RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 RIMS2Q9UQ26 1411 aa13.7□□□□□ -0.22
ACTN4-207ENST00000495553 STRCQ7RTU9 1775 aa13.7□□□□□ -0.22
ACTN4-207ENST00000495553 NUTM2DQ5VT03 806 aaPredicted RBP13.69□□□□□ -0.22
ACTN4-207ENST00000495553 SPHKAPQ2M3C7 1700 aa13.69□□□□□ -0.22
ACTN4-207ENST00000495553 MED14O60244 1454 aa13.68□□□□□ -0.22
ACTN4-207ENST00000495553 SENP3Q9H4L4 574 aaPredicted RBP13.68□□□□□ -0.22
ACTN4-207ENST00000495553 TIMELESSQ9UNS1 1208 aa13.68□□□□□ -0.22
ACTN4-207ENST00000495553 KDM5AP29375 1690 aaKnown RBP13.67□□□□□ -0.22
ACTN4-207ENST00000495553 RGL3Q3MIN7 710 aa13.67□□□□□ -0.22
ACTN4-207ENST00000495553 TMEM131LA2VDJ0 1609 aa13.67□□□□□ -0.22
ACTN4-207ENST00000495553 TONSLQ96HA7 1378 aa13.67□□□□□ -0.22
ACTN4-207ENST00000495553 ZFYVE9O95405 1425 aa13.66□□□□□ -0.22
ACTN4-207ENST00000495553 RPGRIP1LQ68CZ1 1315 aa13.65□□□□□ -0.22
ACTN4-207ENST00000495553 ZNF335Q9H4Z2 1342 aaPredicted RBP13.65□□□□□ -0.22
ACTN4-207ENST00000495553 CLTCL1P53675 1640 aa13.65□□□□□ -0.22
ACTN4-207ENST00000495553 SLC26A8Q96RN1 970 aa13.65□□□□□ -0.22
ACTN4-207ENST00000495553 SIN3AQ96ST3 1273 aa13.65□□□□□ -0.22
ACTN4-207ENST00000495553 NEURL4Q96JN8 1562 aa13.65□□□□□ -0.22
ACTN4-207ENST00000495553 PLEKHG1Q9ULL1 1385 aa13.64□□□□□ -0.23
ACTN4-207ENST00000495553 VGFO15240 615 aaPredicted RBP13.64□□□□□ -0.23
ACTN4-207ENST00000495553 CERKQ8TCT0 537 aa13.62□□□□□ -0.23
ACTN4-207ENST00000495553 POLR1AO95602 1720 aaPredicted RBP13.61□□□□□ -0.23
ACTN4-207ENST00000495553 IQGAP1P46940 1657 aa13.6□□□□□ -0.23
ACTN4-207ENST00000495553 SPATA31E1Q6ZUB1 1445 aa13.6□□□□□ -0.23
ACTN4-207ENST00000495553 TBX22Q9Y458 520 aa13.6□□□□□ -0.23
ACTN4-207ENST00000495553 STAC3Q96MF2 364 aa13.59□□□□□ -0.23
ACTN4-207ENST00000495553 KIF1BO60333 1816 aa13.59□□□□□ -0.23
ACTN4-207ENST00000495553 KCNA6P17658 529 aa13.58□□□□□ -0.24
ACTN4-207ENST00000495553 NEXMIFQ5QGS0 1516 aa13.56□□□□□ -0.24
ACTN4-207ENST00000495553 MYO5BQ9ULV0 1848 aa13.56□□□□□ -0.24
ACTN4-207ENST00000495553 ADGRF5Q8IZF2 1346 aa13.55□□□□□ -0.24
ACTN4-207ENST00000495553 ADAMTS13Q76LX8 1427 aa13.55□□□□□ -0.24
ACTN4-207ENST00000495553 LTBP4Q8N2S1 1624 aa13.54□□□□□ -0.24
ACTN4-207ENST00000495553 DCAF11Q8TEB1 546 aa13.54□□□□□ -0.24
ACTN4-207ENST00000495553 L3MBTL2Q969R5 705 aa13.54□□□□□ -0.24
ACTN4-207ENST00000495553 KDM2AQ9Y2K7 1162 aa13.54□□□□□ -0.24
ACTN4-207ENST00000495553 CPS1P31327 1500 aa13.54□□□□□ -0.24
ACTN4-207ENST00000495553 PROSER2Q86WR7 435 aaPredicted RBP13.53□□□□□ -0.24
ACTN4-207ENST00000495553 PIK3R4Q99570 1358 aa13.53□□□□□ -0.24
ACTN4-207ENST00000495553 AMOTL2Q9Y2J4 779 aa13.52□□□□□ -0.25
ACTN4-207ENST00000495553 DIP2AQ14689 1571 aa13.51□□□□□ -0.25
ACTN4-207ENST00000495553 SETBP1Q9Y6X0 1596 aa13.51□□□□□ -0.25
ACTN4-207ENST00000495553 METP08581 1390 aa13.5□□□□□ -0.25
ACTN4-207ENST00000495553 C14orf37Q86TY3 774 aa13.49□□□□□ -0.25
ACTN4-207ENST00000495553 FBXO41Q8TF61 875 aa13.49□□□□□ -0.25
ACTN4-207ENST00000495553 RBM33Q96EV2 1170 aaKnown RBP13.49□□□□□ -0.25
ACTN4-207ENST00000495553 IQSEC2Q5JU85 1478 aa13.48□□□□□ -0.25
ACTN4-207ENST00000495553 TMEM94Q12767 1356 aa13.48□□□□□ -0.25
ACTN4-207ENST00000495553 UBAP1LF5GYI3 381 aa13.48□□□□□ -0.25
ACTN4-207ENST00000495553 LRRC7Q96NW7 1537 aa13.48□□□□□ -0.25
ACTN4-207ENST00000495553 MYOM2P54296 1465 aa13.48□□□□□ -0.25
ACTN4-207ENST00000495553 PIK3C2GO75747 1445 aa13.47□□□□□ -0.25
ACTN4-207ENST00000495553 TOM1O60784 492 aa13.47□□□□□ -0.25
ACTN4-207ENST00000495553 CFAP70Q5T0N1 1121 aa13.47□□□□□ -0.25
ACTN4-207ENST00000495553 C14orf93Q9H972 538 aaKnown RBP13.47□□□□□ -0.25
ACTN4-207ENST00000495553 NKTRP30414 1462 aaKnown RBP13.47□□□□□ -0.25
ACTN4-207ENST00000495553 PTPRUQ92729 1446 aa13.47□□□□□ -0.25
ACTN4-207ENST00000495553 TMEM132EQ6IEE7 984 aa13.46□□□□□ -0.25
ACTN4-207ENST00000495553 STK26Q9P289 416 aa13.46□□□□□ -0.25
ACTN4-207ENST00000495553 ALKQ9UM73 1620 aa13.46□□□□□ -0.26
ACTN4-207ENST00000495553 PPLO60437 1756 aa13.45□□□□□ -0.26
ACTN4-207ENST00000495553 NRXN3Q9Y4C0 1643 aa13.45□□□□□ -0.26
ACTN4-207ENST00000495553 NRXN1Q9ULB1 1477 aa13.44□□□□□ -0.26
ACTN4-207ENST00000495553 ILDR1Q86SU0 546 aaPredicted RBP13.44□□□□□ -0.26
ACTN4-207ENST00000495553 NWD1Q149M9 1564 aa13.44□□□□□ -0.26
ACTN4-207ENST00000495553 SCAF1Q9H7N4 1312 aaKnown RBP13.43□□□□□ -0.26
ACTN4-207ENST00000495553 MSH6P52701 1360 aa13.43□□□□□ -0.26
ACTN4-207ENST00000495553 PRAG1Q86YV5 1406 aa13.42□□□□□ -0.26
ACTN4-207ENST00000495553 NCOA3Q9Y6Q9 1424 aa13.42□□□□□ -0.26
ACTN4-207ENST00000495553 PIP4K2BP78356 416 aa13.42□□□□□ -0.26
ACTN4-207ENST00000495553 LRPPRCP42704 1394 aaKnown RBP13.42□□□□□ -0.26
ACTN4-207ENST00000495553 IFT172Q9UG01 1749 aa13.42□□□□□ -0.26
ACTN4-207ENST00000495553 STRCP1A6NGW2 1772 aa13.41□□□□□ -0.26
ACTN4-207ENST00000495553 ATF3P18847 181 aa13.41□□□□□ -0.26
ACTN4-207ENST00000495553 C19orf44Q9H6X5 657 aa13.41□□□□□ -0.26
ACTN4-207ENST00000495553 ROCK2O75116 1388 aaKnown RBP13.4□□□□□ -0.26
ACTN4-207ENST00000495553 ABCC11Q96J66 1382 aa13.4□□□□□ -0.26
ACTN4-207ENST00000495553 ROBO2Q9HCK4 1378 aa13.4□□□□□ -0.26
ACTN4-207ENST00000495553 PTCH1Q13635 1447 aa13.39□□□□□ -0.27
ACTN4-207ENST00000495553 YTHDC2Q9H6S0 1430 aaKnown RBP13.39□□□□□ -0.27
ACTN4-207ENST00000495553 CADPS2Q86UW7 1296 aa13.39□□□□□ -0.27
ACTN4-207ENST00000495553 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
ACTN4-207ENST00000495553 RALGAPBQ86X10 1494 aa13.38□□□□□ -0.27
ACTN4-207ENST00000495553 NBPF8Q3BBV2 869 aa13.38□□□□□ -0.27
ACTN4-207ENST00000495553 TRAK1Q9UPV9 953 aa13.38□□□□□ -0.27
ACTN4-207ENST00000495553 WAPLQ7Z5K2 1190 aa13.37□□□□□ -0.27
ACTN4-207ENST00000495553 SIRT1Q96EB6 747 aa13.37□□□□□ -0.27
ACTN4-207ENST00000495553 CARD11Q9BXL7 1154 aa13.37□□□□□ -0.27
ACTN4-207ENST00000495553 POGKQ9P215 609 aa13.37□□□□□ -0.27
ACTN4-207ENST00000495553 LAMC1P11047 1609 aa13.37□□□□□ -0.27
ACTN4-207ENST00000495553 KIAA1210Q9ULL0 1709 aa13.36□□□□□ -0.27
ACTN4-207ENST00000495553 SLAIN2Q9P270 581 aa13.36□□□□□ -0.27
ACTN4-207ENST00000495553 TECPR2O15040 1411 aa13.36□□□□□ -0.27
ACTN4-207ENST00000495553 XRN1Q8IZH2 1706 aaKnown RBP13.36□□□□□ -0.27
ACTN4-207ENST00000495553 NBPF1Q3BBV0 1214 aa13.35□□□□□ -0.27
ACTN4-207ENST00000495553 PRAM1Q96QH2 718 aa13.35□□□□□ -0.27
ACTN4-207ENST00000495553 ASXL1Q8IXJ9 1541 aa13.34□□□□□ -0.27
ACTN4-207ENST00000495553 EIF3AQ14152 1382 aaKnown RBP13.34□□□□□ -0.27
ACTN4-207ENST00000495553 SETD1AO15047 1707 aaKnown RBP13.34□□□□□ -0.27
ACTN4-207ENST00000495553 ADGRL3Q9HAR2 1447 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms