RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 TPM1P09493 284 aa6.63□□□□□ -1.35
FN1-224ENST00000492816 SF3A1Q15459 793 aaKnown RBP6.63□□□□□ -1.35
FN1-224ENST00000492816 ZNF652Q9Y2D9 606 aa6.63□□□□□ -1.35
FN1-224ENST00000492816 HSCBQ8IWL3 235 aa6.62□□□□□ -1.35
FN1-224ENST00000492816 ZPR1O75312 459 aa6.62□□□□□ -1.35
FN1-224ENST00000492816 BRMS1Q9HCU9 246 aa6.62□□□□□ -1.35
FN1-224ENST00000492816 TATP17735 454 aaPredicted RBP6.62□□□□□ -1.35
FN1-224ENST00000492816 APBB1O00213 710 aa6.62□□□□□ -1.35
FN1-224ENST00000492816 TXNDC2Q86VQ3 553 aa6.62□□□□□ -1.35
FN1-224ENST00000492816 AIDAQ96BJ3 306 aa6.62□□□□□ -1.35
FN1-224ENST00000492816 ROCK2O75116 1388 aaKnown RBP6.62□□□□□ -1.35
FN1-224ENST00000492816 ANKRD20A12PQ8NF67 263 aa6.62□□□□□ -1.35
FN1-224ENST00000492816 FMN1Q68DA7 1419 aa6.62□□□□□ -1.35
FN1-224ENST00000492816 SUPT16HQ9Y5B9 1047 aaKnown RBP6.61□□□□□ -1.35
FN1-224ENST00000492816 BIN2Q9UBW5 565 aaPredicted RBP6.61□□□□□ -1.35
FN1-224ENST00000492816 HOOK1Q9UJC3 728 aaKnown RBP6.61□□□□□ -1.35
FN1-224ENST00000492816 SART3Q15020 963 aaKnown RBP6.61□□□□□ -1.35
FN1-224ENST00000492816 NEBLO76041 1014 aa6.61□□□□□ -1.35
FN1-224ENST00000492816 LMOD1P29536 600 aaPredicted RBP6.61□□□□□ -1.35
FN1-224ENST00000492816 ROCK1Q13464 1354 aa6.61□□□□□ -1.35
FN1-224ENST00000492816 ZSCAN29Q8IWY8 852 aaPredicted RBP6.6□□□□□ -1.35
FN1-224ENST00000492816 NUP155O75694 1391 aa6.6□□□□□ -1.35
FN1-224ENST00000492816 SSFA2P28290 1259 aa6.6□□□□□ -1.35
FN1-224ENST00000492816 CA8P35219 290 aa6.6□□□□□ -1.35
FN1-224ENST00000492816 PRDM11Q9NQV5 511 aa6.6□□□□□ -1.35
FN1-224ENST00000492816 KIF16BQ96L93 1317 aa6.6□□□□□ -1.35
FN1-224ENST00000492816 XBP1P17861 261 aa6.6□□□□□ -1.35
FN1-224ENST00000492816 TBC1D2BQ9UPU7 963 aa6.6□□□□□ -1.35
FN1-224ENST00000492816 TNNT3P45378 269 aaPredicted RBP6.6□□□□□ -1.35
FN1-224ENST00000492816 ARHGEF6Q15052 776 aa6.6□□□□□ -1.35
FN1-224ENST00000492816 LRPPRCP42704 1394 aaKnown RBP6.6□□□□□ -1.35
FN1-224ENST00000492816 MIA2Q96PC5 1412 aa6.6□□□□□ -1.35
FN1-224ENST00000492816 PTMSP20962 102 aa6.6□□□□□ -1.35
FN1-224ENST00000492816 EPS15P42566 896 aa6.6□□□□□ -1.35
FN1-224ENST00000492816 NFXL1Q6ZNB6 911 aa6.6□□□□□ -1.35
FN1-224ENST00000492816 PPP4R3AQ6IN85 833 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 GOLGA6L1Q8N7Z2 621 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 SPRYD3Q8NCJ5 442 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 SYAP1Q96A49 352 aaPredicted RBP6.59□□□□□ -1.35
FN1-224ENST00000492816 KTN1Q86UP2 1357 aaKnown RBP6.59□□□□□ -1.35
FN1-224ENST00000492816 VTI1AQ96AJ9 217 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 SPG7Q9UQ90 795 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 CCDC70Q6NSX1 233 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 FYB1O15117 783 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 MYO1BO43795 1136 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 FAM184AQ8NB25 1140 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 H3BQV1 296 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 IFFO2Q5TF58 517 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 WDR78Q5VTH9 848 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 RIC3Q7Z5B4 369 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 SCLT1Q96NL6 688 aa6.59□□□□□ -1.35
FN1-224ENST00000492816 ARHGAP35Q9NRY4 1499 aa6.59□□□□□ -1.36
FN1-224ENST00000492816 PLEKHO1Q53GL0 409 aaPredicted RBP6.58□□□□□ -1.36
FN1-224ENST00000492816 AMER1Q5JTC6 1135 aaPredicted RBP6.58□□□□□ -1.36
FN1-224ENST00000492816 RUFY2Q8WXA3 655 aa6.58□□□□□ -1.36
FN1-224ENST00000492816 ATP2B2Q01814 1243 aa6.58□□□□□ -1.36
FN1-224ENST00000492816 PKD2Q13563 968 aa6.58□□□□□ -1.36
FN1-224ENST00000492816 ZFYVE27Q5T4F4 411 aa6.58□□□□□ -1.36
FN1-224ENST00000492816 IBSPP21815 317 aaPredicted RBP6.58□□□□□ -1.36
FN1-224ENST00000492816 SAFBQ15424 915 aaKnown RBP eCLIP6.58□□□□□ -1.36
FN1-224ENST00000492816 HSP90AB4PQ58FF6 505 aa6.58□□□□□ -1.36
FN1-224ENST00000492816 MFAP1P55081 439 aaKnown RBP6.58□□□□□ -1.36
FN1-224ENST00000492816 TNIP1Q15025 636 aa6.58□□□□□ -1.36
FN1-224ENST00000492816 ABTB2Q8N961 1025 aa6.58□□□□□ -1.36
FN1-224ENST00000492816 PCMTD1Q96MG8 357 aaPredicted RBP6.58□□□□□ -1.36
FN1-224ENST00000492816 G3BP1Q13283 466 aaKnown RBP eCLIP6.58□□□□□ -1.361e-323■□□□□ 8.7
FN1-224ENST00000492816 ITPRIPQ8IWB1 547 aa6.58□□□□□ -1.36
FN1-224ENST00000492816 BCL2L13Q9BXK5 485 aa6.58□□□□□ -1.36
FN1-224ENST00000492816 DHX57Q6P158 1386 aaKnown RBP6.58□□□□□ -1.36
FN1-224ENST00000492816 EIF2S2P20042 333 aaKnown RBP6.58□□□□□ -1.36
FN1-224ENST00000492816 ZBTB24O43167 697 aaPredicted RBP6.57□□□□□ -1.36
FN1-224ENST00000492816 IPO7O95373 1038 aaKnown RBP6.57□□□□□ -1.36
FN1-224ENST00000492816 TDRD9Q8NDG6 1382 aaKnown RBP6.57□□□□□ -1.36
FN1-224ENST00000492816 PLCD3Q8N3E9 789 aa6.57□□□□□ -1.36
FN1-224ENST00000492816 CABP4P57796 275 aa6.57□□□□□ -1.36
FN1-224ENST00000492816 NOL8Q76FK4 1167 aaKnown RBP6.57□□□□□ -1.36
FN1-224ENST00000492816 NLRP13Q86W25 1043 aa6.57□□□□□ -1.36
FN1-224ENST00000492816 ERC1Q8IUD2 1116 aa6.57□□□□□ -1.36
FN1-224ENST00000492816 CGNL1Q0VF96 1302 aa6.57□□□□□ -1.36
FN1-224ENST00000492816 CPLX1O14810 134 aa6.57□□□□□ -1.36
FN1-224ENST00000492816 AK7Q96M32 723 aa6.57□□□□□ -1.36
FN1-224ENST00000492816 LRSAM1Q6UWE0 723 aa6.56□□□□□ -1.36
FN1-224ENST00000492816 TRAK1Q9UPV9 953 aa6.56□□□□□ -1.36
FN1-224ENST00000492816 ADAMTS2O95450 1211 aa6.56□□□□□ -1.36
FN1-224ENST00000492816 SYCP1Q15431 976 aa6.56□□□□□ -1.36
FN1-224ENST00000492816 RPGRQ92834 1020 aaKnown RBP6.56□□□□□ -1.36
FN1-224ENST00000492816 LPXNO60711 386 aa6.56□□□□□ -1.36
FN1-224ENST00000492816 ERICH6BQ5W0A0 696 aa6.56□□□□□ -1.36
FN1-224ENST00000492816 PRDM2Q13029 1718 aa6.56□□□□□ -1.36
FN1-224ENST00000492816 FAM177BA6PVY3 158 aa6.56□□□□□ -1.36
FN1-224ENST00000492816 IFIT2P09913 472 aaKnown RBP6.55□□□□□ -1.36
FN1-224ENST00000492816 MATR3P43243 847 aaKnown RBP eCLIP6.55□□□□□ -1.369e-7■■□□□ 13.9
FN1-224ENST00000492816 SLF2Q8IX21 1173 aa6.55□□□□□ -1.36
FN1-224ENST00000492816 DDX54Q8TDD1 881 aaKnown RBP6.55□□□□□ -1.36
FN1-224ENST00000492816 CDK5RAP3Q96JB5 506 aa6.55□□□□□ -1.36
FN1-224ENST00000492816 MINK1Q8N4C8 1332 aaPredicted RBP6.55□□□□□ -1.36
FN1-224ENST00000492816 PLIN1O60240 522 aa6.55□□□□□ -1.36
FN1-224ENST00000492816 ZNF287Q9HBT7 754 aa6.55□□□□□ -1.36
FN1-224ENST00000492816 RBM27Q9P2N5 1060 aaKnown RBP6.55□□□□□ -1.36
FN1-224ENST00000492816 NLRP6P59044 892 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms