RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 TMEM2Q9UHN6 1383 aa19.64■□□□□ 0.73
PTPN7-218ENST00000496197 RIMS2Q9UQ26 1411 aa19.62■□□□□ 0.73
PTPN7-218ENST00000496197 ZNF326Q5BKZ1 582 aaKnown RBP19.61■□□□□ 0.73
PTPN7-218ENST00000496197 NUTM2DQ5VT03 806 aaPredicted RBP19.61■□□□□ 0.73
PTPN7-218ENST00000496197 THEMISQ8N1K5 641 aaPredicted RBP19.61■□□□□ 0.73
PTPN7-218ENST00000496197 LTKP29376 864 aa19.6■□□□□ 0.73
PTPN7-218ENST00000496197 IQGAP1P46940 1657 aa19.59■□□□□ 0.73
PTPN7-218ENST00000496197 NRXN3Q9Y4C0 1643 aa19.59■□□□□ 0.73
PTPN7-218ENST00000496197 L3MBTL2Q969R5 705 aa19.58■□□□□ 0.72
PTPN7-218ENST00000496197 SCAF11Q99590 1463 aaKnown RBP19.57■□□□□ 0.72
PTPN7-218ENST00000496197 MYOM2P54296 1465 aa19.56■□□□□ 0.72
PTPN7-218ENST00000496197 SENP3Q9H4L4 574 aaPredicted RBP19.55■□□□□ 0.72
PTPN7-218ENST00000496197 TONSLQ96HA7 1378 aa19.55■□□□□ 0.72
PTPN7-218ENST00000496197 NCKAP5LQ9HCH0 1330 aa19.55■□□□□ 0.72
PTPN7-218ENST00000496197 SETD1AO15047 1707 aaKnown RBP19.54■□□□□ 0.72
PTPN7-218ENST00000496197 DCAF11Q8TEB1 546 aa19.54■□□□□ 0.72
PTPN7-218ENST00000496197 NRXN1Q9ULB1 1477 aa19.54■□□□□ 0.72
PTPN7-218ENST00000496197 RPGRIP1LQ68CZ1 1315 aa19.54■□□□□ 0.72
PTPN7-218ENST00000496197 ADGRF5Q8IZF2 1346 aa19.54■□□□□ 0.72
PTPN7-218ENST00000496197 TXNDC2Q86VQ3 553 aa19.54■□□□□ 0.72
PTPN7-218ENST00000496197 KDM2AQ9Y2K7 1162 aa19.53■□□□□ 0.72
PTPN7-218ENST00000496197 MED14O60244 1454 aa19.52■□□□□ 0.71
PTPN7-218ENST00000496197 SETBP1Q9Y6X0 1596 aa19.51■□□□□ 0.71
PTPN7-218ENST00000496197 PIK3C2GO75747 1445 aa19.51■□□□□ 0.71
PTPN7-218ENST00000496197 ANKLE2Q86XL3 938 aa19.5■□□□□ 0.71
PTPN7-218ENST00000496197 PLEKHG1Q9ULL1 1385 aa19.49■□□□□ 0.71
PTPN7-218ENST00000496197 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.48■□□□□ 0.71
PTPN7-218ENST00000496197 EID1Q9Y6B2 187 aa19.48■□□□□ 0.71
PTPN7-218ENST00000496197 NPHP4O75161 1426 aaPredicted RBP19.48■□□□□ 0.71
PTPN7-218ENST00000496197 PRAG1Q86YV5 1406 aa19.48■□□□□ 0.71
PTPN7-218ENST00000496197 TRPM1Q7Z4N2 1603 aa19.48■□□□□ 0.71
PTPN7-218ENST00000496197 PPP1R15AO75807 674 aaPredicted RBP19.48■□□□□ 0.71
PTPN7-218ENST00000496197 ADAMTS13Q76LX8 1427 aa19.47■□□□□ 0.71
PTPN7-218ENST00000496197 ALKQ9UM73 1620 aa19.47■□□□□ 0.71
PTPN7-218ENST00000496197 VGFO15240 615 aaPredicted RBP19.47■□□□□ 0.71
PTPN7-218ENST00000496197 ASXL1Q8IXJ9 1541 aa19.46■□□□□ 0.71
PTPN7-218ENST00000496197 NBPF8Q3BBV2 869 aa19.46■□□□□ 0.71
PTPN7-218ENST00000496197 KIAA1210Q9ULL0 1709 aa19.45■□□□□ 0.7
PTPN7-218ENST00000496197 LAMC1P11047 1609 aa19.44■□□□□ 0.7
PTPN7-218ENST00000496197 HDGFP51858 240 aaKnown RBP19.44■□□□□ 0.7
PTPN7-218ENST00000496197 DIP2AQ14689 1571 aa19.43■□□□□ 0.7
PTPN7-218ENST00000496197 SLC26A8Q96RN1 970 aa19.42■□□□□ 0.7
PTPN7-218ENST00000496197 TIMELESSQ9UNS1 1208 aa19.42■□□□□ 0.7
PTPN7-218ENST00000496197 STRCP1A6NGW2 1772 aa19.42■□□□□ 0.7
PTPN7-218ENST00000496197 CFAP70Q5T0N1 1121 aa19.41■□□□□ 0.7
PTPN7-218ENST00000496197 ADGRB1O14514 1584 aa19.4■□□□□ 0.7
PTPN7-218ENST00000496197 CHD2O14647 1828 aaKnown RBP19.4■□□□□ 0.7
PTPN7-218ENST00000496197 METP08581 1390 aa19.39■□□□□ 0.69
PTPN7-218ENST00000496197 BCANQ96GW7 911 aa19.39■□□□□ 0.69
PTPN7-218ENST00000496197 STAC3Q96MF2 364 aa19.39■□□□□ 0.69
PTPN7-218ENST00000496197 C14orf93Q9H972 538 aaKnown RBP19.37■□□□□ 0.69
PTPN7-218ENST00000496197 PTPRUQ92729 1446 aa19.37■□□□□ 0.69
PTPN7-218ENST00000496197 NBPF1Q3BBV0 1214 aa19.36■□□□□ 0.69
PTPN7-218ENST00000496197 RALGAPBQ86X10 1494 aa19.36■□□□□ 0.69
PTPN7-218ENST00000496197 XRN1Q8IZH2 1706 aaKnown RBP19.36■□□□□ 0.69
PTPN7-218ENST00000496197 TMEM132EQ6IEE7 984 aa19.35■□□□□ 0.69
PTPN7-218ENST00000496197 TBX22Q9Y458 520 aa19.35■□□□□ 0.69
PTPN7-218ENST00000496197 NWD1Q149M9 1564 aa19.34■□□□□ 0.69
PTPN7-218ENST00000496197 KNDC1Q76NI1 1749 aa19.33■□□□□ 0.69
PTPN7-218ENST00000496197 ARHGEF28Q8N1W1 1705 aaKnown RBP19.32■□□□□ 0.68
PTPN7-218ENST00000496197 ROCK2O75116 1388 aaKnown RBP19.29■□□□□ 0.68
PTPN7-218ENST00000496197 ZNF335Q9H4Z2 1342 aaPredicted RBP19.29■□□□□ 0.68
PTPN7-218ENST00000496197 YTHDC2Q9H6S0 1430 aaKnown RBP19.29■□□□□ 0.68
PTPN7-218ENST00000496197 GPRASP1Q5JY77 1395 aa19.29■□□□□ 0.68
PTPN7-218ENST00000496197 XIRP1Q702N8 1843 aaKnown RBP19.28■□□□□ 0.68
PTPN7-218ENST00000496197 DMRT2Q9Y5R5 561 aa19.28■□□□□ 0.68
PTPN7-218ENST00000496197 CPS1P31327 1500 aa19.27■□□□□ 0.68
PTPN7-218ENST00000496197 PIK3R4Q99570 1358 aa19.27■□□□□ 0.68
PTPN7-218ENST00000496197 LRPPRCP42704 1394 aaKnown RBP19.25■□□□□ 0.67
PTPN7-218ENST00000496197 STK26Q9P289 416 aa19.25■□□□□ 0.67
PTPN7-218ENST00000496197 AMOTL2Q9Y2J4 779 aa19.25■□□□□ 0.67
PTPN7-218ENST00000496197 LTBP4Q8N2S1 1624 aa19.25■□□□□ 0.67
PTPN7-218ENST00000496197 TECPR2O15040 1411 aa19.24■□□□□ 0.67
PTPN7-218ENST00000496197 KCNA6P17658 529 aa19.24■□□□□ 0.67
PTPN7-218ENST00000496197 ROBO2Q9HCK4 1378 aa19.23■□□□□ 0.67
PTPN7-218ENST00000496197 TRAK1Q9UPV9 953 aa19.22■□□□□ 0.67
PTPN7-218ENST00000496197 DLC1Q96QB1 1528 aa19.22■□□□□ 0.67
PTPN7-218ENST00000496197 ABCC11Q96J66 1382 aa19.22■□□□□ 0.67
PTPN7-218ENST00000496197 CARD11Q9BXL7 1154 aa19.22■□□□□ 0.67
PTPN7-218ENST00000496197 PLEKHH1Q9ULM0 1364 aa19.21■□□□□ 0.67
PTPN7-218ENST00000496197 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.21■□□□□ 0.67
PTPN7-218ENST00000496197 PTCH1Q13635 1447 aa19.21■□□□□ 0.67
PTPN7-218ENST00000496197 NKTRP30414 1462 aaKnown RBP19.21■□□□□ 0.67
PTPN7-218ENST00000496197 ZEB1P37275 1124 aaPredicted RBP19.21■□□□□ 0.67
PTPN7-218ENST00000496197 QRICH2Q9H0J4 1663 aa19.21■□□□□ 0.67
PTPN7-218ENST00000496197 NALCNQ8IZF0 1738 aa19.21■□□□□ 0.67
PTPN7-218ENST00000496197 RBM33Q96EV2 1170 aaKnown RBP19.19■□□□□ 0.66
PTPN7-218ENST00000496197 LRRC7Q96NW7 1537 aa19.18■□□□□ 0.66
PTPN7-218ENST00000496197 WAPLQ7Z5K2 1190 aa19.17■□□□□ 0.66
PTPN7-218ENST00000496197 ILDR1Q86SU0 546 aaPredicted RBP19.16■□□□□ 0.66
PTPN7-218ENST00000496197 USP47Q96K76 1375 aa19.16■□□□□ 0.66
PTPN7-218ENST00000496197 FAM135BQ49AJ0 1406 aa19.15■□□□□ 0.66
PTPN7-218ENST00000496197 PRAM1Q96QH2 718 aa19.15■□□□□ 0.66
PTPN7-218ENST00000496197 SAFB2Q14151 953 aaKnown RBP eCLIP19.13■□□□□ 0.65
PTPN7-218ENST00000496197 TMEM94Q12767 1356 aa19.12■□□□□ 0.65
PTPN7-218ENST00000496197 PROSER2Q86WR7 435 aaPredicted RBP19.11■□□□□ 0.65
PTPN7-218ENST00000496197 ADGRB2O60241 1585 aa19.1■□□□□ 0.65
PTPN7-218ENST00000496197 SIRT1Q96EB6 747 aa19.1■□□□□ 0.65
PTPN7-218ENST00000496197 ST20-MTHFSA0A0A6YYL1 179 aa19.09■□□□□ 0.65
PTPN7-218ENST00000496197 HIRIP3Q9BW71 556 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms