RNA–Protein interactions for RNA: ENST00000502490.1

TRIO-203, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-203ENST00000502490 NCOA1Q15788 1441 aa8.7□□□□□ -1.02
TRIO-203ENST00000502490 TOPBP1Q92547 1522 aa8.7□□□□□ -1.02
TRIO-203ENST00000502490 DNMBPQ6XZF7 1577 aa8.69□□□□□ -1.02
TRIO-203ENST00000502490 KIF21AQ7Z4S6 1674 aa8.69□□□□□ -1.02
TRIO-203ENST00000502490 GCC2Q8IWJ2 1684 aa8.69□□□□□ -1.02
TRIO-203ENST00000502490 SLC34A2O95436 690 aa8.69□□□□□ -1.02
TRIO-203ENST00000502490 RANGAP1P46060 587 aaPredicted RBP8.69□□□□□ -1.02
TRIO-203ENST00000502490 WASHC2AQ641Q2 1341 aa8.69□□□□□ -1.02
TRIO-203ENST00000502490 CUL7Q14999 1698 aa8.69□□□□□ -1.02
TRIO-203ENST00000502490 HAP1P54257 671 aaPredicted RBP8.67□□□□□ -1.02
TRIO-203ENST00000502490 NAIPQ13075 1403 aa8.67□□□□□ -1.02
TRIO-203ENST00000502490 KTN1Q86UP2 1357 aaKnown RBP8.67□□□□□ -1.02
TRIO-203ENST00000502490 EHBP1L1Q8N3D4 1523 aa8.67□□□□□ -1.02
TRIO-203ENST00000502490 PRKRIP1Q9H875 184 aaPredicted RBP8.67□□□□□ -1.02
TRIO-203ENST00000502490 SUPT6HQ7KZ85 1726 aaKnown RBP8.66□□□□□ -1.02
TRIO-203ENST00000502490 POLA1P09884 1462 aaPredicted RBP8.66□□□□□ -1.02
TRIO-203ENST00000502490 TCOF1Q13428 1488 aaKnown RBP8.66□□□□□ -1.02
TRIO-203ENST00000502490 MYOM3Q5VTT5 1437 aa8.66□□□□□ -1.02
TRIO-203ENST00000502490 TCERG1O14776 1098 aaKnown RBP8.66□□□□□ -1.02
TRIO-203ENST00000502490 MS4A1P11836 297 aa8.66□□□□□ -1.02
TRIO-203ENST00000502490 CAMK2BQ13554 666 aa8.66□□□□□ -1.02
TRIO-203ENST00000502490 ZSWIM6Q9HCJ5 1215 aa8.66□□□□□ -1.02
TRIO-203ENST00000502490 CTTNBP2Q8WZ74 1663 aa8.65□□□□□ -1.02
TRIO-203ENST00000502490 MIA2Q96PC5 1412 aa8.65□□□□□ -1.02
TRIO-203ENST00000502490 CCDC7Q96M83 1385 aa8.65□□□□□ -1.02
TRIO-203ENST00000502490 NUDCQ9Y266 331 aa8.65□□□□□ -1.02
TRIO-203ENST00000502490 ROCK2O75116 1388 aaKnown RBP8.64□□□□□ -1.03
TRIO-203ENST00000502490 WASHC2CQ9Y4E1 1318 aa8.64□□□□□ -1.03
TRIO-203ENST00000502490 RIMBP2O15034 1052 aa8.64□□□□□ -1.03
TRIO-203ENST00000502490 PTCD2Q8WV60 388 aaKnown RBP8.64□□□□□ -1.03
TRIO-203ENST00000502490 DDRGK1Q96HY6 314 aa8.64□□□□□ -1.03
TRIO-203ENST00000502490 HCSTQ9UBK5 93 aa8.64□□□□□ -1.03
TRIO-203ENST00000502490 MRC2Q9UBG0 1479 aa8.64□□□□□ -1.03
TRIO-203ENST00000502490 HSPA5P11021 654 aaKnown RBP8.63□□□□□ -1.03
TRIO-203ENST00000502490 GPR153Q6NV75 609 aa8.63□□□□□ -1.03
TRIO-203ENST00000502490 OXER1Q8TDS5 423 aa8.63□□□□□ -1.03
TRIO-203ENST00000502490 CCDC136Q96JN2 1154 aa8.63□□□□□ -1.03
TRIO-203ENST00000502490 MRS2Q9HD23 443 aa8.63□□□□□ -1.03
TRIO-203ENST00000502490 ABCA10Q8WWZ4 1543 aa8.63□□□□□ -1.03
TRIO-203ENST00000502490 INSRP06213 1382 aa8.62□□□□□ -1.03
TRIO-203ENST00000502490 B4GALNT3Q6L9W6 998 aa8.62□□□□□ -1.03
TRIO-203ENST00000502490 ARHGEF11O15085 1522 aa8.62□□□□□ -1.03
TRIO-203ENST00000502490 WDR62O43379 1518 aa8.62□□□□□ -1.03
TRIO-203ENST00000502490 RAD54L2Q9Y4B4 1467 aa8.62□□□□□ -1.03
TRIO-203ENST00000502490 MTUS2Q5JR59 1369 aa8.61□□□□□ -1.03
TRIO-203ENST00000502490 ZMYM4Q5VZL5 1548 aa8.61□□□□□ -1.03
TRIO-203ENST00000502490 UBE2Q2Q8WVN8 375 aa8.61□□□□□ -1.03
TRIO-203ENST00000502490 IRX2Q9BZI1 471 aaPredicted RBP8.61□□□□□ -1.03
TRIO-203ENST00000502490 EMILIN3Q9NT22 766 aa8.61□□□□□ -1.03
TRIO-203ENST00000502490 KDM2AQ9Y2K7 1162 aa8.61□□□□□ -1.03
TRIO-203ENST00000502490 PCDHGA4Q9Y5G9 962 aa8.61□□□□□ -1.03
TRIO-203ENST00000502490 SNAPC4Q5SXM2 1469 aa8.61□□□□□ -1.03
TRIO-203ENST00000502490 SAMD9Q5K651 1589 aa8.61□□□□□ -1.03
TRIO-203ENST00000502490 UGGT2Q9NYU1 1516 aa8.6□□□□□ -1.03
TRIO-203ENST00000502490 LSM11P83369 360 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIO-203ENST00000502490 PDE3BQ13370 1112 aa8.6□□□□□ -1.03
TRIO-203ENST00000502490 RPRD2Q5VT52 1461 aaKnown RBP8.59□□□□□ -1.03
TRIO-203ENST00000502490 TARBP1Q13395 1621 aaKnown RBP8.59□□□□□ -1.03
TRIO-203ENST00000502490 KDM4FA0A1W2PPD8 638 aa8.59□□□□□ -1.03
TRIO-203ENST00000502490 E2F4Q16254 413 aa8.59□□□□□ -1.03
TRIO-203ENST00000502490 VSIG10Q8N0Z9 540 aa8.59□□□□□ -1.03
TRIO-203ENST00000502490 WDR70Q9NW82 654 aa8.59□□□□□ -1.03
TRIO-203ENST00000502490 SPATA31E1Q6ZUB1 1445 aa8.59□□□□□ -1.03
TRIO-203ENST00000502490 ROCK1Q13464 1354 aa8.59□□□□□ -1.03
TRIO-203ENST00000502490 IRX6P78412 446 aaPredicted RBP8.58□□□□□ -1.04
TRIO-203ENST00000502490 NBR1Q14596 966 aa8.58□□□□□ -1.04
TRIO-203ENST00000502490 ARSIQ5FYB1 569 aa8.58□□□□□ -1.04
TRIO-203ENST00000502490 ARIH1Q9Y4X5 557 aaPredicted RBP8.58□□□□□ -1.04
TRIO-203ENST00000502490 GRIN2BQ13224 1484 aa8.57□□□□□ -1.04
TRIO-203ENST00000502490 HIRIP3Q9BW71 556 aaPredicted RBP8.57□□□□□ -1.04
TRIO-203ENST00000502490 PTPRKQ15262 1439 aa8.56□□□□□ -1.04
TRIO-203ENST00000502490 UPF1Q92900 1129 aaKnown RBP eCLIP8.56□□□□□ -1.04
TRIO-203ENST00000502490 KHSRPQ92945 711 aaKnown RBP eCLIP8.56□□□□□ -1.04
TRIO-203ENST00000502490 FHOD3Q2V2M9 1422 aa8.55□□□□□ -1.04
TRIO-203ENST00000502490 FAM9BQ8IZU0 186 aa8.55□□□□□ -1.04
TRIO-203ENST00000502490 RSPH6AQ9H0K4 717 aa8.55□□□□□ -1.04
TRIO-203ENST00000502490 TEX14Q8IWB6 1497 aa8.55□□□□□ -1.04
TRIO-203ENST00000502490 BRD4O60885 1362 aaPredicted RBP8.54□□□□□ -1.04
TRIO-203ENST00000502490 TBC1D12O60347 775 aa8.54□□□□□ -1.04
TRIO-203ENST00000502490 PLEKHH2Q8IVE3 1493 aa8.53□□□□□ -1.04
TRIO-203ENST00000502490 LRPPRCP42704 1394 aaKnown RBP8.53□□□□□ -1.04
TRIO-203ENST00000502490 ANKRD30BQ9BXX2 1392 aa8.53□□□□□ -1.04
TRIO-203ENST00000502490 NEFMP07197 916 aa8.53□□□□□ -1.04
TRIO-203ENST00000502490 NUDT7P0C024 238 aa8.53□□□□□ -1.04
TRIO-203ENST00000502490 RALBP1Q15311 655 aa8.53□□□□□ -1.04
TRIO-203ENST00000502490 BACH2Q9BYV9 841 aa8.53□□□□□ -1.04
TRIO-203ENST00000502490 ANO8Q9HCE9 1232 aaPredicted RBP8.53□□□□□ -1.04
TRIO-203ENST00000502490 KIF7Q2M1P5 1343 aa8.53□□□□□ -1.04
TRIO-203ENST00000502490 ERCC6Q03468 1493 aa8.52□□□□□ -1.05
TRIO-203ENST00000502490 IFT140Q96RY7 1462 aa8.52□□□□□ -1.05
TRIO-203ENST00000502490 TDRD9Q8NDG6 1382 aaKnown RBP8.52□□□□□ -1.05
TRIO-203ENST00000502490 KIF14Q15058 1648 aa8.52□□□□□ -1.05
TRIO-203ENST00000502490 DPYSL4O14531 572 aa8.52□□□□□ -1.05
TRIO-203ENST00000502490 KCNV2Q8TDN2 545 aa8.52□□□□□ -1.05
TRIO-203ENST00000502490 MPHOSPH9Q99550 1183 aa8.52□□□□□ -1.05
TRIO-203ENST00000502490 DENND4BO75064 1496 aaPredicted RBP8.51□□□□□ -1.05
TRIO-203ENST00000502490 DHX29Q7Z478 1369 aaKnown RBP8.51□□□□□ -1.05
TRIO-203ENST00000502490 KIF15Q9NS87 1388 aa8.51□□□□□ -1.05
TRIO-203ENST00000502490 L3MBTL2Q969R5 705 aa8.51□□□□□ -1.05
TRIO-203ENST00000502490 GAPVD1Q14C86 1478 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms