RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 ADGRF5Q8IZF2 1346 aa12.57□□□□□ -0.4
GAPVD1-219ENST00000495955 NEUROD2Q15784 382 aa12.57□□□□□ -0.4
GAPVD1-219ENST00000495955 NOS1P29475 1434 aa12.56□□□□□ -0.4
GAPVD1-219ENST00000495955 PIP4K2BP78356 416 aa12.56□□□□□ -0.4
GAPVD1-219ENST00000495955 MLH3Q9UHC1 1453 aa12.56□□□□□ -0.4
GAPVD1-219ENST00000495955 HECW2Q9P2P5 1572 aa12.55□□□□□ -0.4
GAPVD1-219ENST00000495955 RBM33Q96EV2 1170 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-219ENST00000495955 AMPHP49418 695 aa12.55□□□□□ -0.4
GAPVD1-219ENST00000495955 AMOTL2Q9Y2J4 779 aa12.55□□□□□ -0.4
GAPVD1-219ENST00000495955 ABCA9Q8IUA7 1624 aa12.55□□□□□ -0.4
GAPVD1-219ENST00000495955 ARHGEF12Q9NZN5 1544 aa12.55□□□□□ -0.4
GAPVD1-219ENST00000495955 COG3Q96JB2 828 aa12.54□□□□□ -0.4
GAPVD1-219ENST00000495955 UHRF1BP1Q6BDS2 1440 aa12.54□□□□□ -0.4
GAPVD1-219ENST00000495955 NCKAP5LQ9HCH0 1330 aa12.54□□□□□ -0.4
GAPVD1-219ENST00000495955 MEX3CQ5U5Q3 659 aaKnown RBP12.54□□□□□ -0.4
GAPVD1-219ENST00000495955 PMFBP1Q8TBY8 1022 aa12.54□□□□□ -0.4
GAPVD1-219ENST00000495955 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
GAPVD1-219ENST00000495955 LTV1Q96GA3 475 aaPredicted RBP12.53□□□□□ -0.4
GAPVD1-219ENST00000495955 WAPLQ7Z5K2 1190 aa12.53□□□□□ -0.4
GAPVD1-219ENST00000495955 CDC42BPAQ5VT25 1732 aa12.53□□□□□ -0.4
GAPVD1-219ENST00000495955 CDK19Q9BWU1 502 aa12.53□□□□□ -0.4
GAPVD1-219ENST00000495955 ARAP3Q8WWN8 1544 aa12.52□□□□□ -0.4
GAPVD1-219ENST00000495955 CGNL1Q0VF96 1302 aa12.52□□□□□ -0.41
GAPVD1-219ENST00000495955 RIMS2Q9UQ26 1411 aa12.52□□□□□ -0.41
GAPVD1-219ENST00000495955 NUTM2GQ5VZR2 741 aa12.52□□□□□ -0.41
GAPVD1-219ENST00000495955 BCL11AQ9H165 835 aa12.52□□□□□ -0.41
GAPVD1-219ENST00000495955 PNNQ9H307 717 aaKnown RBP12.51□□□□□ -0.41
GAPVD1-219ENST00000495955 LAS1LQ9Y4W2 734 aaKnown RBP12.51□□□□□ -0.41
GAPVD1-219ENST00000495955 ADGBQ8N7X0 1667 aa12.51□□□□□ -0.41
GAPVD1-219ENST00000495955 GPRASP1Q5JY77 1395 aa12.5□□□□□ -0.41
GAPVD1-219ENST00000495955 MAST1Q9Y2H9 1570 aa12.5□□□□□ -0.41
GAPVD1-219ENST00000495955 EVA1CP58658 441 aa12.5□□□□□ -0.41
GAPVD1-219ENST00000495955 RALBP1Q15311 655 aa12.5□□□□□ -0.41
GAPVD1-219ENST00000495955 U2AF1L5P0DN76 240 aaPredicted RBP12.48□□□□□ -0.41
GAPVD1-219ENST00000495955 U2AF1Q01081 240 aaKnown RBP eCLIP12.48□□□□□ -0.412e-9■□□□□ 11.3
GAPVD1-219ENST00000495955 RPRD2Q5VT52 1461 aaKnown RBP12.48□□□□□ -0.41
GAPVD1-219ENST00000495955 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
GAPVD1-219ENST00000495955 DIP2BQ9P265 1576 aa12.48□□□□□ -0.41
GAPVD1-219ENST00000495955 ARXQ96QS3 562 aa12.47□□□□□ -0.41
GAPVD1-219ENST00000495955 C14orf93Q9H972 538 aaKnown RBP12.47□□□□□ -0.41
GAPVD1-219ENST00000495955 CABP1Q9NZU7 370 aa12.47□□□□□ -0.41
GAPVD1-219ENST00000495955 ABTB2Q8N961 1025 aa12.47□□□□□ -0.41
GAPVD1-219ENST00000495955 PZPP20742 1482 aa12.46□□□□□ -0.41
GAPVD1-219ENST00000495955 NLRP6P59044 892 aa12.46□□□□□ -0.41
GAPVD1-219ENST00000495955 KIF7Q2M1P5 1343 aa12.46□□□□□ -0.41
GAPVD1-219ENST00000495955 XPCQ01831 940 aaPredicted RBP12.46□□□□□ -0.42
GAPVD1-219ENST00000495955 CDC42BPBQ9Y5S2 1711 aa12.45□□□□□ -0.42
GAPVD1-219ENST00000495955 RTF1Q92541 710 aaKnown RBP12.44□□□□□ -0.42
GAPVD1-219ENST00000495955 GGNBP2Q9H3C7 697 aa12.44□□□□□ -0.42
GAPVD1-219ENST00000495955 KDM5DQ9BY66 1539 aa12.44□□□□□ -0.42
GAPVD1-219ENST00000495955 GLI2P10070 1586 aa12.44□□□□□ -0.42
GAPVD1-219ENST00000495955 SLC12A5Q9H2X9 1139 aa12.44□□□□□ -0.42
GAPVD1-219ENST00000495955 NPATQ14207 1427 aa12.44□□□□□ -0.42
GAPVD1-219ENST00000495955 LRRIQ1Q96JM4 1722 aa12.44□□□□□ -0.42
GAPVD1-219ENST00000495955 NUDT16Q96DE0 195 aaKnown RBP12.43□□□□□ -0.42
GAPVD1-219ENST00000495955 NUTM2BA6NNL0 878 aaPredicted RBP12.43□□□□□ -0.42
GAPVD1-219ENST00000495955 NUTM2EB1AL46 878 aaPredicted RBP12.43□□□□□ -0.42
GAPVD1-219ENST00000495955 NUTM2AQ8IVF1 878 aaPredicted RBP12.43□□□□□ -0.42
GAPVD1-219ENST00000495955 CCDC7Q96M83 1385 aa12.43□□□□□ -0.42
GAPVD1-219ENST00000495955 CFAP65Q6ZU64 1925 aaKnown RBP12.41□□□□□ -0.42
GAPVD1-219ENST00000495955 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
GAPVD1-219ENST00000495955 GCC2Q8IWJ2 1684 aa12.4□□□□□ -0.42
GAPVD1-219ENST00000495955 CCDC61Q9Y6R9 512 aa12.4□□□□□ -0.42
GAPVD1-219ENST00000495955 MSH6P52701 1360 aa12.4□□□□□ -0.43
GAPVD1-219ENST00000495955 ATAD2Q6PL18 1390 aa12.39□□□□□ -0.43
GAPVD1-219ENST00000495955 NLRP13Q86W25 1043 aa12.39□□□□□ -0.43
GAPVD1-219ENST00000495955 WASLO00401 505 aaPredicted RBP12.39□□□□□ -0.43
GAPVD1-219ENST00000495955 UBAP1LF5GYI3 381 aa12.38□□□□□ -0.43
GAPVD1-219ENST00000495955 CADPS2Q86UW7 1296 aa12.38□□□□□ -0.43
GAPVD1-219ENST00000495955 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.38□□□□□ -0.43
GAPVD1-219ENST00000495955 WASHC2AQ641Q2 1341 aa12.38□□□□□ -0.43
GAPVD1-219ENST00000495955 TMEM2Q9UHN6 1383 aa12.38□□□□□ -0.43
GAPVD1-219ENST00000495955 FOXO3O43524 673 aa12.37□□□□□ -0.43
GAPVD1-219ENST00000495955 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
GAPVD1-219ENST00000495955 SCAF11Q99590 1463 aaKnown RBP12.37□□□□□ -0.43
GAPVD1-219ENST00000495955 PLXNC1O60486 1568 aa12.37□□□□□ -0.43
GAPVD1-219ENST00000495955 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
GAPVD1-219ENST00000495955 CCER2I3L3R5 266 aa12.37□□□□□ -0.43
GAPVD1-219ENST00000495955 KCNA6P17658 529 aa12.36□□□□□ -0.43
GAPVD1-219ENST00000495955 TBX22Q9Y458 520 aa12.36□□□□□ -0.43
GAPVD1-219ENST00000495955 TOM1O60784 492 aa12.36□□□□□ -0.43
GAPVD1-219ENST00000495955 CCDC146Q8IYE0 955 aa12.36□□□□□ -0.43
GAPVD1-219ENST00000495955 LTKP29376 864 aa12.36□□□□□ -0.43
GAPVD1-219ENST00000495955 NLRP2Q9NX02 1062 aa12.35□□□□□ -0.43
GAPVD1-219ENST00000495955 ABCC3O15438 1527 aa12.35□□□□□ -0.43
GAPVD1-219ENST00000495955 STRN4Q9NRL3 753 aa12.34□□□□□ -0.43
GAPVD1-219ENST00000495955 USP35Q9P2H5 1018 aa12.34□□□□□ -0.43
GAPVD1-219ENST00000495955 DIAPH1O60610 1272 aaKnown RBP12.34□□□□□ -0.43
GAPVD1-219ENST00000495955 PHF23Q9BUL5 403 aaPredicted RBP12.34□□□□□ -0.43
GAPVD1-219ENST00000495955 PRAG1Q86YV5 1406 aa12.34□□□□□ -0.43
GAPVD1-219ENST00000495955 ERVK-7P63135 1459 aa12.34□□□□□ -0.43
GAPVD1-219ENST00000495955 UGGT1Q9NYU2 1555 aa12.34□□□□□ -0.43
GAPVD1-219ENST00000495955 LMTK3Q96Q04 1460 aa12.33□□□□□ -0.44
GAPVD1-219ENST00000495955 PRKRIP1Q9H875 184 aaPredicted RBP12.33□□□□□ -0.44
GAPVD1-219ENST00000495955 NPHP1O15259 732 aa12.32□□□□□ -0.44
GAPVD1-219ENST00000495955 C1orf141Q5JVX7 400 aa12.32□□□□□ -0.44
GAPVD1-219ENST00000495955 DIP2CQ9Y2E4 1556 aa12.32□□□□□ -0.44
GAPVD1-219ENST00000495955 C19orf44Q9H6X5 657 aa12.32□□□□□ -0.44
GAPVD1-219ENST00000495955 EFCAB6Q5THR3 1501 aa12.32□□□□□ -0.44
GAPVD1-219ENST00000495955 PRDM11Q9NQV5 511 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms