RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 SPATA31E1Q6ZUB1 1445 aa22.99■■□□□ 1.27
PMF1-205ENST00000497069 SCAF11Q99590 1463 aaKnown RBP22.99■■□□□ 1.27
PMF1-205ENST00000497069 MYO5BQ9ULV0 1848 aa22.99■■□□□ 1.27
PMF1-205ENST00000497069 NEURL4Q96JN8 1562 aa22.98■■□□□ 1.27
PMF1-205ENST00000497069 LTKP29376 864 aa22.98■■□□□ 1.27
PMF1-205ENST00000497069 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
PMF1-205ENST00000497069 SIN3AQ96ST3 1273 aa22.98■■□□□ 1.27
PMF1-205ENST00000497069 DMRT2Q9Y5R5 561 aa22.98■■□□□ 1.27
PMF1-205ENST00000497069 ZFYVE9O95405 1425 aa22.98■■□□□ 1.27
PMF1-205ENST00000497069 NUTM2DQ5VT03 806 aaPredicted RBP22.96■■□□□ 1.27
PMF1-205ENST00000497069 BCANQ96GW7 911 aa22.96■■□□□ 1.27
PMF1-205ENST00000497069 POLR1AO95602 1720 aaPredicted RBP22.95■■□□□ 1.26
PMF1-205ENST00000497069 CLSPNQ9HAW4 1339 aa22.95■■□□□ 1.26
PMF1-205ENST00000497069 NPHP4O75161 1426 aaPredicted RBP22.93■■□□□ 1.26
PMF1-205ENST00000497069 VGFO15240 615 aaPredicted RBP22.93■■□□□ 1.26
PMF1-205ENST00000497069 STRCQ7RTU9 1775 aa22.93■■□□□ 1.26
PMF1-205ENST00000497069 NEXMIFQ5QGS0 1516 aa22.92■■□□□ 1.26
PMF1-205ENST00000497069 MED14O60244 1454 aa22.92■■□□□ 1.26
PMF1-205ENST00000497069 PLEKHG1Q9ULL1 1385 aa22.9■■□□□ 1.26
PMF1-205ENST00000497069 SENP3Q9H4L4 574 aaPredicted RBP22.89■■□□□ 1.25
PMF1-205ENST00000497069 DCAF11Q8TEB1 546 aa22.88■■□□□ 1.25
PMF1-205ENST00000497069 STAC3Q96MF2 364 aa22.86■■□□□ 1.25
PMF1-205ENST00000497069 IQGAP1P46940 1657 aa22.86■■□□□ 1.25
PMF1-205ENST00000497069 PPLO60437 1756 aa22.86■■□□□ 1.25
PMF1-205ENST00000497069 KDM2AQ9Y2K7 1162 aa22.85■■□□□ 1.25
PMF1-205ENST00000497069 TONSLQ96HA7 1378 aa22.85■■□□□ 1.25
PMF1-205ENST00000497069 SLC26A8Q96RN1 970 aa22.83■■□□□ 1.25
PMF1-205ENST00000497069 ADGRF5Q8IZF2 1346 aa22.82■■□□□ 1.24
PMF1-205ENST00000497069 IFT172Q9UG01 1749 aa22.82■■□□□ 1.24
PMF1-205ENST00000497069 MYOM2P54296 1465 aa22.82■■□□□ 1.24
PMF1-205ENST00000497069 L3MBTL2Q969R5 705 aa22.82■■□□□ 1.24
PMF1-205ENST00000497069 TBX22Q9Y458 520 aa22.79■■□□□ 1.24
PMF1-205ENST00000497069 SETBP1Q9Y6X0 1596 aa22.79■■□□□ 1.24
PMF1-205ENST00000497069 DIP2AQ14689 1571 aa22.77■■□□□ 1.24
PMF1-205ENST00000497069 ADAMTS13Q76LX8 1427 aa22.77■■□□□ 1.24
PMF1-205ENST00000497069 PIK3C2GO75747 1445 aa22.75■■□□□ 1.23
PMF1-205ENST00000497069 NRXN1Q9ULB1 1477 aa22.75■■□□□ 1.23
PMF1-205ENST00000497069 TIMELESSQ9UNS1 1208 aa22.74■■□□□ 1.23
PMF1-205ENST00000497069 NRXN3Q9Y4C0 1643 aa22.73■■□□□ 1.23
PMF1-205ENST00000497069 ALKQ9UM73 1620 aa22.71■■□□□ 1.23
PMF1-205ENST00000497069 ZNF335Q9H4Z2 1342 aaPredicted RBP22.71■■□□□ 1.23
PMF1-205ENST00000497069 PIK3R4Q99570 1358 aa22.71■■□□□ 1.23
PMF1-205ENST00000497069 CFAP70Q5T0N1 1121 aa22.7■■□□□ 1.22
PMF1-205ENST00000497069 C14orf93Q9H972 538 aaKnown RBP22.7■■□□□ 1.22
PMF1-205ENST00000497069 PRAG1Q86YV5 1406 aa22.69■■□□□ 1.22
PMF1-205ENST00000497069 METP08581 1390 aa22.68■■□□□ 1.22
PMF1-205ENST00000497069 KCNA6P17658 529 aa22.68■■□□□ 1.22
PMF1-205ENST00000497069 LAMC1P11047 1609 aa22.67■■□□□ 1.22
PMF1-205ENST00000497069 AMOTL2Q9Y2J4 779 aa22.65■■□□□ 1.22
PMF1-205ENST00000497069 TMEM132EQ6IEE7 984 aa22.64■■□□□ 1.21
PMF1-205ENST00000497069 SETD1AO15047 1707 aaKnown RBP22.62■■□□□ 1.21
PMF1-205ENST00000497069 PTPRUQ92729 1446 aa22.61■■□□□ 1.21
PMF1-205ENST00000497069 CPS1P31327 1500 aa22.61■■□□□ 1.21
PMF1-205ENST00000497069 NWD1Q149M9 1564 aa22.6■■□□□ 1.21
PMF1-205ENST00000497069 NBPF8Q3BBV2 869 aa22.6■■□□□ 1.21
PMF1-205ENST00000497069 STK26Q9P289 416 aa22.6■■□□□ 1.21
PMF1-205ENST00000497069 CHD2O14647 1828 aaKnown RBP22.59■■□□□ 1.21
PMF1-205ENST00000497069 KIAA1210Q9ULL0 1709 aa22.59■■□□□ 1.21
PMF1-205ENST00000497069 NKTRP30414 1462 aaKnown RBP22.59■■□□□ 1.21
PMF1-205ENST00000497069 LTBP4Q8N2S1 1624 aa22.58■■□□□ 1.21
PMF1-205ENST00000497069 PROSER2Q86WR7 435 aaPredicted RBP22.58■■□□□ 1.21
PMF1-205ENST00000497069 LRPPRCP42704 1394 aaKnown RBP22.58■■□□□ 1.21
PMF1-205ENST00000497069 YTHDC2Q9H6S0 1430 aaKnown RBP22.57■■□□□ 1.2
PMF1-205ENST00000497069 ASXL1Q8IXJ9 1541 aa22.57■■□□□ 1.2
PMF1-205ENST00000497069 ROCK2O75116 1388 aaKnown RBP22.56■■□□□ 1.2
PMF1-205ENST00000497069 NBPF1Q3BBV0 1214 aa22.56■■□□□ 1.2
PMF1-205ENST00000497069 STRCP1A6NGW2 1772 aa22.55■■□□□ 1.2
PMF1-205ENST00000497069 ADGRB1O14514 1584 aa22.55■■□□□ 1.2
PMF1-205ENST00000497069 XRN1Q8IZH2 1706 aaKnown RBP22.54■■□□□ 1.2
PMF1-205ENST00000497069 TRPM1Q7Z4N2 1603 aa22.54■■□□□ 1.2
PMF1-205ENST00000497069 ABCC11Q96J66 1382 aa22.54■■□□□ 1.2
PMF1-205ENST00000497069 TRAK1Q9UPV9 953 aa22.53■■□□□ 1.2
PMF1-205ENST00000497069 LRRC7Q96NW7 1537 aa22.52■■□□□ 1.2
PMF1-205ENST00000497069 PTCH1Q13635 1447 aa22.52■■□□□ 1.2
PMF1-205ENST00000497069 RALGAPBQ86X10 1494 aa22.52■■□□□ 1.2
PMF1-205ENST00000497069 C14orf37Q86TY3 774 aa22.51■■□□□ 1.19
PMF1-205ENST00000497069 CERKQ8TCT0 537 aa22.51■■□□□ 1.19
PMF1-205ENST00000497069 TMEM94Q12767 1356 aa22.5■■□□□ 1.19
PMF1-205ENST00000497069 ROBO2Q9HCK4 1378 aa22.5■■□□□ 1.19
PMF1-205ENST00000497069 TECPR2O15040 1411 aa22.5■■□□□ 1.19
PMF1-205ENST00000497069 RBM33Q96EV2 1170 aaKnown RBP22.5■■□□□ 1.19
PMF1-205ENST00000497069 CARD11Q9BXL7 1154 aa22.5■■□□□ 1.19
PMF1-205ENST00000497069 SIRT1Q96EB6 747 aa22.49■■□□□ 1.19
PMF1-205ENST00000497069 POGKQ9P215 609 aa22.48■■□□□ 1.19
PMF1-205ENST00000497069 KNDC1Q76NI1 1749 aa22.48■■□□□ 1.19
PMF1-205ENST00000497069 GPRASP1Q5JY77 1395 aa22.47■■□□□ 1.19
PMF1-205ENST00000497069 FAM135BQ49AJ0 1406 aa22.47■■□□□ 1.19
PMF1-205ENST00000497069 NCOA3Q9Y6Q9 1424 aa22.47■■□□□ 1.19
PMF1-205ENST00000497069 DLC1Q96QB1 1528 aa22.47■■□□□ 1.19
PMF1-205ENST00000497069 WAPLQ7Z5K2 1190 aa22.46■■□□□ 1.19
PMF1-205ENST00000497069 PRAM1Q96QH2 718 aa22.46■■□□□ 1.19
PMF1-205ENST00000497069 IQSEC2Q5JU85 1478 aa22.45■■□□□ 1.18
PMF1-205ENST00000497069 MSH6P52701 1360 aa22.43■■□□□ 1.18
PMF1-205ENST00000497069 EIF3AQ14152 1382 aaKnown RBP22.43■■□□□ 1.18
PMF1-205ENST00000497069 SAFB2Q14151 953 aaKnown RBP eCLIP22.42■■□□□ 1.18
PMF1-205ENST00000497069 PLEKHH1Q9ULM0 1364 aa22.41■■□□□ 1.18
PMF1-205ENST00000497069 C19orf44Q9H6X5 657 aa22.41■■□□□ 1.18
PMF1-205ENST00000497069 ADGRL3Q9HAR2 1447 aa22.4■■□□□ 1.18
PMF1-205ENST00000497069 CENPJQ9HC77 1338 aaPredicted RBP22.38■■□□□ 1.17
PMF1-205ENST00000497069 ARHGEF28Q8N1W1 1705 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms