RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 ERVK-7P63135 1459 aa29.42■■■□□ 2.3
CTSD-206ENST00000497544 NLRP1Q9C000 1473 aa29.39■■■□□ 2.3
CTSD-206ENST00000497544 NOS1P29475 1434 aa29.37■■■□□ 2.29
CTSD-206ENST00000497544 UPF1Q92900 1129 aaKnown RBP eCLIP29.34■■■□□ 2.298e-13■■■■■ 27.5
CTSD-206ENST00000497544 FAM135BQ49AJ0 1406 aa29.34■■■□□ 2.29
CTSD-206ENST00000497544 SLC52A1Q9NWF4 448 aa29.33■■■□□ 2.29
CTSD-206ENST00000497544 DHX57Q6P158 1386 aaKnown RBP29.32■■■□□ 2.28
CTSD-206ENST00000497544 SPHKAPQ2M3C7 1700 aa29.31■■■□□ 2.28
CTSD-206ENST00000497544 IDI1Q13907 227 aa29.3■■■□□ 2.28
CTSD-206ENST00000497544 ROBO1Q9Y6N7 1651 aa29.29■■■□□ 2.28
CTSD-206ENST00000497544 STAG3Q9UJ98 1225 aa29.27■■■□□ 2.28
CTSD-206ENST00000497544 ANKRD30BQ9BXX2 1392 aa29.25■■■□□ 2.27
CTSD-206ENST00000497544 CHGAP10645 457 aaKnown RBP29.24■■■□□ 2.27
CTSD-206ENST00000497544 SRCAPQ6ZRS2 3230 aa29.23■■■□□ 2.27
CTSD-206ENST00000497544 TRPM2O94759 1503 aa29.23■■■□□ 2.27
CTSD-206ENST00000497544 CCDC144AA2RUR9 1427 aa29.21■■■□□ 2.27
CTSD-206ENST00000497544 PIK3C2BO00750 1634 aa29.17■■■□□ 2.26
CTSD-206ENST00000497544 UBR1Q8IWV7 1749 aa29.17■■■□□ 2.26
CTSD-206ENST00000497544 CLTCL1P53675 1640 aa29.16■■■□□ 2.26
CTSD-206ENST00000497544 CCER1Q8TC90 406 aaPredicted RBP29.16■■■□□ 2.26
CTSD-206ENST00000497544 SCAF11Q99590 1463 aaKnown RBP29.14■■■□□ 2.26
CTSD-206ENST00000497544 PHLPP1O60346 1717 aa29.14■■■□□ 2.25
CTSD-206ENST00000497544 KIF1BO60333 1816 aa29.13■■■□□ 2.25
CTSD-206ENST00000497544 ZNF326Q5BKZ1 582 aaKnown RBP29.1■■■□□ 2.25
CTSD-206ENST00000497544 NEUROD1Q13562 356 aa29.08■■■□□ 2.25
CTSD-206ENST00000497544 SIN3AQ96ST3 1273 aa29.08■■■□□ 2.25
CTSD-206ENST00000497544 ADGRB3O60242 1522 aa29.08■■■□□ 2.25
CTSD-206ENST00000497544 TMEM131LA2VDJ0 1609 aa29.07■■■□□ 2.24
CTSD-206ENST00000497544 RGL3Q3MIN7 710 aa29.07■■■□□ 2.24
CTSD-206ENST00000497544 MYO5BQ9ULV0 1848 aa29.06■■■□□ 2.24
CTSD-206ENST00000497544 KDM5AP29375 1690 aaKnown RBP29.06■■■□□ 2.24
CTSD-206ENST00000497544 TMEM94Q12767 1356 aa29.06■■■□□ 2.24
CTSD-206ENST00000497544 JCADQ9P266 1359 aa29.06■■■□□ 2.24
CTSD-206ENST00000497544 LRP6O75581 1613 aa29.05■■■□□ 2.24
CTSD-206ENST00000497544 LTKP29376 864 aa29.05■■■□□ 2.24
CTSD-206ENST00000497544 HDGFP51858 240 aaKnown RBP29.05■■■□□ 2.24
CTSD-206ENST00000497544 ARHGAP23Q9P227 1491 aa29.04■■■□□ 2.24
CTSD-206ENST00000497544 CLSPNQ9HAW4 1339 aa29.04■■■□□ 2.24
CTSD-206ENST00000497544 SLIT1O75093 1534 aa29.03■■■□□ 2.24
CTSD-206ENST00000497544 EID1Q9Y6B2 187 aa29.01■■■□□ 2.23
CTSD-206ENST00000497544 TMEM2Q9UHN6 1383 aa29.01■■■□□ 2.23
CTSD-206ENST00000497544 TXNDC2Q86VQ3 553 aa29■■■□□ 2.23
CTSD-206ENST00000497544 COL16A1Q07092 1604 aaPredicted RBP29■■■□□ 2.23
CTSD-206ENST00000497544 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.99■■■□□ 2.23
CTSD-206ENST00000497544 RPGRIP1LQ68CZ1 1315 aa28.98■■■□□ 2.23
CTSD-206ENST00000497544 SPATA31E1Q6ZUB1 1445 aa28.98■■■□□ 2.23
CTSD-206ENST00000497544 ZNF772Q68DY9 489 aaPredicted RBP28.98■■■□□ 2.23
CTSD-206ENST00000497544 RIMS2Q9UQ26 1411 aa28.95■■■□□ 2.23
CTSD-206ENST00000497544 PPP1R15AO75807 674 aaPredicted RBP28.95■■■□□ 2.22
CTSD-206ENST00000497544 NUTM2DQ5VT03 806 aaPredicted RBP28.95■■■□□ 2.22
CTSD-206ENST00000497544 RBM33Q96EV2 1170 aaKnown RBP28.94■■■□□ 2.22
CTSD-206ENST00000497544 CDK12Q9NYV4 1490 aaPredicted RBP28.92■■■□□ 2.22
CTSD-206ENST00000497544 VGFO15240 615 aaPredicted RBP28.91■■■□□ 2.22
CTSD-206ENST00000497544 MEX3CQ5U5Q3 659 aaKnown RBP28.9■■■□□ 2.22
CTSD-206ENST00000497544 ZFYVE9O95405 1425 aa28.89■■■□□ 2.22
CTSD-206ENST00000497544 RXRBP28702 533 aa28.89■■■□□ 2.22
CTSD-206ENST00000497544 DCAF11Q8TEB1 546 aa28.89■■■□□ 2.22
CTSD-206ENST00000497544 PROSER2Q86WR7 435 aaPredicted RBP28.88■■■□□ 2.21
CTSD-206ENST00000497544 BCANQ96GW7 911 aa28.88■■■□□ 2.21
CTSD-206ENST00000497544 KDM2AQ9Y2K7 1162 aa28.88■■■□□ 2.21
CTSD-206ENST00000497544 SPATA31A6Q5VVP1 1343 aa28.88■■■□□ 2.21
CTSD-206ENST00000497544 KCNA6P17658 529 aa28.87■■■□□ 2.21
CTSD-206ENST00000497544 SHPRHQ149N8 1683 aa28.86■■■□□ 2.21
CTSD-206ENST00000497544 NEXMIFQ5QGS0 1516 aa28.86■■■□□ 2.21
CTSD-206ENST00000497544 STAC3Q96MF2 364 aa28.86■■■□□ 2.21
CTSD-206ENST00000497544 TONSLQ96HA7 1378 aa28.86■■■□□ 2.21
CTSD-206ENST00000497544 NWD1Q149M9 1564 aa28.85■■■□□ 2.21
CTSD-206ENST00000497544 L3MBTL2Q969R5 705 aa28.85■■■□□ 2.21
CTSD-206ENST00000497544 SLAIN2Q9P270 581 aa28.85■■■□□ 2.21
CTSD-206ENST00000497544 PPLO60437 1756 aa28.84■■■□□ 2.21
CTSD-206ENST00000497544 MSH6P52701 1360 aa28.83■■■□□ 2.21
CTSD-206ENST00000497544 NKTRP30414 1462 aaKnown RBP28.83■■■□□ 2.21
CTSD-206ENST00000497544 PLEKHG1Q9ULL1 1385 aa28.79■■■□□ 2.2
CTSD-206ENST00000497544 ADGRF5Q8IZF2 1346 aa28.79■■■□□ 2.2
CTSD-206ENST00000497544 IFT172Q9UG01 1749 aa28.78■■■□□ 2.2
CTSD-206ENST00000497544 TIMELESSQ9UNS1 1208 aa28.78■■■□□ 2.2
CTSD-206ENST00000497544 RGS12O14924 1447 aa28.76■■■□□ 2.19
CTSD-206ENST00000497544 SLC26A8Q96RN1 970 aa28.75■■■□□ 2.19
CTSD-206ENST00000497544 AHDC1Q5TGY3 1603 aaPredicted RBP28.74■■■□□ 2.19
CTSD-206ENST00000497544 MYOM2P54296 1465 aa28.73■■■□□ 2.19
CTSD-206ENST00000497544 SETBP1Q9Y6X0 1596 aa28.72■■■□□ 2.19
CTSD-206ENST00000497544 TBX22Q9Y458 520 aa28.69■■■□□ 2.18
CTSD-206ENST00000497544 DIP2AQ14689 1571 aa28.68■■■□□ 2.18
CTSD-206ENST00000497544 AFF2P51816 1311 aa28.68■■■□□ 2.18
CTSD-206ENST00000497544 CHD2O14647 1828 aaKnown RBP28.66■■■□□ 2.18
CTSD-206ENST00000497544 NRXN1Q9ULB1 1477 aa28.66■■■□□ 2.18
CTSD-206ENST00000497544 PIK3C2GO75747 1445 aa28.65■■■□□ 2.18
CTSD-206ENST00000497544 ADAMTS13Q76LX8 1427 aa28.64■■■□□ 2.18
CTSD-206ENST00000497544 CFAP70Q5T0N1 1121 aa28.64■■■□□ 2.18
CTSD-206ENST00000497544 C14orf93Q9H972 538 aaKnown RBP28.64■■■□□ 2.18
CTSD-206ENST00000497544 NUTM2BA6NNL0 878 aaPredicted RBP28.63■■■□□ 2.17
CTSD-206ENST00000497544 NUTM2EB1AL46 878 aaPredicted RBP28.63■■■□□ 2.17
CTSD-206ENST00000497544 NUTM2AQ8IVF1 878 aaPredicted RBP28.63■■■□□ 2.17
CTSD-206ENST00000497544 ZRANB1Q9UGI0 708 aa28.62■■■□□ 2.17
CTSD-206ENST00000497544 PRAG1Q86YV5 1406 aa28.61■■■□□ 2.17
CTSD-206ENST00000497544 NRXN3Q9Y4C0 1643 aa28.61■■■□□ 2.17
CTSD-206ENST00000497544 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.58■■■□□ 2.17
CTSD-206ENST00000497544 NBPF8Q3BBV2 869 aa28.58■■■□□ 2.17
CTSD-206ENST00000497544 RBM6P78332 1123 aaKnown RBP28.56■■■□□ 2.16
CTSD-206ENST00000497544 TMEM132EQ6IEE7 984 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms