RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 ZFYVE9O95405 1425 aa14.72□□□□□ -0.05
MACF1-222ENST00000494012 TXNDC2Q86VQ3 553 aa14.71□□□□□ -0.05
MACF1-222ENST00000494012 RIMS2Q9UQ26 1411 aa14.71□□□□□ -0.05
MACF1-222ENST00000494012 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.69□□□□□ -0.06
MACF1-222ENST00000494012 CERKQ8TCT0 537 aa14.69□□□□□ -0.06
MACF1-222ENST00000494012 NEXMIFQ5QGS0 1516 aa14.68□□□□□ -0.06
MACF1-222ENST00000494012 PPP1R15AO75807 674 aaPredicted RBP14.68□□□□□ -0.06
MACF1-222ENST00000494012 LTKP29376 864 aa14.68□□□□□ -0.06
MACF1-222ENST00000494012 PPLO60437 1756 aa14.68□□□□□ -0.06
MACF1-222ENST00000494012 ZNF326Q5BKZ1 582 aaKnown RBP14.67□□□□□ -0.06
MACF1-222ENST00000494012 ANKRD30BQ9BXX2 1392 aa14.66□□□□□ -0.06
MACF1-222ENST00000494012 PLEKHG1Q9ULL1 1385 aa14.66□□□□□ -0.06
MACF1-222ENST00000494012 IFT172Q9UG01 1749 aa14.66□□□□□ -0.06
MACF1-222ENST00000494012 DIP2AQ14689 1571 aa14.65□□□□□ -0.06
MACF1-222ENST00000494012 SPATA31E1Q6ZUB1 1445 aa14.65□□□□□ -0.06
MACF1-222ENST00000494012 PHF23Q9BUL5 403 aaPredicted RBP14.64□□□□□ -0.07
MACF1-222ENST00000494012 RPGRIP1LQ68CZ1 1315 aa14.64□□□□□ -0.07
MACF1-222ENST00000494012 SETBP1Q9Y6X0 1596 aa14.63□□□□□ -0.07
MACF1-222ENST00000494012 LTBP4Q8N2S1 1624 aa14.63□□□□□ -0.07
MACF1-222ENST00000494012 CPS1P31327 1500 aa14.62□□□□□ -0.07
MACF1-222ENST00000494012 BCANQ96GW7 911 aa14.62□□□□□ -0.07
MACF1-222ENST00000494012 NRXN3Q9Y4C0 1643 aa14.61□□□□□ -0.07
MACF1-222ENST00000494012 ZNF335Q9H4Z2 1342 aaPredicted RBP14.61□□□□□ -0.07
MACF1-222ENST00000494012 VGFO15240 615 aaPredicted RBP14.59□□□□□ -0.07
MACF1-222ENST00000494012 NUTM2DQ5VT03 806 aaPredicted RBP14.59□□□□□ -0.07
MACF1-222ENST00000494012 STRCP1A6NGW2 1772 aa14.59□□□□□ -0.07
MACF1-222ENST00000494012 NWD1Q149M9 1564 aa14.59□□□□□ -0.07
MACF1-222ENST00000494012 DHX57Q6P158 1386 aaKnown RBP14.59□□□□□ -0.07
MACF1-222ENST00000494012 IQSEC2Q5JU85 1478 aa14.58□□□□□ -0.08
MACF1-222ENST00000494012 CHD2O14647 1828 aaKnown RBP14.58□□□□□ -0.08
MACF1-222ENST00000494012 ILDR2Q71H61 639 aa14.58□□□□□ -0.08
MACF1-222ENST00000494012 SLC26A8Q96RN1 970 aa14.58□□□□□ -0.08
MACF1-222ENST00000494012 PCGF6Q9BYE7 350 aa14.58□□□□□ -0.08
MACF1-222ENST00000494012 DISP3Q9P2K9 1392 aa14.58□□□□□ -0.08
MACF1-222ENST00000494012 ADAMTS13Q76LX8 1427 aa14.58□□□□□ -0.08
MACF1-222ENST00000494012 RGL3Q3MIN7 710 aa14.57□□□□□ -0.08
MACF1-222ENST00000494012 MYOM2P54296 1465 aa14.57□□□□□ -0.08
MACF1-222ENST00000494012 LAMC1P11047 1609 aa14.56□□□□□ -0.08
MACF1-222ENST00000494012 SETD1AO15047 1707 aaKnown RBP14.56□□□□□ -0.08
MACF1-222ENST00000494012 TBX22Q9Y458 520 aa14.56□□□□□ -0.08
MACF1-222ENST00000494012 PIK3R4Q99570 1358 aa14.56□□□□□ -0.08
MACF1-222ENST00000494012 NKTRP30414 1462 aaKnown RBP14.56□□□□□ -0.08
MACF1-222ENST00000494012 ALKQ9UM73 1620 aa14.53□□□□□ -0.08
MACF1-222ENST00000494012 SENP3Q9H4L4 574 aaPredicted RBP14.53□□□□□ -0.08
MACF1-222ENST00000494012 NRXN1Q9ULB1 1477 aa14.52□□□□□ -0.08
MACF1-222ENST00000494012 PIK3C2GO75747 1445 aa14.52□□□□□ -0.08
MACF1-222ENST00000494012 KCNA6P17658 529 aa14.52□□□□□ -0.09
MACF1-222ENST00000494012 XRN1Q8IZH2 1706 aaKnown RBP14.52□□□□□ -0.09
MACF1-222ENST00000494012 STAC3Q96MF2 364 aa14.51□□□□□ -0.09
MACF1-222ENST00000494012 LRRC7Q96NW7 1537 aa14.51□□□□□ -0.09
MACF1-222ENST00000494012 XIRP1Q702N8 1843 aaKnown RBP14.5□□□□□ -0.09
MACF1-222ENST00000494012 ADGRF5Q8IZF2 1346 aa14.49□□□□□ -0.09
MACF1-222ENST00000494012 SOCS7O14512 581 aa14.48□□□□□ -0.09
MACF1-222ENST00000494012 DCAF11Q8TEB1 546 aa14.48□□□□□ -0.09
MACF1-222ENST00000494012 METP08581 1390 aa14.47□□□□□ -0.09
MACF1-222ENST00000494012 KNDC1Q76NI1 1749 aa14.46□□□□□ -0.1
MACF1-222ENST00000494012 KIAA1210Q9ULL0 1709 aa14.46□□□□□ -0.1
MACF1-222ENST00000494012 PRAG1Q86YV5 1406 aa14.45□□□□□ -0.1
MACF1-222ENST00000494012 PTPRUQ92729 1446 aa14.45□□□□□ -0.1
MACF1-222ENST00000494012 AMOTL2Q9Y2J4 779 aa14.45□□□□□ -0.1
MACF1-222ENST00000494012 TMEM94Q12767 1356 aa14.45□□□□□ -0.1
MACF1-222ENST00000494012 PTCH1Q13635 1447 aa14.44□□□□□ -0.1
MACF1-222ENST00000494012 PROSER2Q86WR7 435 aaPredicted RBP14.44□□□□□ -0.1
MACF1-222ENST00000494012 ASXL1Q8IXJ9 1541 aa14.44□□□□□ -0.1
MACF1-222ENST00000494012 NCOA3Q9Y6Q9 1424 aa14.43□□□□□ -0.1
MACF1-222ENST00000494012 NEUROD1Q13562 356 aa14.43□□□□□ -0.1
MACF1-222ENST00000494012 SIN3AQ96ST3 1273 aa14.43□□□□□ -0.1
MACF1-222ENST00000494012 KDM2AQ9Y2K7 1162 aa14.43□□□□□ -0.1
MACF1-222ENST00000494012 CLSPNQ9HAW4 1339 aa14.42□□□□□ -0.1
MACF1-222ENST00000494012 C14orf93Q9H972 538 aaKnown RBP14.42□□□□□ -0.1
MACF1-222ENST00000494012 TONSLQ96HA7 1378 aa14.41□□□□□ -0.1
MACF1-222ENST00000494012 TECPR2O15040 1411 aa14.41□□□□□ -0.1
MACF1-222ENST00000494012 ADGRB1O14514 1584 aa14.4□□□□□ -0.1
MACF1-222ENST00000494012 LRPPRCP42704 1394 aaKnown RBP14.4□□□□□ -0.1
MACF1-222ENST00000494012 MSH6P52701 1360 aa14.4□□□□□ -0.1
MACF1-222ENST00000494012 NALCNQ8IZF0 1738 aa14.4□□□□□ -0.1
MACF1-222ENST00000494012 YTHDC2Q9H6S0 1430 aaKnown RBP14.4□□□□□ -0.1
MACF1-222ENST00000494012 TOM1O60784 492 aa14.39□□□□□ -0.11
MACF1-222ENST00000494012 CFAP70Q5T0N1 1121 aa14.39□□□□□ -0.11
MACF1-222ENST00000494012 L3MBTL2Q969R5 705 aa14.39□□□□□ -0.11
MACF1-222ENST00000494012 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.38□□□□□ -0.11
MACF1-222ENST00000494012 UBAP1LF5GYI3 381 aa14.38□□□□□ -0.11
MACF1-222ENST00000494012 C14orf37Q86TY3 774 aa14.38□□□□□ -0.11
MACF1-222ENST00000494012 TRPM1Q7Z4N2 1603 aa14.37□□□□□ -0.11
MACF1-222ENST00000494012 ABCC11Q96J66 1382 aa14.37□□□□□ -0.11
MACF1-222ENST00000494012 DCCP43146 1447 aa14.37□□□□□ -0.11
MACF1-222ENST00000494012 DLC1Q96QB1 1528 aa14.36□□□□□ -0.11
MACF1-222ENST00000494012 ROBO2Q9HCK4 1378 aa14.36□□□□□ -0.11
MACF1-222ENST00000494012 ADGRL3Q9HAR2 1447 aa14.36□□□□□ -0.11
MACF1-222ENST00000494012 TMEM132EQ6IEE7 984 aa14.36□□□□□ -0.11
MACF1-222ENST00000494012 CCER1Q8TC90 406 aaPredicted RBP14.36□□□□□ -0.11
MACF1-222ENST00000494012 RBM33Q96EV2 1170 aaKnown RBP14.36□□□□□ -0.11
MACF1-222ENST00000494012 FAM135BQ49AJ0 1406 aa14.35□□□□□ -0.11
MACF1-222ENST00000494012 STK26Q9P289 416 aa14.35□□□□□ -0.11
MACF1-222ENST00000494012 ARHGEF28Q8N1W1 1705 aaKnown RBP14.35□□□□□ -0.11
MACF1-222ENST00000494012 C19orf44Q9H6X5 657 aa14.34□□□□□ -0.11
MACF1-222ENST00000494012 CDC42BPGQ6DT37 1551 aa14.34□□□□□ -0.11
MACF1-222ENST00000494012 ATF3P18847 181 aa14.32□□□□□ -0.12
MACF1-222ENST00000494012 CADPS2Q86UW7 1296 aa14.32□□□□□ -0.12
MACF1-222ENST00000494012 SIRT1Q96EB6 747 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms