RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 LTKP29376 864 aa21.09■□□□□ 0.97
USP11-212ENST00000497179 ZNF326Q5BKZ1 582 aaKnown RBP21.09■□□□□ 0.97
USP11-212ENST00000497179 EID1Q9Y6B2 187 aa21.09■□□□□ 0.97
USP11-212ENST00000497179 IFT172Q9UG01 1749 aa21.09■□□□□ 0.97
USP11-212ENST00000497179 PPLO60437 1756 aa21.08■□□□□ 0.97
USP11-212ENST00000497179 TXNDC2Q86VQ3 553 aa21.08■□□□□ 0.97
USP11-212ENST00000497179 RPGRIP1LQ68CZ1 1315 aa21.07■□□□□ 0.96
USP11-212ENST00000497179 NPHP4O75161 1426 aaPredicted RBP21.07■□□□□ 0.96
USP11-212ENST00000497179 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.07■□□□□ 0.96
USP11-212ENST00000497179 IQGAP1P46940 1657 aa21.07■□□□□ 0.96
USP11-212ENST00000497179 HDGFP51858 240 aaKnown RBP21.06■□□□□ 0.96
USP11-212ENST00000497179 PLEKHG1Q9ULL1 1385 aa21.04■□□□□ 0.96
USP11-212ENST00000497179 RGL3Q3MIN7 710 aa21.03■□□□□ 0.96
USP11-212ENST00000497179 DMRT2Q9Y5R5 561 aa21.03■□□□□ 0.96
USP11-212ENST00000497179 CLSPNQ9HAW4 1339 aa21.03■□□□□ 0.96
USP11-212ENST00000497179 PPP1R15AO75807 674 aaPredicted RBP21.02■□□□□ 0.96
USP11-212ENST00000497179 SIN3AQ96ST3 1273 aa21.02■□□□□ 0.96
USP11-212ENST00000497179 MYOM2P54296 1465 aa21.01■□□□□ 0.95
USP11-212ENST00000497179 SETBP1Q9Y6X0 1596 aa21.01■□□□□ 0.95
USP11-212ENST00000497179 NUTM2DQ5VT03 806 aaPredicted RBP21■□□□□ 0.95
USP11-212ENST00000497179 NRXN3Q9Y4C0 1643 aa20.99■□□□□ 0.95
USP11-212ENST00000497179 DIP2AQ14689 1571 aa20.98■□□□□ 0.95
USP11-212ENST00000497179 VGFO15240 615 aaPredicted RBP20.98■□□□□ 0.95
USP11-212ENST00000497179 NRXN1Q9ULB1 1477 aa20.97■□□□□ 0.95
USP11-212ENST00000497179 NEUROD1Q13562 356 aa20.96■□□□□ 0.95
USP11-212ENST00000497179 CCER1Q8TC90 406 aaPredicted RBP20.96■□□□□ 0.95
USP11-212ENST00000497179 ADAMTS13Q76LX8 1427 aa20.95■□□□□ 0.95
USP11-212ENST00000497179 ADGRF5Q8IZF2 1346 aa20.94■□□□□ 0.94
USP11-212ENST00000497179 PIK3C2GO75747 1445 aa20.94■□□□□ 0.94
USP11-212ENST00000497179 STAC3Q96MF2 364 aa20.93■□□□□ 0.94
USP11-212ENST00000497179 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
USP11-212ENST00000497179 DCAF11Q8TEB1 546 aa20.91■□□□□ 0.94
USP11-212ENST00000497179 BCANQ96GW7 911 aa20.91■□□□□ 0.94
USP11-212ENST00000497179 SLC26A8Q96RN1 970 aa20.9■□□□□ 0.94
USP11-212ENST00000497179 LAMC1P11047 1609 aa20.89■□□□□ 0.94
USP11-212ENST00000497179 ALKQ9UM73 1620 aa20.89■□□□□ 0.94
USP11-212ENST00000497179 TONSLQ96HA7 1378 aa20.89■□□□□ 0.93
USP11-212ENST00000497179 L3MBTL2Q969R5 705 aa20.89■□□□□ 0.93
USP11-212ENST00000497179 SENP3Q9H4L4 574 aaPredicted RBP20.89■□□□□ 0.93
USP11-212ENST00000497179 TBX22Q9Y458 520 aa20.89■□□□□ 0.93
USP11-212ENST00000497179 PIK3R4Q99570 1358 aa20.87■□□□□ 0.93
USP11-212ENST00000497179 NWD1Q149M9 1564 aa20.87■□□□□ 0.93
USP11-212ENST00000497179 KDM2AQ9Y2K7 1162 aa20.86■□□□□ 0.93
USP11-212ENST00000497179 PRAG1Q86YV5 1406 aa20.86■□□□□ 0.93
USP11-212ENST00000497179 ZNF335Q9H4Z2 1342 aaPredicted RBP20.84■□□□□ 0.93
USP11-212ENST00000497179 LTBP4Q8N2S1 1624 aa20.84■□□□□ 0.93
USP11-212ENST00000497179 ASXL1Q8IXJ9 1541 aa20.83■□□□□ 0.93
USP11-212ENST00000497179 STRCP1A6NGW2 1772 aa20.83■□□□□ 0.93
USP11-212ENST00000497179 METP08581 1390 aa20.83■□□□□ 0.92
USP11-212ENST00000497179 CHD2O14647 1828 aaKnown RBP20.83■□□□□ 0.92
USP11-212ENST00000497179 XRN1Q8IZH2 1706 aaKnown RBP20.81■□□□□ 0.92
USP11-212ENST00000497179 KIAA1210Q9ULL0 1709 aa20.81■□□□□ 0.92
USP11-212ENST00000497179 C14orf93Q9H972 538 aaKnown RBP20.81■□□□□ 0.92
USP11-212ENST00000497179 TIMELESSQ9UNS1 1208 aa20.81■□□□□ 0.92
USP11-212ENST00000497179 CPS1P31327 1500 aa20.81■□□□□ 0.92
USP11-212ENST00000497179 NKTRP30414 1462 aaKnown RBP20.81■□□□□ 0.92
USP11-212ENST00000497179 PTPRUQ92729 1446 aa20.8■□□□□ 0.92
USP11-212ENST00000497179 KCNA6P17658 529 aa20.79■□□□□ 0.92
USP11-212ENST00000497179 ADGRB1O14514 1584 aa20.79■□□□□ 0.92
USP11-212ENST00000497179 CFAP70Q5T0N1 1121 aa20.78■□□□□ 0.92
USP11-212ENST00000497179 TRPM1Q7Z4N2 1603 aa20.77■□□□□ 0.92
USP11-212ENST00000497179 KNDC1Q76NI1 1749 aa20.75■□□□□ 0.91
USP11-212ENST00000497179 LRPPRCP42704 1394 aaKnown RBP20.74■□□□□ 0.91
USP11-212ENST00000497179 LRRC7Q96NW7 1537 aa20.73■□□□□ 0.91
USP11-212ENST00000497179 TECPR2O15040 1411 aa20.73■□□□□ 0.91
USP11-212ENST00000497179 PTCH1Q13635 1447 aa20.73■□□□□ 0.91
USP11-212ENST00000497179 YTHDC2Q9H6S0 1430 aaKnown RBP20.73■□□□□ 0.91
USP11-212ENST00000497179 AMOTL2Q9Y2J4 779 aa20.73■□□□□ 0.91
USP11-212ENST00000497179 NBPF8Q3BBV2 869 aa20.72■□□□□ 0.91
USP11-212ENST00000497179 TMEM132EQ6IEE7 984 aa20.72■□□□□ 0.91
USP11-212ENST00000497179 RALGAPBQ86X10 1494 aa20.71■□□□□ 0.91
USP11-212ENST00000497179 ABCC11Q96J66 1382 aa20.7■□□□□ 0.9
USP11-212ENST00000497179 IQSEC2Q5JU85 1478 aa20.69■□□□□ 0.9
USP11-212ENST00000497179 DLC1Q96QB1 1528 aa20.68■□□□□ 0.9
USP11-212ENST00000497179 XIRP1Q702N8 1843 aaKnown RBP20.67■□□□□ 0.9
USP11-212ENST00000497179 NBPF1Q3BBV0 1214 aa20.67■□□□□ 0.9
USP11-212ENST00000497179 TMEM94Q12767 1356 aa20.67■□□□□ 0.9
USP11-212ENST00000497179 GPRASP1Q5JY77 1395 aa20.67■□□□□ 0.9
USP11-212ENST00000497179 ROBO2Q9HCK4 1378 aa20.67■□□□□ 0.9
USP11-212ENST00000497179 PROSER2Q86WR7 435 aaPredicted RBP20.66■□□□□ 0.9
USP11-212ENST00000497179 STK26Q9P289 416 aa20.66■□□□□ 0.9
USP11-212ENST00000497179 NCOA3Q9Y6Q9 1424 aa20.66■□□□□ 0.9
USP11-212ENST00000497179 FAM135BQ49AJ0 1406 aa20.65■□□□□ 0.9
USP11-212ENST00000497179 ROCK2O75116 1388 aaKnown RBP20.65■□□□□ 0.9
USP11-212ENST00000497179 CERKQ8TCT0 537 aa20.65■□□□□ 0.9
USP11-212ENST00000497179 ARHGEF28Q8N1W1 1705 aaKnown RBP20.64■□□□□ 0.89
USP11-212ENST00000497179 SIRT1Q96EB6 747 aa20.63■□□□□ 0.89
USP11-212ENST00000497179 NALCNQ8IZF0 1738 aa20.61■□□□□ 0.89
USP11-212ENST00000497179 ADGRL3Q9HAR2 1447 aa20.6■□□□□ 0.89
USP11-212ENST00000497179 RBM33Q96EV2 1170 aaKnown RBP20.59■□□□□ 0.89
USP11-212ENST00000497179 TRAK1Q9UPV9 953 aa20.59■□□□□ 0.89
USP11-212ENST00000497179 PLEKHH1Q9ULM0 1364 aa20.59■□□□□ 0.89
USP11-212ENST00000497179 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.56■□□□□ 0.88
USP11-212ENST00000497179 WAPLQ7Z5K2 1190 aa20.56■□□□□ 0.88
USP11-212ENST00000497179 PRAM1Q96QH2 718 aa20.56■□□□□ 0.88
USP11-212ENST00000497179 CARD11Q9BXL7 1154 aa20.56■□□□□ 0.88
USP11-212ENST00000497179 MSH6P52701 1360 aa20.56■□□□□ 0.88
USP11-212ENST00000497179 DCCP43146 1447 aa20.55■□□□□ 0.88
USP11-212ENST00000497179 CDC42BPGQ6DT37 1551 aa20.55■□□□□ 0.88
USP11-212ENST00000497179 C14orf37Q86TY3 774 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms