RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 ZEB1P37275 1124 aaPredicted RBP23.75■■□□□ 1.39
LMNA-217ENST00000498722 PPP1R15AO75807 674 aaPredicted RBP23.74■■□□□ 1.39
LMNA-217ENST00000498722 RIMS2Q9UQ26 1411 aa23.74■■□□□ 1.39
LMNA-217ENST00000498722 ZNF326Q5BKZ1 582 aaKnown RBP23.73■■□□□ 1.39
LMNA-217ENST00000498722 FBXO41Q8TF61 875 aa23.72■■□□□ 1.39
LMNA-217ENST00000498722 BCANQ96GW7 911 aa23.72■■□□□ 1.39
LMNA-217ENST00000498722 SENP3Q9H4L4 574 aaPredicted RBP23.72■■□□□ 1.39
LMNA-217ENST00000498722 HDGFP51858 240 aaKnown RBP23.71■■□□□ 1.39
LMNA-217ENST00000498722 CCDC144AA2RUR9 1427 aa23.7■■□□□ 1.38
LMNA-217ENST00000498722 ZFYVE9O95405 1425 aa23.7■■□□□ 1.38
LMNA-217ENST00000498722 NUTM2DQ5VT03 806 aaPredicted RBP23.7■■□□□ 1.38
LMNA-217ENST00000498722 ZNF335Q9H4Z2 1342 aaPredicted RBP23.7■■□□□ 1.38
LMNA-217ENST00000498722 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.67■■□□□ 1.38
LMNA-217ENST00000498722 LTBP4Q8N2S1 1624 aa23.65■■□□□ 1.38
LMNA-217ENST00000498722 CCER1Q8TC90 406 aaPredicted RBP23.64■■□□□ 1.38
LMNA-217ENST00000498722 STRCP1A6NGW2 1772 aa23.64■■□□□ 1.37
LMNA-217ENST00000498722 PPLO60437 1756 aa23.64■■□□□ 1.37
LMNA-217ENST00000498722 CERKQ8TCT0 537 aa23.62■■□□□ 1.37
LMNA-217ENST00000498722 NEXMIFQ5QGS0 1516 aa23.62■■□□□ 1.37
LMNA-217ENST00000498722 PLEKHG1Q9ULL1 1385 aa23.62■■□□□ 1.37
LMNA-217ENST00000498722 SLC26A8Q96RN1 970 aa23.61■■□□□ 1.37
LMNA-217ENST00000498722 RGL3Q3MIN7 710 aa23.58■■□□□ 1.36
LMNA-217ENST00000498722 CPS1P31327 1500 aa23.57■■□□□ 1.36
LMNA-217ENST00000498722 IFT172Q9UG01 1749 aa23.57■■□□□ 1.36
LMNA-217ENST00000498722 CHD2O14647 1828 aaKnown RBP23.55■■□□□ 1.36
LMNA-217ENST00000498722 DIP2AQ14689 1571 aa23.55■■□□□ 1.36
LMNA-217ENST00000498722 ANKRD30BQ9BXX2 1392 aa23.55■■□□□ 1.36
LMNA-217ENST00000498722 NRXN3Q9Y4C0 1643 aa23.53■■□□□ 1.36
LMNA-217ENST00000498722 SPATA31E1Q6ZUB1 1445 aa23.53■■□□□ 1.36
LMNA-217ENST00000498722 RPGRIP1LQ68CZ1 1315 aa23.53■■□□□ 1.36
LMNA-217ENST00000498722 SETBP1Q9Y6X0 1596 aa23.52■■□□□ 1.36
LMNA-217ENST00000498722 VGFO15240 615 aaPredicted RBP23.51■■□□□ 1.35
LMNA-217ENST00000498722 ADAMTS13Q76LX8 1427 aa23.5■■□□□ 1.35
LMNA-217ENST00000498722 XIRP1Q702N8 1843 aaKnown RBP23.48■■□□□ 1.35
LMNA-217ENST00000498722 IQSEC2Q5JU85 1478 aa23.48■■□□□ 1.35
LMNA-217ENST00000498722 NWD1Q149M9 1564 aa23.47■■□□□ 1.35
LMNA-217ENST00000498722 TBX22Q9Y458 520 aa23.47■■□□□ 1.35
LMNA-217ENST00000498722 LRRC7Q96NW7 1537 aa23.45■■□□□ 1.34
LMNA-217ENST00000498722 KCNA6P17658 529 aa23.45■■□□□ 1.34
LMNA-217ENST00000498722 CLSPNQ9HAW4 1339 aa23.44■■□□□ 1.34
LMNA-217ENST00000498722 SETD1AO15047 1707 aaKnown RBP23.44■■□□□ 1.34
LMNA-217ENST00000498722 NKTRP30414 1462 aaKnown RBP23.42■■□□□ 1.34
LMNA-217ENST00000498722 ALKQ9UM73 1620 aa23.42■■□□□ 1.34
LMNA-217ENST00000498722 DHX57Q6P158 1386 aaKnown RBP23.4■■□□□ 1.34
LMNA-217ENST00000498722 PROSER2Q86WR7 435 aaPredicted RBP23.4■■□□□ 1.34
LMNA-217ENST00000498722 ADGRF5Q8IZF2 1346 aa23.4■■□□□ 1.34
LMNA-217ENST00000498722 PIK3R4Q99570 1358 aa23.4■■□□□ 1.34
LMNA-217ENST00000498722 XRN1Q8IZH2 1706 aaKnown RBP23.38■■□□□ 1.33
LMNA-217ENST00000498722 METP08581 1390 aa23.38■■□□□ 1.33
LMNA-217ENST00000498722 UBAP1LF5GYI3 381 aa23.37■■□□□ 1.33
LMNA-217ENST00000498722 MYOM2P54296 1465 aa23.36■■□□□ 1.33
LMNA-217ENST00000498722 RBM33Q96EV2 1170 aaKnown RBP23.36■■□□□ 1.33
LMNA-217ENST00000498722 AMOTL2Q9Y2J4 779 aa23.35■■□□□ 1.33
LMNA-217ENST00000498722 KDM2AQ9Y2K7 1162 aa23.35■■□□□ 1.33
LMNA-217ENST00000498722 TMEM94Q12767 1356 aa23.35■■□□□ 1.33
LMNA-217ENST00000498722 PTPRUQ92729 1446 aa23.35■■□□□ 1.33
LMNA-217ENST00000498722 LAMC1P11047 1609 aa23.34■■□□□ 1.33
LMNA-217ENST00000498722 DCAF11Q8TEB1 546 aa23.34■■□□□ 1.33
LMNA-217ENST00000498722 PIK3C2GO75747 1445 aa23.33■■□□□ 1.33
LMNA-217ENST00000498722 C14orf37Q86TY3 774 aa23.33■■□□□ 1.32
LMNA-217ENST00000498722 SCAF1Q9H7N4 1312 aaKnown RBP23.32■■□□□ 1.32
LMNA-217ENST00000498722 NEUROD1Q13562 356 aa23.32■■□□□ 1.32
LMNA-217ENST00000498722 TOM1O60784 492 aa23.31■■□□□ 1.32
LMNA-217ENST00000498722 SIN3AQ96ST3 1273 aa23.3■■□□□ 1.32
LMNA-217ENST00000498722 NRXN1Q9ULB1 1477 aa23.29■■□□□ 1.32
LMNA-217ENST00000498722 PIP4K2BP78356 416 aa23.28■■□□□ 1.32
LMNA-217ENST00000498722 MSH6P52701 1360 aa23.27■■□□□ 1.32
LMNA-217ENST00000498722 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.26■■□□□ 1.31
LMNA-217ENST00000498722 KNDC1Q76NI1 1749 aa23.24■■□□□ 1.31
LMNA-217ENST00000498722 ASXL1Q8IXJ9 1541 aa23.24■■□□□ 1.31
LMNA-217ENST00000498722 CFAP70Q5T0N1 1121 aa23.24■■□□□ 1.31
LMNA-217ENST00000498722 TMEM132EQ6IEE7 984 aa23.24■■□□□ 1.31
LMNA-217ENST00000498722 STK26Q9P289 416 aa23.24■■□□□ 1.31
LMNA-217ENST00000498722 NALCNQ8IZF0 1738 aa23.24■■□□□ 1.31
LMNA-217ENST00000498722 STAC3Q96MF2 364 aa23.23■■□□□ 1.31
LMNA-217ENST00000498722 C14orf93Q9H972 538 aaKnown RBP23.22■■□□□ 1.31
LMNA-217ENST00000498722 PTCH1Q13635 1447 aa23.2■■□□□ 1.31
LMNA-217ENST00000498722 NCOA3Q9Y6Q9 1424 aa23.2■■□□□ 1.31
LMNA-217ENST00000498722 ROBO2Q9HCK4 1378 aa23.19■■□□□ 1.3
LMNA-217ENST00000498722 YTHDC2Q9H6S0 1430 aaKnown RBP23.19■■□□□ 1.3
LMNA-217ENST00000498722 KIAA1210Q9ULL0 1709 aa23.18■■□□□ 1.3
LMNA-217ENST00000498722 LRPPRCP42704 1394 aaKnown RBP23.17■■□□□ 1.3
LMNA-217ENST00000498722 L3MBTL2Q969R5 705 aa23.17■■□□□ 1.3
LMNA-217ENST00000498722 ATF3P18847 181 aa23.16■■□□□ 1.3
LMNA-217ENST00000498722 C19orf44Q9H6X5 657 aa23.16■■□□□ 1.3
LMNA-217ENST00000498722 ROBO1Q9Y6N7 1651 aa23.15■■□□□ 1.3
LMNA-217ENST00000498722 PRAG1Q86YV5 1406 aa23.14■■□□□ 1.3
LMNA-217ENST00000498722 ADGRL3Q9HAR2 1447 aa23.14■■□□□ 1.3
LMNA-217ENST00000498722 TONSLQ96HA7 1378 aa23.14■■□□□ 1.29
LMNA-217ENST00000498722 ADGRB1O14514 1584 aa23.14■■□□□ 1.29
LMNA-217ENST00000498722 TECPR2O15040 1411 aa23.13■■□□□ 1.29
LMNA-217ENST00000498722 ABCC11Q96J66 1382 aa23.13■■□□□ 1.29
LMNA-217ENST00000498722 CADPS2Q86UW7 1296 aa23.12■■□□□ 1.29
LMNA-217ENST00000498722 WAPLQ7Z5K2 1190 aa23.1■■□□□ 1.29
LMNA-217ENST00000498722 SLAIN2Q9P270 581 aa23.1■■□□□ 1.29
LMNA-217ENST00000498722 DCCP43146 1447 aa23.1■■□□□ 1.29
LMNA-217ENST00000498722 ARHGEF28Q8N1W1 1705 aaKnown RBP23.09■■□□□ 1.29
LMNA-217ENST00000498722 TRPM1Q7Z4N2 1603 aa23.08■■□□□ 1.29
LMNA-217ENST00000498722 TRAK1Q9UPV9 953 aa23.08■■□□□ 1.28
LMNA-217ENST00000498722 PLEKHH1Q9ULM0 1364 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms