12767 1356 aa14.52□□□□□ -0.09
PTPN20-216ENST00000506080 SLC26A8Q96RN1 970 aa14.5□□□□□ -0.09
PTPN20-216ENST00000506080 ABCC5O15440 1437 aa14.5□□□□□ -0.09
PTPN20-216ENST00000506080 ERBINQ96RT1 1412 aa14.5□□□□□ -0.09
PTPN20-216ENST00000506080 LOC105371045A0A1W2PR82 267 aa14.49□□□□□ -0.09
PTPN20-216ENST00000506080 KCNA6P17658 529 aa14.49□□□□□ -0.09
PTPN20-216ENST00000506080 IDI1Q13907 227 aa14.49□□□□□ -0.09
PTPN20-216ENST00000506080 PROSER2Q86WR7 435 aaPredicted RBP14.49□□□□□ -0.09
PTPN20-216ENST00000506080 PIP4P2Q8N4L2 257 aa14.49□□□□□ -0.09
PTPN20-216ENST00000506080 KANK1Q14678 1352 aa14.49□□□□□ -0.09
PTPN20-216ENST00000506080 SSUH2Q9Y2M2 353 aa14.49□□□□□ -0.09
PTPN20-216ENST00000506080 EFCAB6Q5THR3 1501 aa14.48□□□□□ -0.09
PTPN20-216ENST00000506080 ROBO1Q9Y6N7 1651 aa14.47□□□□□ -0.09
PTPN20-216ENST00000506080 CHIC2Q9UKJ5 165 aa14.47□□□□□ -0.09
PTPN20-216ENST00000506080 MAP3K1Q13233 1512 aa14.47□□□□□ -0.09
PTPN20-216ENST00000506080 CROCC2H7BZ55 1655 aa14.47□□□□□ -0.09
PTPN20-216ENST00000506080 PTPN23Q9H3S7 1636 aa14.45□□□□□ -0.1
PTPN20-216ENST00000506080 DAPK1P53355 1430 aa14.45□□□□□ -0.1
PTPN20-216ENST00000506080 BCANQ96GW7 911 aa14.45□□□□□ -0.1
PTPN20-216ENST00000506080 TET3O43151 1660 aa14.45□□□□□ -0.1
PTPN20-216ENST00000506080 KDM5AP29375 1690 aaKnown RBP14.43□□□□□ -0.1
PTPN20-216ENST00000506080 LMTK2Q8IWU2 1503 aa14.42□□□□□ -0.1
PTPN20-216ENST00000506080 MSH6P52701 1360 aa14.42□□□□□ -0.1
PTPN20-216ENST00000506080 FXR2P51116 673 aaKnown RBP eCLIP14.41□□□□□ -0.1
PTPN20-216ENST00000506080 ANKRD30AQ9BXX3 1397 aa14.41□□□□□ -0.1
PTPN20-216ENST00000506080 NOS1P29475 1434 aa14.41□□□□□ -0.1
PTPN20-216ENST00000506080 NKTRP30414 1462 aaKnown RBP14.41□□□□□ -0.1
PTPN20-216ENST00000506080 ADGRB3O60242 1522 aa14.41□□□□□ -0.1
PTPN20-216ENST00000506080 SLAIN2Q9P270 581 aa14.41□□□□□ -0.1
PTPN20-216ENST00000506080 NWD1Q149M9 1564 aa14.4□□□□□ -0.1
PTPN20-216ENST00000506080 SETD1AO15047 1707 aaKnown RBP14.39□□□□□ -0.11
PTPN20-216ENST00000506080 PHLPP1O60346 1717 aa14.39□□□□□ -0.11
PTPN20-216ENST00000506080 SLC52A1Q9NWF4 448 aa14.39□□□□□ -0.11
PTPN20-216ENST00000506080 FGD6Q6ZV73 1430 aa14.39□□□□□ -0.11
PTPN20-216ENST00000506080 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
PTPN20-216ENST00000506080 JCADQ9P266 1359 aa14.38□□□□□ -0.11
PTPN20-216ENST00000506080 PPP1R15AO75807 674 aaPredicted RBP14.37□□□□□ -0.11
PTPN20-216ENST00000506080 PLEKHG1Q9ULL1 1385 aa14.35□□□□□ -0.11
PTPN20-216ENST00000506080 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
PTPN20-216ENST00000506080 ZFYVE9O95405 1425 aa14.35□□□□□ -0.11
PTPN20-216ENST00000506080 RIMS2Q9UQ26 1411 aa14.35□□□□□ -0.11
PTPN20-216ENST00000506080 C14orf37Q86TY3 774 aa14.34□□□□□ -0.11
PTPN20-216ENST00000506080 CHGAP10645 457 aaKnown RBP14.33□□□□□ -0.11
PTPN20-216ENST00000506080 MEX3CQ5U5Q3 659 aaKnown RBP14.33□□□□□ -0.11
PTPN20-216ENST00000506080 MYO5BQ9ULV0 1848 aa14.33□□□□□ -0.11
PTPN20-216ENST00000506080 COL16A1Q07092 1604 aaPredicted RBP14.33□□□□□ -0.12
PTPN20-216ENST00000506080 CHD2O14647 1828 aaKnown RBP14.33□□□□□ -0.12
PTPN20-216ENST00000506080 HDGFP51858 240 aaKnown RBP14.32□□□□□ -0.12
PTPN20-216ENST00000506080 NUTM2DQ5VT03 806 aaPredicted RBP14.32□□□□□ -0.12
PTPN20-216ENST00000506080 LRP6O75581 1613 aa14.32□□□□□ -0.12
PTPN20-216ENST00000506080 GCC2Q8IWJ2 1684 aa14.32□□□□□ -0.12
PTPN20-216ENST00000506080 ADGRL2O95490 1459 aa14.31□□□□□ -0.12
PTPN20-216ENST00000506080 RPRD2Q5VT52 1461 aaKnown RBP14.31□□□□□ -0.12
PTPN20-216ENST00000506080 FAM50AQ14320 339 aaKnown RBP14.31□□□□□ -0.12
PTPN20-216ENST00000506080 TRIM52Q96A61 297 aa14.31□□□□□ -0.12
PTPN20-216ENST00000506080 TBX22Q9Y458 520 aa14.31□□□□□ -0.12
PTPN20-216ENST00000506080 ANKRD50Q9ULJ7 1429 aa14.31□□□□□ -0.12
PTPN20-216ENST00000506080 TMEM131LA2VDJ0 1609 aa14.29□□□□□ -0.12
PTPN20-216ENST00000506080 SPATA31A6Q5VVP1 1343 aa14.29□□□□□ -0.12
PTPN20-216ENST00000506080 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.29□□□□□ -0.12
PTPN20-216ENST00000506080 UPF1Q92900 1129 aaKnown RBP eCLIP14.29□□□□□ -0.12
PTPN20-216ENST00000506080 NCOA3Q9Y6Q9 1424 aa14.28□□□□□ -0.12
PTPN20-216ENST00000506080 ATF3P18847 181 aa14.28□□□□□ -0.12
PTPN20-216ENST00000506080 ZNF772Q68DY9 489 aaPredicted RBP14.28□□□□□ -0.12
PTPN20-216ENST00000506080 CADPS2Q86UW7 1296 aa14.28□□□□□ -0.12
PTPN20-216ENST00000506080 ADAMTS13Q76LX8 1427 aa14.27□□□□□ -0.12
PTPN20-216ENST00000506080 C19orf44Q9H6X5 657 aa14.27□□□□□ -0.12
PTPN20-216ENST00000506080 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.26□□□□□ -0.13
PTPN20-216ENST00000506080 NUTM2BA6NNL0 878 aaPredicted RBP14.26□□□□□ -0.13
PTPN20-216ENST00000506080 NUTM2EB1AL46 878 aaPredicted RBP14.26□□□□□ -0.13
PTPN20-216ENST00000506080 NUTM2AQ8IVF1 878 aaPredicted RBP14.26□□□□□ -0.13
PTPN20-216ENST00000506080 AHDC1Q5TGY3 1603 aaPredicted RBP14.25□□□□□ -0.13
PTPN20-216ENST00000506080 BRINP3Q76B58 766 aa14.24□□□□□ -0.13
PTPN20-216ENST00000506080 RXRBP28702 533 aa14.24□□□□□ -0.13
PTPN20-216ENST00000506080 AMOTL2Q9Y2J4 779 aa14.24□□□□□ -0.13
PTPN20-216ENST00000506080 SHPRHQ149N8 1683 aa14.23□□□□□ -0.13
PTPN20-216ENST00000506080 PIK3R4Q99570 1358 aa14.23□□□□□ -0.13
PTPN20-216ENST00000506080 PTPRUQ92729 1446 aa14.23□□□□□ -0.13
PTPN20-216ENST00000506080 DIP2AQ14689 1571 aa14.23□□□□□ -0.13
PTPN20-216ENST00000506080 E9PCH4 1651 aa14.21□□□□□ -0.13
PTPN20-216ENST00000506080 UNC13BO14795 1591 aa14.21□□□□□ -0.13
PTPN20-216ENST00000506080 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms