RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 SLIT1O75093 1534 aa16.32■□□□□ 0.2
APTX-230ENST00000494649 ARHGAP23Q9P227 1491 aa16.31■□□□□ 0.2
APTX-230ENST00000494649 ANKRD30BQ9BXX2 1392 aa16.31■□□□□ 0.2
APTX-230ENST00000494649 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
APTX-230ENST00000494649 NPHP4O75161 1426 aaPredicted RBP16.3■□□□□ 0.2
APTX-230ENST00000494649 KIF1BO60333 1816 aa16.3■□□□□ 0.2
APTX-230ENST00000494649 KDM5AP29375 1690 aaKnown RBP16.3■□□□□ 0.2
APTX-230ENST00000494649 ZFYVE9O95405 1425 aa16.29■□□□□ 0.2
APTX-230ENST00000494649 DHX57Q6P158 1386 aaKnown RBP16.29■□□□□ 0.2
APTX-230ENST00000494649 SLC26A8Q96RN1 970 aa16.29■□□□□ 0.2
APTX-230ENST00000494649 ZNF335Q9H4Z2 1342 aaPredicted RBP16.28■□□□□ 0.2
APTX-230ENST00000494649 IQGAP1P46940 1657 aa16.27■□□□□ 0.19
APTX-230ENST00000494649 SIN3AQ96ST3 1273 aa16.26■□□□□ 0.19
APTX-230ENST00000494649 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
APTX-230ENST00000494649 MED14O60244 1454 aa16.24■□□□□ 0.19
APTX-230ENST00000494649 NEXMIFQ5QGS0 1516 aa16.24■□□□□ 0.19
APTX-230ENST00000494649 SPATA31E1Q6ZUB1 1445 aa16.23■□□□□ 0.19
APTX-230ENST00000494649 HDGFP51858 240 aaKnown RBP16.23■□□□□ 0.19
APTX-230ENST00000494649 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.23■□□□□ 0.19
APTX-230ENST00000494649 FBXO41Q8TF61 875 aa16.22■□□□□ 0.19
APTX-230ENST00000494649 KDM2AQ9Y2K7 1162 aa16.21■□□□□ 0.19
APTX-230ENST00000494649 PLEKHG1Q9ULL1 1385 aa16.2■□□□□ 0.18
APTX-230ENST00000494649 ADGRF5Q8IZF2 1346 aa16.2■□□□□ 0.18
APTX-230ENST00000494649 VGFO15240 615 aaPredicted RBP16.18■□□□□ 0.18
APTX-230ENST00000494649 DCAF11Q8TEB1 546 aa16.18■□□□□ 0.18
APTX-230ENST00000494649 RBM33Q96EV2 1170 aaKnown RBP16.18■□□□□ 0.18
APTX-230ENST00000494649 PPLO60437 1756 aa16.18■□□□□ 0.18
APTX-230ENST00000494649 ADAMTS13Q76LX8 1427 aa16.17■□□□□ 0.18
APTX-230ENST00000494649 RPGRIP1LQ68CZ1 1315 aa16.17■□□□□ 0.18
APTX-230ENST00000494649 NRXN3Q9Y4C0 1643 aa16.15■□□□□ 0.18
APTX-230ENST00000494649 STRCP1A6NGW2 1772 aa16.14■□□□□ 0.17
APTX-230ENST00000494649 LTBP4Q8N2S1 1624 aa16.14■□□□□ 0.17
APTX-230ENST00000494649 IFT172Q9UG01 1749 aa16.13■□□□□ 0.17
APTX-230ENST00000494649 METP08581 1390 aa16.13■□□□□ 0.17
APTX-230ENST00000494649 CCER1Q8TC90 406 aaPredicted RBP16.12■□□□□ 0.17
APTX-230ENST00000494649 CERKQ8TCT0 537 aa16.12■□□□□ 0.17
APTX-230ENST00000494649 TBX22Q9Y458 520 aa16.12■□□□□ 0.17
APTX-230ENST00000494649 SETBP1Q9Y6X0 1596 aa16.11■□□□□ 0.17
APTX-230ENST00000494649 KCNA6P17658 529 aa16.1■□□□□ 0.17
APTX-230ENST00000494649 TMEM132EQ6IEE7 984 aa16.1■□□□□ 0.17
APTX-230ENST00000494649 L3MBTL2Q969R5 705 aa16.1■□□□□ 0.17
APTX-230ENST00000494649 CFAP70Q5T0N1 1121 aa16.1■□□□□ 0.17
APTX-230ENST00000494649 PTPRUQ92729 1446 aa16.09■□□□□ 0.17
APTX-230ENST00000494649 ALKQ9UM73 1620 aa16.09■□□□□ 0.17
APTX-230ENST00000494649 PIK3C2GO75747 1445 aa16.09■□□□□ 0.17
APTX-230ENST00000494649 AMOTL2Q9Y2J4 779 aa16.09■□□□□ 0.17
APTX-230ENST00000494649 STK26Q9P289 416 aa16.08■□□□□ 0.16
APTX-230ENST00000494649 PROSER2Q86WR7 435 aaPredicted RBP16.07■□□□□ 0.16
APTX-230ENST00000494649 MYOM2P54296 1465 aa16.07■□□□□ 0.16
APTX-230ENST00000494649 DIP2AQ14689 1571 aa16.06■□□□□ 0.16
APTX-230ENST00000494649 LRRC7Q96NW7 1537 aa16.05■□□□□ 0.16
APTX-230ENST00000494649 CHD2O14647 1828 aaKnown RBP16.05■□□□□ 0.16
APTX-230ENST00000494649 SETD1AO15047 1707 aaKnown RBP16.05■□□□□ 0.16
APTX-230ENST00000494649 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
APTX-230ENST00000494649 CPS1P31327 1500 aa16.04■□□□□ 0.16
APTX-230ENST00000494649 TMEM94Q12767 1356 aa16.04■□□□□ 0.16
APTX-230ENST00000494649 NRXN1Q9ULB1 1477 aa16.04■□□□□ 0.16
APTX-230ENST00000494649 C14orf37Q86TY3 774 aa16.03■□□□□ 0.16
APTX-230ENST00000494649 C14orf93Q9H972 538 aaKnown RBP16.03■□□□□ 0.16
APTX-230ENST00000494649 ASXL1Q8IXJ9 1541 aa16.02■□□□□ 0.16
APTX-230ENST00000494649 NWD1Q149M9 1564 aa16.02■□□□□ 0.16
APTX-230ENST00000494649 PIK3R4Q99570 1358 aa16.01■□□□□ 0.15
APTX-230ENST00000494649 NBPF1Q3BBV0 1214 aa15.99■□□□□ 0.15
APTX-230ENST00000494649 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
APTX-230ENST00000494649 ROBO2Q9HCK4 1378 aa15.99■□□□□ 0.15
APTX-230ENST00000494649 PRAG1Q86YV5 1406 aa15.99■□□□□ 0.15
APTX-230ENST00000494649 NKTRP30414 1462 aaKnown RBP15.99■□□□□ 0.15
APTX-230ENST00000494649 UBAP1LF5GYI3 381 aa15.99■□□□□ 0.15
APTX-230ENST00000494649 SAFB2Q14151 953 aaKnown RBP eCLIP15.99■□□□□ 0.15
APTX-230ENST00000494649 XRN1Q8IZH2 1706 aaKnown RBP15.99■□□□□ 0.15
APTX-230ENST00000494649 XIRP1Q702N8 1843 aaKnown RBP15.99■□□□□ 0.15
APTX-230ENST00000494649 PIP4K2BP78356 416 aa15.98■□□□□ 0.15
APTX-230ENST00000494649 WAPLQ7Z5K2 1190 aa15.98■□□□□ 0.15
APTX-230ENST00000494649 TRAK1Q9UPV9 953 aa15.98■□□□□ 0.15
APTX-230ENST00000494649 NBPF8Q3BBV2 869 aa15.98■□□□□ 0.15
APTX-230ENST00000494649 YTHDC2Q9H6S0 1430 aaKnown RBP15.97■□□□□ 0.15
APTX-230ENST00000494649 PLEKHH1Q9ULM0 1364 aa15.96■□□□□ 0.15
APTX-230ENST00000494649 STAC3Q96MF2 364 aa15.96■□□□□ 0.15
APTX-230ENST00000494649 LAMC1P11047 1609 aa15.95■□□□□ 0.14
APTX-230ENST00000494649 LRPPRCP42704 1394 aaKnown RBP15.95■□□□□ 0.14
APTX-230ENST00000494649 ADGRB1O14514 1584 aa15.95■□□□□ 0.14
APTX-230ENST00000494649 MSH6P52701 1360 aa15.93■□□□□ 0.14
APTX-230ENST00000494649 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
APTX-230ENST00000494649 PRAM1Q96QH2 718 aa15.93■□□□□ 0.14
APTX-230ENST00000494649 PTCH1Q13635 1447 aa15.92■□□□□ 0.14
APTX-230ENST00000494649 ABCC11Q96J66 1382 aa15.91■□□□□ 0.14
APTX-230ENST00000494649 NUTM2FA1L443 756 aa15.91■□□□□ 0.14
APTX-230ENST00000494649 TOM1O60784 492 aa15.91■□□□□ 0.14
APTX-230ENST00000494649 POGKQ9P215 609 aa15.91■□□□□ 0.14
APTX-230ENST00000494649 ROCK2O75116 1388 aaKnown RBP15.91■□□□□ 0.14
APTX-230ENST00000494649 IQSEC2Q5JU85 1478 aa15.9■□□□□ 0.14
APTX-230ENST00000494649 HIRIP3Q9BW71 556 aaPredicted RBP15.9■□□□□ 0.14
APTX-230ENST00000494649 C19orf44Q9H6X5 657 aa15.9■□□□□ 0.14
APTX-230ENST00000494649 NALCNQ8IZF0 1738 aa15.89■□□□□ 0.13
APTX-230ENST00000494649 TRPM1Q7Z4N2 1603 aa15.89■□□□□ 0.13
APTX-230ENST00000494649 ATF3P18847 181 aa15.89■□□□□ 0.13
APTX-230ENST00000494649 TECPR2O15040 1411 aa15.88■□□□□ 0.13
APTX-230ENST00000494649 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.88■□□□□ 0.13
APTX-230ENST00000494649 ADGRL3Q9HAR2 1447 aa15.87■□□□□ 0.13
APTX-230ENST00000494649 MINK1Q8N4C8 1332 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms