RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 TMEM131LA2VDJ0 1609 aa12.71□□□□□ -0.37
SMARCC1-208ENST00000492896 ST20-MTHFSA0A0A6YYL1 179 aa12.71□□□□□ -0.37
SMARCC1-208ENST00000492896 YTHDC1Q96MU7 727 aaKnown RBP12.71□□□□□ -0.37
SMARCC1-208ENST00000492896 SETBP1Q9Y6X0 1596 aa12.71□□□□□ -0.37
SMARCC1-208ENST00000492896 NEXMIFQ5QGS0 1516 aa12.71□□□□□ -0.38
SMARCC1-208ENST00000492896 SCAF11Q99590 1463 aaKnown RBP12.71□□□□□ -0.38
SMARCC1-208ENST00000492896 SPATA31D1Q6ZQQ2 1576 aa12.7□□□□□ -0.38
SMARCC1-208ENST00000492896 CCER2I3L3R5 266 aa12.7□□□□□ -0.38
SMARCC1-208ENST00000492896 CHGAP10645 457 aaKnown RBP12.69□□□□□ -0.38
SMARCC1-208ENST00000492896 MYO3AQ8NEV4 1616 aa12.69□□□□□ -0.38
SMARCC1-208ENST00000492896 RPGRIP1LQ68CZ1 1315 aa12.68□□□□□ -0.38
SMARCC1-208ENST00000492896 EIF3AQ14152 1382 aaKnown RBP12.68□□□□□ -0.38
SMARCC1-208ENST00000492896 POLR3GLQ9BT43 218 aa12.67□□□□□ -0.38
SMARCC1-208ENST00000492896 PIK3C2GO75747 1445 aa12.67□□□□□ -0.38
SMARCC1-208ENST00000492896 ADGRF5Q8IZF2 1346 aa12.66□□□□□ -0.38
SMARCC1-208ENST00000492896 SLC52A1Q9NWF4 448 aa12.66□□□□□ -0.38
SMARCC1-208ENST00000492896 KDM5AP29375 1690 aaKnown RBP12.65□□□□□ -0.38
SMARCC1-208ENST00000492896 QRICH2Q9H0J4 1663 aa12.64□□□□□ -0.39
SMARCC1-208ENST00000492896 FER1L4A9Z1Z3 1794 aa12.64□□□□□ -0.39
SMARCC1-208ENST00000492896 MLECQ14165 292 aa12.63□□□□□ -0.39
SMARCC1-208ENST00000492896 ADGRB1O14514 1584 aa12.63□□□□□ -0.39
SMARCC1-208ENST00000492896 ZFYVE9O95405 1425 aa12.62□□□□□ -0.39
SMARCC1-208ENST00000492896 ARHGEF28Q8N1W1 1705 aaKnown RBP12.62□□□□□ -0.39
SMARCC1-208ENST00000492896 DISP3Q9P2K9 1392 aa12.62□□□□□ -0.39
SMARCC1-208ENST00000492896 TMF1P82094 1093 aa12.62□□□□□ -0.39
SMARCC1-208ENST00000492896 IDI1Q13907 227 aa12.62□□□□□ -0.39
SMARCC1-208ENST00000492896 CFAP70Q5T0N1 1121 aa12.62□□□□□ -0.39
SMARCC1-208ENST00000492896 TESK2Q96S53 571 aa12.62□□□□□ -0.39
SMARCC1-208ENST00000492896 MYOM1P52179 1685 aa12.61□□□□□ -0.39
SMARCC1-208ENST00000492896 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
SMARCC1-208ENST00000492896 ESF1Q9H501 851 aaKnown RBP12.61□□□□□ -0.39
SMARCC1-208ENST00000492896 FBXO31Q5XUX0 539 aaPredicted RBP12.6□□□□□ -0.39
SMARCC1-208ENST00000492896 VGFO15240 615 aaPredicted RBP12.59□□□□□ -0.39
SMARCC1-208ENST00000492896 PRKRIP1Q9H875 184 aaPredicted RBP12.59□□□□□ -0.39
SMARCC1-208ENST00000492896 ZMYM3Q14202 1370 aa12.58□□□□□ -0.4
SMARCC1-208ENST00000492896 C3P01024 1663 aa12.58□□□□□ -0.4
SMARCC1-208ENST00000492896 C14orf93Q9H972 538 aaKnown RBP12.58□□□□□ -0.4
SMARCC1-208ENST00000492896 A2ML1A8K2U0 1454 aa12.58□□□□□ -0.4
SMARCC1-208ENST00000492896 ASXL1Q8IXJ9 1541 aa12.57□□□□□ -0.4
SMARCC1-208ENST00000492896 UBR1Q8IWV7 1749 aa12.57□□□□□ -0.4
SMARCC1-208ENST00000492896 SETD1AO15047 1707 aaKnown RBP12.57□□□□□ -0.4
SMARCC1-208ENST00000492896 SBNO2Q9Y2G9 1366 aa12.56□□□□□ -0.4
SMARCC1-208ENST00000492896 SLC24A1O60721 1099 aa12.56□□□□□ -0.4
SMARCC1-208ENST00000492896 CDCA8Q53HL2 280 aa12.56□□□□□ -0.4
SMARCC1-208ENST00000492896 TNRQ92752 1358 aa12.56□□□□□ -0.4
SMARCC1-208ENST00000492896 DNAJC5Q9H3Z4 198 aa12.55□□□□□ -0.4
SMARCC1-208ENST00000492896 STAG3Q9UJ98 1225 aa12.55□□□□□ -0.4
SMARCC1-208ENST00000492896 KTN1Q86UP2 1357 aaKnown RBP12.55□□□□□ -0.4
SMARCC1-208ENST00000492896 ALKQ9UM73 1620 aa12.55□□□□□ -0.4
SMARCC1-208ENST00000492896 RIMS2Q9UQ26 1411 aa12.54□□□□□ -0.4
SMARCC1-208ENST00000492896 NUTM2DQ5VT03 806 aaPredicted RBP12.53□□□□□ -0.4
SMARCC1-208ENST00000492896 CENPJQ9HC77 1338 aaPredicted RBP12.53□□□□□ -0.4
SMARCC1-208ENST00000492896 NLRP1Q9C000 1473 aa12.52□□□□□ -0.41
SMARCC1-208ENST00000492896 NRXN3Q9Y4C0 1643 aa12.51□□□□□ -0.41
SMARCC1-208ENST00000492896 KNDC1Q76NI1 1749 aa12.51□□□□□ -0.41
SMARCC1-208ENST00000492896 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
SMARCC1-208ENST00000492896 TRAK1Q9UPV9 953 aa12.5□□□□□ -0.41
SMARCC1-208ENST00000492896 RIMS1Q86UR5 1692 aaKnown RBP12.5□□□□□ -0.41
SMARCC1-208ENST00000492896 RALBP1Q15311 655 aa12.49□□□□□ -0.41
SMARCC1-208ENST00000492896 TMEM132EQ6IEE7 984 aa12.49□□□□□ -0.41
SMARCC1-208ENST00000492896 DLC1Q96QB1 1528 aa12.48□□□□□ -0.41
SMARCC1-208ENST00000492896 TULP4Q9NRJ4 1543 aa12.48□□□□□ -0.41
SMARCC1-208ENST00000492896 PTPRMP28827 1452 aa12.48□□□□□ -0.41
SMARCC1-208ENST00000492896 PARD3Q8TEW0 1356 aa12.48□□□□□ -0.41
SMARCC1-208ENST00000492896 PANK3Q9H999 370 aa12.48□□□□□ -0.41
SMARCC1-208ENST00000492896 YTHDC2Q9H6S0 1430 aaKnown RBP12.47□□□□□ -0.41
SMARCC1-208ENST00000492896 MYBBP1AQ9BQG0 1328 aaKnown RBP12.47□□□□□ -0.41
SMARCC1-208ENST00000492896 SCAF1Q9H7N4 1312 aaKnown RBP12.47□□□□□ -0.41
SMARCC1-208ENST00000492896 CCDC184Q52MB2 194 aa12.47□□□□□ -0.41
SMARCC1-208ENST00000492896 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMARCC1-208ENST00000492896 PER1O15534 1290 aaPredicted RBP12.46□□□□□ -0.41
SMARCC1-208ENST00000492896 CNGB1Q14028 1251 aaPredicted RBP12.46□□□□□ -0.41
SMARCC1-208ENST00000492896 BRD4O60885 1362 aaPredicted RBP12.45□□□□□ -0.42
SMARCC1-208ENST00000492896 ADAMTSL3P82987 1691 aa12.45□□□□□ -0.42
SMARCC1-208ENST00000492896 USP32Q8NFA0 1604 aa12.45□□□□□ -0.42
SMARCC1-208ENST00000492896 TMEM2Q9UHN6 1383 aa12.44□□□□□ -0.42
SMARCC1-208ENST00000492896 HDGFP51858 240 aaKnown RBP12.43□□□□□ -0.42
SMARCC1-208ENST00000492896 LRPPRCP42704 1394 aaKnown RBP12.43□□□□□ -0.42
SMARCC1-208ENST00000492896 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
SMARCC1-208ENST00000492896 SLIT1O75093 1534 aa12.42□□□□□ -0.42
SMARCC1-208ENST00000492896 EVC2Q86UK5 1308 aa12.42□□□□□ -0.42
SMARCC1-208ENST00000492896 ZNF142P52746 1687 aaPredicted RBP12.42□□□□□ -0.42
SMARCC1-208ENST00000492896 HNRNPUQ00839 825 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMARCC1-208ENST00000492896 KNSTRNQ9Y448 316 aa12.42□□□□□ -0.42
SMARCC1-208ENST00000492896 GTF3C3Q9Y5Q9 886 aa12.42□□□□□ -0.42
SMARCC1-208ENST00000492896 CPS1P31327 1500 aa12.42□□□□□ -0.42
SMARCC1-208ENST00000492896 ARHGAP23Q9P227 1491 aa12.41□□□□□ -0.42
SMARCC1-208ENST00000492896 CC2D1BQ5T0F9 858 aaKnown RBP12.41□□□□□ -0.42
SMARCC1-208ENST00000492896 NLRP13Q86W25 1043 aa12.41□□□□□ -0.42
SMARCC1-208ENST00000492896 FAM9BQ8IZU0 186 aa12.41□□□□□ -0.42
SMARCC1-208ENST00000492896 PUS7Q96PZ0 661 aaKnown RBP12.41□□□□□ -0.42
SMARCC1-208ENST00000492896 SENP3Q9H4L4 574 aaPredicted RBP12.41□□□□□ -0.42
SMARCC1-208ENST00000492896 STK26Q9P289 416 aa12.41□□□□□ -0.42
SMARCC1-208ENST00000492896 CEP170BQ9Y4F5 1589 aaPredicted RBP12.41□□□□□ -0.42
SMARCC1-208ENST00000492896 CEBPAP49715 358 aaPredicted RBP12.4□□□□□ -0.42
SMARCC1-208ENST00000492896 TMC1Q8TDI8 760 aa12.4□□□□□ -0.42
SMARCC1-208ENST00000492896 DIP2AQ14689 1571 aa12.39□□□□□ -0.43
SMARCC1-208ENST00000492896 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
SMARCC1-208ENST00000492896 PLEKHG1Q9ULL1 1385 aa12.39□□□□□ -0.43
SMARCC1-208ENST00000492896 NINLQ9Y2I6 1382 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms