RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 ABCC5O15440 1437 aa9.62□□□□□ -0.87
EPHA3-203ENST00000494014 USP35Q9P2H5 1018 aa9.62□□□□□ -0.87
EPHA3-203ENST00000494014 PIK3C2BO00750 1634 aa9.61□□□□□ -0.87
EPHA3-203ENST00000494014 NPHP4O75161 1426 aaPredicted RBP9.61□□□□□ -0.87
EPHA3-203ENST00000494014 DAPK1P53355 1430 aa9.61□□□□□ -0.87
EPHA3-203ENST00000494014 TET3O43151 1660 aa9.61□□□□□ -0.87
EPHA3-203ENST00000494014 ZBTB47Q9UFB7 747 aaPredicted RBP9.6□□□□□ -0.87
EPHA3-203ENST00000494014 XIRP1Q702N8 1843 aaKnown RBP9.6□□□□□ -0.87
EPHA3-203ENST00000494014 HNRNPUQ00839 825 aaKnown RBP eCLIP9.6□□□□□ -0.87
EPHA3-203ENST00000494014 ZNF777Q9ULD5 760 aaPredicted RBP9.6□□□□□ -0.87
EPHA3-203ENST00000494014 FGD6Q6ZV73 1430 aa9.6□□□□□ -0.87
EPHA3-203ENST00000494014 NOS1P29475 1434 aa9.59□□□□□ -0.87
EPHA3-203ENST00000494014 RAB3GAP2Q9H2M9 1393 aa9.59□□□□□ -0.87
EPHA3-203ENST00000494014 ADGRB3O60242 1522 aa9.59□□□□□ -0.87
EPHA3-203ENST00000494014 IRX6P78412 446 aaPredicted RBP9.59□□□□□ -0.87
EPHA3-203ENST00000494014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.59□□□□□ -0.87
EPHA3-203ENST00000494014 TSPY4P0CV99 314 aa9.58□□□□□ -0.88
EPHA3-203ENST00000494014 TSPY10P0CW01 314 aa9.58□□□□□ -0.88
EPHA3-203ENST00000494014 SCAF11Q99590 1463 aaKnown RBP9.58□□□□□ -0.88
EPHA3-203ENST00000494014 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.58□□□□□ -0.88
EPHA3-203ENST00000494014 DIP2AQ14689 1571 aa9.58□□□□□ -0.88
EPHA3-203ENST00000494014 THEMISQ8N1K5 641 aaPredicted RBP9.57□□□□□ -0.88
EPHA3-203ENST00000494014 WASHC2CQ9Y4E1 1318 aa9.57□□□□□ -0.88
EPHA3-203ENST00000494014 IQGAP3Q86VI3 1631 aa9.57□□□□□ -0.88
EPHA3-203ENST00000494014 LRRC7Q96NW7 1537 aa9.56□□□□□ -0.88
EPHA3-203ENST00000494014 SETD5Q9C0A6 1442 aa9.56□□□□□ -0.88
EPHA3-203ENST00000494014 NCKAP5LQ9HCH0 1330 aa9.56□□□□□ -0.88
EPHA3-203ENST00000494014 NKTRP30414 1462 aaKnown RBP9.56□□□□□ -0.88
EPHA3-203ENST00000494014 KIF15Q9NS87 1388 aa9.56□□□□□ -0.88
EPHA3-203ENST00000494014 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
EPHA3-203ENST00000494014 ROCK1Q13464 1354 aa9.55□□□□□ -0.88
EPHA3-203ENST00000494014 KIF3BO15066 747 aa9.55□□□□□ -0.88
EPHA3-203ENST00000494014 NCOA3Q9Y6Q9 1424 aa9.55□□□□□ -0.88
EPHA3-203ENST00000494014 GGT6Q6P531 493 aa9.54□□□□□ -0.88
EPHA3-203ENST00000494014 ANKLE2Q86XL3 938 aa9.54□□□□□ -0.88
EPHA3-203ENST00000494014 MED1Q15648 1581 aaPredicted RBP9.54□□□□□ -0.88
EPHA3-203ENST00000494014 ANKRD30AQ9BXX3 1397 aa9.54□□□□□ -0.88
EPHA3-203ENST00000494014 B4GALNT3Q6L9W6 998 aa9.54□□□□□ -0.88
EPHA3-203ENST00000494014 TMEM131LA2VDJ0 1609 aa9.53□□□□□ -0.88
EPHA3-203ENST00000494014 KANK4Q5T7N3 995 aaPredicted RBP9.53□□□□□ -0.88
EPHA3-203ENST00000494014 ZNF335Q9H4Z2 1342 aaPredicted RBP9.53□□□□□ -0.88
EPHA3-203ENST00000494014 KANK1Q14678 1352 aa9.52□□□□□ -0.88
EPHA3-203ENST00000494014 CHD2O14647 1828 aaKnown RBP9.52□□□□□ -0.89
EPHA3-203ENST00000494014 PPM1GO15355 546 aaPredicted RBP9.52□□□□□ -0.89
EPHA3-203ENST00000494014 PKNOX2Q96KN3 472 aa9.52□□□□□ -0.89
EPHA3-203ENST00000494014 ZFYVE9O95405 1425 aa9.5□□□□□ -0.89
EPHA3-203ENST00000494014 TMEM2Q9UHN6 1383 aa9.5□□□□□ -0.89
EPHA3-203ENST00000494014 RSPH6AQ9H0K4 717 aa9.5□□□□□ -0.89
EPHA3-203ENST00000494014 ZBED9Q6R2W3 1325 aa9.5□□□□□ -0.89
EPHA3-203ENST00000494014 E9PCH4 1651 aa9.49□□□□□ -0.89
EPHA3-203ENST00000494014 FBXO31Q5XUX0 539 aaPredicted RBP9.49□□□□□ -0.89
EPHA3-203ENST00000494014 PRAG1Q86YV5 1406 aa9.49□□□□□ -0.89
EPHA3-203ENST00000494014 EIF5BO60841 1220 aaKnown RBP9.49□□□□□ -0.89
EPHA3-203ENST00000494014 SOCS7O14512 581 aa9.48□□□□□ -0.89
EPHA3-203ENST00000494014 NEFMP07197 916 aa9.48□□□□□ -0.89
EPHA3-203ENST00000494014 SIN3AQ96ST3 1273 aa9.48□□□□□ -0.89
EPHA3-203ENST00000494014 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
EPHA3-203ENST00000494014 GLIPR1L2Q4G1C9 344 aa9.48□□□□□ -0.89
EPHA3-203ENST00000494014 PIK3R4Q99570 1358 aa9.48□□□□□ -0.89
EPHA3-203ENST00000494014 TOM1O60784 492 aa9.47□□□□□ -0.89
EPHA3-203ENST00000494014 PLPPR3Q6T4P5 718 aa9.47□□□□□ -0.89
EPHA3-203ENST00000494014 SLC52A1Q9NWF4 448 aa9.47□□□□□ -0.89
EPHA3-203ENST00000494014 PLEKHG1Q9ULL1 1385 aa9.47□□□□□ -0.89
EPHA3-203ENST00000494014 LAMC1P11047 1609 aa9.46□□□□□ -0.89
EPHA3-203ENST00000494014 MYO5BQ9ULV0 1848 aa9.46□□□□□ -0.89
EPHA3-203ENST00000494014 SETBP1Q9Y6X0 1596 aa9.46□□□□□ -0.89
EPHA3-203ENST00000494014 SPHKAPQ2M3C7 1700 aa9.46□□□□□ -0.9
EPHA3-203ENST00000494014 XRN1Q8IZH2 1706 aaKnown RBP9.45□□□□□ -0.9
EPHA3-203ENST00000494014 ANKRD50Q9ULJ7 1429 aa9.45□□□□□ -0.9
EPHA3-203ENST00000494014 TONSLQ96HA7 1378 aa9.45□□□□□ -0.9
EPHA3-203ENST00000494014 HIRIP3Q9BW71 556 aaPredicted RBP9.45□□□□□ -0.9
EPHA3-203ENST00000494014 DISP3Q9P2K9 1392 aa9.44□□□□□ -0.9
EPHA3-203ENST00000494014 AHDC1Q5TGY3 1603 aaPredicted RBP9.44□□□□□ -0.9
EPHA3-203ENST00000494014 UBAP1LF5GYI3 381 aa9.44□□□□□ -0.9
EPHA3-203ENST00000494014 GSE1Q14687 1217 aa9.44□□□□□ -0.9
EPHA3-203ENST00000494014 SMG6Q86US8 1419 aaKnown RBP9.43□□□□□ -0.9
EPHA3-203ENST00000494014 SHPRHQ149N8 1683 aa9.43□□□□□ -0.9
EPHA3-203ENST00000494014 TRPM2O94759 1503 aa9.43□□□□□ -0.9
EPHA3-203ENST00000494014 RNF123Q5XPI4 1314 aa9.43□□□□□ -0.9
EPHA3-203ENST00000494014 DCCP43146 1447 aa9.43□□□□□ -0.9
EPHA3-203ENST00000494014 NRXN3Q9Y4C0 1643 aa9.42□□□□□ -0.9
EPHA3-203ENST00000494014 FAM43AQ8N2R8 423 aa9.42□□□□□ -0.9
EPHA3-203ENST00000494014 ROBO1Q9Y6N7 1651 aa9.42□□□□□ -0.9
EPHA3-203ENST00000494014 KCNA6P17658 529 aa9.41□□□□□ -0.9
EPHA3-203ENST00000494014 BRPF3Q9ULD4 1205 aa9.41□□□□□ -0.9
EPHA3-203ENST00000494014 CFAP65Q6ZU64 1925 aaKnown RBP9.41□□□□□ -0.9
EPHA3-203ENST00000494014 SETD1AO15047 1707 aaKnown RBP9.41□□□□□ -0.9
EPHA3-203ENST00000494014 TCERG1O14776 1098 aaKnown RBP9.4□□□□□ -0.9
EPHA3-203ENST00000494014 EID1Q9Y6B2 187 aa9.4□□□□□ -0.9
EPHA3-203ENST00000494014 DDRGK1Q96HY6 314 aa9.4□□□□□ -0.9
EPHA3-203ENST00000494014 COL16A1Q07092 1604 aaPredicted RBP9.4□□□□□ -0.9
EPHA3-203ENST00000494014 LTKP29376 864 aa9.4□□□□□ -0.91
EPHA3-203ENST00000494014 LAS1LQ9Y4W2 734 aaKnown RBP9.39□□□□□ -0.91
EPHA3-203ENST00000494014 ILDR2Q71H61 639 aa9.39□□□□□ -0.91
EPHA3-203ENST00000494014 NHSL1Q5SYE7 1610 aa9.39□□□□□ -0.91
EPHA3-203ENST00000494014 ADAMTS13Q76LX8 1427 aa9.38□□□□□ -0.91
EPHA3-203ENST00000494014 RIMS2Q9UQ26 1411 aa9.38□□□□□ -0.91
EPHA3-203ENST00000494014 MS4A1P11836 297 aa9.38□□□□□ -0.91
EPHA3-203ENST00000494014 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.38□□□□□ -0.91
EPHA3-203ENST00000494014 PHLPP1O60346 1717 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms