RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 CHGAP10645 457 aaKnown RBP26.32■■□□□ 1.8
ARHGEF28-205ENST00000503341 SCAF11Q99590 1463 aaKnown RBP26.3■■□□□ 1.8
ARHGEF28-205ENST00000503341 PPP6R1Q9UPN7 881 aa26.29■■□□□ 1.8
ARHGEF28-205ENST00000503341 ARHGEF40Q8TER5 1519 aa26.28■■□□□ 1.8
ARHGEF28-205ENST00000503341 RPGRIP1LQ68CZ1 1315 aa26.28■■□□□ 1.8
ARHGEF28-205ENST00000503341 CFAP70Q5T0N1 1121 aa26.27■■□□□ 1.8
ARHGEF28-205ENST00000503341 PPLO60437 1756 aa26.27■■□□□ 1.8
ARHGEF28-205ENST00000503341 DISP3Q9P2K9 1392 aa26.26■■□□□ 1.79
ARHGEF28-205ENST00000503341 GTF3C3Q9Y5Q9 886 aa26.26■■□□□ 1.79
ARHGEF28-205ENST00000503341 PREX1Q8TCU6 1659 aa26.25■■□□□ 1.79
ARHGEF28-205ENST00000503341 TMF1P82094 1093 aa26.24■■□□□ 1.79
ARHGEF28-205ENST00000503341 SLC52A1Q9NWF4 448 aa26.24■■□□□ 1.79
ARHGEF28-205ENST00000503341 IDI1Q13907 227 aa26.23■■□□□ 1.79
ARHGEF28-205ENST00000503341 CCDC184Q52MB2 194 aa26.2■■□□□ 1.79
ARHGEF28-205ENST00000503341 PIK3C2GO75747 1445 aa26.2■■□□□ 1.78
ARHGEF28-205ENST00000503341 EIF3AQ14152 1382 aaKnown RBP26.19■■□□□ 1.78
ARHGEF28-205ENST00000503341 ERVK-7P63135 1459 aa26.17■■□□□ 1.78
ARHGEF28-205ENST00000503341 FBXO31Q5XUX0 539 aaPredicted RBP26.17■■□□□ 1.78
ARHGEF28-205ENST00000503341 C14orf93Q9H972 538 aaKnown RBP26.17■■□□□ 1.78
ARHGEF28-205ENST00000503341 CLTCQ00610 1675 aaKnown RBP26.17■■□□□ 1.78
ARHGEF28-205ENST00000503341 SETBP1Q9Y6X0 1596 aa26.17■■□□□ 1.78
ARHGEF28-205ENST00000503341 NEXMIFQ5QGS0 1516 aa26.17■■□□□ 1.78
ARHGEF28-205ENST00000503341 VGFO15240 615 aaPredicted RBP26.14■■□□□ 1.77
ARHGEF28-205ENST00000503341 TMEM131LA2VDJ0 1609 aa26.13■■□□□ 1.77
ARHGEF28-205ENST00000503341 MLECQ14165 292 aa26.13■■□□□ 1.77
ARHGEF28-205ENST00000503341 MRS2Q9HD23 443 aa26.13■■□□□ 1.77
ARHGEF28-205ENST00000503341 PER1O15534 1290 aaPredicted RBP26.1■■□□□ 1.77
ARHGEF28-205ENST00000503341 ZFYVE9O95405 1425 aa26.1■■□□□ 1.77
ARHGEF28-205ENST00000503341 ADGRB1O14514 1584 aa26.09■■□□□ 1.77
ARHGEF28-205ENST00000503341 CDCA8Q53HL2 280 aa26.09■■□□□ 1.77
ARHGEF28-205ENST00000503341 KTN1Q86UP2 1357 aaKnown RBP26.08■■□□□ 1.77
ARHGEF28-205ENST00000503341 CNGB1Q14028 1251 aaPredicted RBP26.08■■□□□ 1.77
ARHGEF28-205ENST00000503341 SPATA31D1Q6ZQQ2 1576 aa26.08■■□□□ 1.77
ARHGEF28-205ENST00000503341 MYO5BQ9ULV0 1848 aa26.08■■□□□ 1.77
ARHGEF28-205ENST00000503341 SLC24A1O60721 1099 aa26.08■■□□□ 1.76
ARHGEF28-205ENST00000503341 NUTM2DQ5VT03 806 aaPredicted RBP26.07■■□□□ 1.76
ARHGEF28-205ENST00000503341 MYO3AQ8NEV4 1616 aa26.07■■□□□ 1.76
ARHGEF28-205ENST00000503341 PANK3Q9H999 370 aa26.06■■□□□ 1.76
ARHGEF28-205ENST00000503341 RALBP1Q15311 655 aa26.05■■□□□ 1.76
ARHGEF28-205ENST00000503341 SBNO2Q9Y2G9 1366 aa26.02■■□□□ 1.76
ARHGEF28-205ENST00000503341 TMEM132EQ6IEE7 984 aa26.02■■□□□ 1.76
ARHGEF28-205ENST00000503341 HNRNPUQ00839 825 aaKnown RBP eCLIP26.01■■□□□ 1.75
ARHGEF28-205ENST00000503341 ZMYM3Q14202 1370 aa26.01■■□□□ 1.75
ARHGEF28-205ENST00000503341 FAM9BQ8IZU0 186 aa26.01■■□□□ 1.75
ARHGEF28-205ENST00000503341 ESF1Q9H501 851 aaKnown RBP26.01■■□□□ 1.75
ARHGEF28-205ENST00000503341 CENPJQ9HC77 1338 aaPredicted RBP26■■□□□ 1.75
ARHGEF28-205ENST00000503341 TRAK1Q9UPV9 953 aa26■■□□□ 1.75
ARHGEF28-205ENST00000503341 PARD3Q8TEW0 1356 aa25.99■■□□□ 1.75
ARHGEF28-205ENST00000503341 MYBBP1AQ9BQG0 1328 aaKnown RBP25.99■■□□□ 1.75
ARHGEF28-205ENST00000503341 KDM5AP29375 1690 aaKnown RBP25.98■■□□□ 1.75
ARHGEF28-205ENST00000503341 STAG3Q9UJ98 1225 aa25.97■■□□□ 1.75
ARHGEF28-205ENST00000503341 TRHP20396 242 aaPredicted RBP25.96■■□□□ 1.75
ARHGEF28-205ENST00000503341 MYOM1P52179 1685 aa25.95■■□□□ 1.75
ARHGEF28-205ENST00000503341 A2ML1A8K2U0 1454 aa25.95■■□□□ 1.75
ARHGEF28-205ENST00000503341 BRD4O60885 1362 aaPredicted RBP25.94■■□□□ 1.74
ARHGEF28-205ENST00000503341 TMC1Q8TDI8 760 aa25.92■■□□□ 1.74
ARHGEF28-205ENST00000503341 QRICH2Q9H0J4 1663 aa25.92■■□□□ 1.74
ARHGEF28-205ENST00000503341 ASXL1Q8IXJ9 1541 aa25.9■■□□□ 1.74
ARHGEF28-205ENST00000503341 CC2D1BQ5T0F9 858 aaKnown RBP25.9■■□□□ 1.74
ARHGEF28-205ENST00000503341 PNISRQ8TF01 805 aaKnown RBP25.9■■□□□ 1.74
ARHGEF28-205ENST00000503341 ARHGEF28Q8N1W1 1705 aaKnown RBP25.89■■□□□ 1.74
ARHGEF28-205ENST00000503341 NLRP13Q86W25 1043 aa25.88■■□□□ 1.73
ARHGEF28-205ENST00000503341 KNSTRNQ9Y448 316 aa25.88■■□□□ 1.73
ARHGEF28-205ENST00000503341 RIMS2Q9UQ26 1411 aa25.86■■□□□ 1.73
ARHGEF28-205ENST00000503341 ALKQ9UM73 1620 aa25.85■■□□□ 1.73
ARHGEF28-205ENST00000503341 TNRQ92752 1358 aa25.85■■□□□ 1.73
ARHGEF28-205ENST00000503341 AMER1Q5JTC6 1135 aaPredicted RBP25.84■■□□□ 1.73
ARHGEF28-205ENST00000503341 SENP3Q9H4L4 574 aaPredicted RBP25.84■■□□□ 1.73
ARHGEF28-205ENST00000503341 LRPPRCP42704 1394 aaKnown RBP25.81■■□□□ 1.72
ARHGEF28-205ENST00000503341 ZBED9Q6R2W3 1325 aa25.81■■□□□ 1.72
ARHGEF28-205ENST00000503341 YTHDC2Q9H6S0 1430 aaKnown RBP25.81■■□□□ 1.72
ARHGEF28-205ENST00000503341 NPC1L1Q9UHC9 1359 aa25.81■■□□□ 1.72
ARHGEF28-205ENST00000503341 PUS7Q96PZ0 661 aaKnown RBP25.8■■□□□ 1.72
ARHGEF28-205ENST00000503341 STK26Q9P289 416 aa25.8■■□□□ 1.72
ARHGEF28-205ENST00000503341 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.78■■□□□ 1.72
ARHGEF28-205ENST00000503341 PTPRMP28827 1452 aa25.78■■□□□ 1.72
ARHGEF28-205ENST00000503341 EVC2Q86UK5 1308 aa25.77■■□□□ 1.72
ARHGEF28-205ENST00000503341 TULP4Q9NRJ4 1543 aa25.77■■□□□ 1.72
ARHGEF28-205ENST00000503341 CARD14Q9BXL6 1004 aa25.76■■□□□ 1.72
ARHGEF28-205ENST00000503341 SETD1AO15047 1707 aaKnown RBP25.74■■□□□ 1.71
ARHGEF28-205ENST00000503341 UBR1Q8IWV7 1749 aa25.73■■□□□ 1.71
ARHGEF28-205ENST00000503341 HDGFP51858 240 aaKnown RBP25.73■■□□□ 1.71
ARHGEF28-205ENST00000503341 CEBPAP49715 358 aaPredicted RBP25.72■■□□□ 1.71
ARHGEF28-205ENST00000503341 DNAJC5Q9H3Z4 198 aa25.72■■□□□ 1.71
ARHGEF28-205ENST00000503341 SAFB2Q14151 953 aaKnown RBP eCLIP25.71■■□□□ 1.71
ARHGEF28-205ENST00000503341 PRAM1Q96QH2 718 aa25.71■■□□□ 1.71
ARHGEF28-205ENST00000503341 SLC12A5Q9H2X9 1139 aa25.71■■□□□ 1.71
ARHGEF28-205ENST00000503341 NRXN3Q9Y4C0 1643 aa25.71■■□□□ 1.71
ARHGEF28-205ENST00000503341 PPP2R1AP30153 589 aa25.71■■□□□ 1.71
ARHGEF28-205ENST00000503341 NLRP1Q9C000 1473 aa25.7■■□□□ 1.7
ARHGEF28-205ENST00000503341 C3P01024 1663 aa25.7■■□□□ 1.7
ARHGEF28-205ENST00000503341 TMEM2Q9UHN6 1383 aa25.7■■□□□ 1.7
ARHGEF28-205ENST00000503341 POGKQ9P215 609 aa25.69■■□□□ 1.7
ARHGEF28-205ENST00000503341 SUPT16HQ9Y5B9 1047 aaKnown RBP25.69■■□□□ 1.7
ARHGEF28-205ENST00000503341 FER1L4A9Z1Z3 1794 aa25.69■■□□□ 1.7
ARHGEF28-205ENST00000503341 DLC1Q96QB1 1528 aa25.68■■□□□ 1.7
ARHGEF28-205ENST00000503341 CABP2Q9NPB3 220 aa25.67■■□□□ 1.7
ARHGEF28-205ENST00000503341 ABCC11Q96J66 1382 aa25.65■■□□□ 1.7
ARHGEF28-205ENST00000503341 MINK1Q8N4C8 1332 aaPredicted RBP25.64■■□□□ 1.7
ARHGEF28-205ENST00000503341 NSD3Q9BZ95 1437 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms