RNA–Protein interactions for RNA: ENST00000491523.5

RPL13-209, Transcript of ribosomal protein L13, human

TSL 3

Gene RPL13, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL13-209	ENST00000491523	CHGA	P10645	457 aa	Known RBP	33.52	■■■□□ 2.96
RPL13-209	ENST00000491523	CLTCL1	P53675	1640 aa		33.51	■■■□□ 2.96
RPL13-209	ENST00000491523	LTK	P29376	864 aa		33.51	■■■□□ 2.95
RPL13-209	ENST00000491523	MYO5B	Q9ULV0	1848 aa		33.45	■■■□□ 2.95
RPL13-209	ENST00000491523	HDGF	P51858	240 aa	Known RBP	33.45	■■■□□ 2.95
RPL13-209	ENST00000491523	ZFYVE9	O95405	1425 aa		33.4	■■■□□ 2.94
RPL13-209	ENST00000491523	RIMS2	Q9UQ26	1411 aa		33.4	■■■□□ 2.94
RPL13-209	ENST00000491523	CCDC144A	A2RUR9	1427 aa		33.36	■■■□□ 2.93
RPL13-209	ENST00000491523	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.36	■■■□□ 2.93
RPL13-209	ENST00000491523	KIF1B	O60333	1816 aa		33.32	■■■□□ 2.93
RPL13-209	ENST00000491523	ZNF326	Q5BKZ1	582 aa	Known RBP	33.32	■■■□□ 2.92
RPL13-209	ENST00000491523	PPP1R15A	O75807	674 aa	Predicted RBP	33.31	■■■□□ 2.92
RPL13-209	ENST00000491523	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.31	■■■□□ 2.92
RPL13-209	ENST00000491523	PLEKHG1	Q9ULL1	1385 aa		33.31	■■■□□ 2.92
RPL13-209	ENST00000491523	STRCP1	A6NGW2	1772 aa		33.26	■■■□□ 2.92
RPL13-209	ENST00000491523	ANKRD30B	Q9BXX2	1392 aa		33.26	■■■□□ 2.92
RPL13-209	ENST00000491523	SENP3	Q9H4L4	574 aa	Predicted RBP	33.26	■■■□□ 2.91
RPL13-209	ENST00000491523	LRRC7	Q96NW7	1537 aa		33.25	■■■□□ 2.91
RPL13-209	ENST00000491523	UBAP1L	F5GYI3	381 aa		33.25	■■■□□ 2.91
RPL13-209	ENST00000491523	NEXMIF	Q5QGS0	1516 aa		33.24	■■■□□ 2.91
RPL13-209	ENST00000491523	TOM1	O60784	492 aa		33.23	■■■□□ 2.91
RPL13-209	ENST00000491523	BCAN	Q96GW7	911 aa		33.22	■■■□□ 2.91
RPL13-209	ENST00000491523	SPATA31E1	Q6ZUB1	1445 aa		33.21	■■■□□ 2.91
RPL13-209	ENST00000491523	KCNA6	P17658	529 aa		33.21	■■■□□ 2.91
RPL13-209	ENST00000491523	SLC26A8	Q96RN1	970 aa		33.19	■■■□□ 2.9
RPL13-209	ENST00000491523	TBX22	Q9Y458	520 aa		33.18	■■■□□ 2.9
RPL13-209	ENST00000491523	DIP2A	Q14689	1571 aa		33.17	■■■□□ 2.9
RPL13-209	ENST00000491523	RGL3	Q3MIN7	710 aa		33.16	■■■□□ 2.9
RPL13-209	ENST00000491523	NKTR	P30414	1462 aa	Known RBP	33.16	■■■□□ 2.9
RPL13-209	ENST00000491523	NWD1	Q149M9	1564 aa		33.16	■■■□□ 2.9
RPL13-209	ENST00000491523	RPGRIP1L	Q68CZ1	1315 aa		33.15	■■■□□ 2.9
RPL13-209	ENST00000491523	PIK3R4	Q99570	1358 aa		33.14	■■■□□ 2.9
RPL13-209	ENST00000491523	ADAMTS13	Q76LX8	1427 aa		33.12	■■■□□ 2.89
RPL13-209	ENST00000491523	PPL	O60437	1756 aa		33.1	■■■□□ 2.89
RPL13-209	ENST00000491523	PCGF6	Q9BYE7	350 aa		33.09	■■■□□ 2.89
RPL13-209	ENST00000491523	SETBP1	Q9Y6X0	1596 aa		33.09	■■■□□ 2.89
RPL13-209	ENST00000491523	DHX57	Q6P158	1386 aa	Known RBP	33.09	■■■□□ 2.89
RPL13-209	ENST00000491523	VGF	O15240	615 aa	Predicted RBP	33.08	■■■□□ 2.89
RPL13-209	ENST00000491523	NRXN3	Q9Y4C0	1643 aa		33.08	■■■□□ 2.89
RPL13-209	ENST00000491523	CHD2	O14647	1828 aa	Known RBP	33.07	■■■□□ 2.89
RPL13-209	ENST00000491523	XIRP1	Q702N8	1843 aa	Known RBP	33.04	■■■□□ 2.88
RPL13-209	ENST00000491523	IFT172	Q9UG01	1749 aa		33.03	■■■□□ 2.88
RPL13-209	ENST00000491523	TMEM94	Q12767	1356 aa		33.03	■■■□□ 2.88
RPL13-209	ENST00000491523	ALK	Q9UM73	1620 aa		33.02	■■■□□ 2.88
RPL13-209	ENST00000491523	NCOA3	Q9Y6Q9	1424 aa		33.02	■■■□□ 2.88
RPL13-209	ENST00000491523	PROSER2	Q86WR7	435 aa	Predicted RBP	33.01	■■■□□ 2.87
RPL13-209	ENST00000491523	ADGRF5	Q8IZF2	1346 aa		33	■■■□□ 2.87
RPL13-209	ENST00000491523	PIP4K2B	P78356	416 aa		32.96	■■■□□ 2.87
RPL13-209	ENST00000491523	SCAF1	Q9H7N4	1312 aa	Known RBP	32.94	■■■□□ 2.86
RPL13-209	ENST00000491523	MET	P08581	1390 aa		32.94	■■■□□ 2.86
RPL13-209	ENST00000491523	MYOM2	P54296	1465 aa		32.93	■■■□□ 2.86
RPL13-209	ENST00000491523	PTPRU	Q92729	1446 aa		32.92	■■■□□ 2.86
RPL13-209	ENST00000491523	MSH6	P52701	1360 aa		32.91	■■■□□ 2.86
RPL13-209	ENST00000491523	PIK3C2G	O75747	1445 aa		32.9	■■■□□ 2.86
RPL13-209	ENST00000491523	SETD1A	O15047	1707 aa	Known RBP	32.88	■■■□□ 2.85
RPL13-209	ENST00000491523	NRXN1	Q9ULB1	1477 aa		32.88	■■■□□ 2.85
RPL13-209	ENST00000491523	SIN3A	Q96ST3	1273 aa		32.88	■■■□□ 2.85
RPL13-209	ENST00000491523	DCAF11	Q8TEB1	546 aa		32.87	■■■□□ 2.85
RPL13-209	ENST00000491523	AMOTL2	Q9Y2J4	779 aa		32.86	■■■□□ 2.85
RPL13-209	ENST00000491523	FAM135B	Q49AJ0	1406 aa		32.85	■■■□□ 2.85
RPL13-209	ENST00000491523	HSPA1L	P34931	641 aa		32.84	■■■□□ 2.85
RPL13-209	ENST00000491523	KDM2A	Q9Y2K7	1162 aa		32.84	■■■□□ 2.85
RPL13-209	ENST00000491523	XRN1	Q8IZH2	1706 aa	Known RBP	32.83	■■■□□ 2.85
RPL13-209	ENST00000491523	RBM33	Q96EV2	1170 aa	Known RBP	32.83	■■■□□ 2.85
RPL13-209	ENST00000491523	NEUROD1	Q13562	356 aa		32.82	■■■□□ 2.84
RPL13-209	ENST00000491523	C19orf44	Q9H6X5	657 aa		32.78	■■■□□ 2.84
RPL13-209	ENST00000491523	STAC3	Q96MF2	364 aa		32.77	■■■□□ 2.84
RPL13-209	ENST00000491523	ASXL1	Q8IXJ9	1541 aa		32.77	■■■□□ 2.84
RPL13-209	ENST00000491523	PRAG1	Q86YV5	1406 aa		32.77	■■■□□ 2.84
RPL13-209	ENST00000491523	CFAP70	Q5T0N1	1121 aa		32.75	■■■□□ 2.83
RPL13-209	ENST00000491523	CADPS2	Q86UW7	1296 aa		32.75	■■■□□ 2.83
RPL13-209	ENST00000491523	C14orf93	Q9H972	538 aa	Known RBP	32.75	■■■□□ 2.83
RPL13-209	ENST00000491523	DCC	P43146	1447 aa		32.75	■■■□□ 2.83
RPL13-209	ENST00000491523	LAMC1	P11047	1609 aa		32.74	■■■□□ 2.83
RPL13-209	ENST00000491523	C14orf37	Q86TY3	774 aa		32.73	■■■□□ 2.83
RPL13-209	ENST00000491523	TMEM132E	Q6IEE7	984 aa		32.72	■■■□□ 2.83
RPL13-209	ENST00000491523	SLAIN2	Q9P270	581 aa		32.72	■■■□□ 2.83
RPL13-209	ENST00000491523	PTCH1	Q13635	1447 aa		32.7	■■■□□ 2.83
RPL13-209	ENST00000491523	L3MBTL2	Q969R5	705 aa		32.7	■■■□□ 2.83
RPL13-209	ENST00000491523	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.68	■■■□□ 2.82
RPL13-209	ENST00000491523	ATF3	P18847	181 aa		32.68	■■■□□ 2.82
RPL13-209	ENST00000491523	ROBO2	Q9HCK4	1378 aa		32.68	■■■□□ 2.82
RPL13-209	ENST00000491523	ROBO1	Q9Y6N7	1651 aa		32.67	■■■□□ 2.82
RPL13-209	ENST00000491523	LRPPRC	P42704	1394 aa	Known RBP	32.67	■■■□□ 2.82
RPL13-209	ENST00000491523	STK26	Q9P289	416 aa		32.66	■■■□□ 2.82
RPL13-209	ENST00000491523	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.65	■■■□□ 2.82
RPL13-209	ENST00000491523	DISP3	Q9P2K9	1392 aa		32.64	■■■□□ 2.82
RPL13-209	ENST00000491523	ADGRB1	O14514	1584 aa		32.62	■■■□□ 2.81
RPL13-209	ENST00000491523	TECPR2	O15040	1411 aa		32.62	■■■□□ 2.81
RPL13-209	ENST00000491523	ADGRL3	Q9HAR2	1447 aa		32.62	■■■□□ 2.81
RPL13-209	ENST00000491523	ABCC11	Q96J66	1382 aa		32.61	■■■□□ 2.81
RPL13-209	ENST00000491523	KNDC1	Q76NI1	1749 aa		32.6	■■■□□ 2.81
RPL13-209	ENST00000491523	TONSL	Q96HA7	1378 aa		32.59	■■■□□ 2.81
RPL13-209	ENST00000491523	NALCN	Q8IZF0	1738 aa		32.54	■■■□□ 2.8
RPL13-209	ENST00000491523	KIAA1210	Q9ULL0	1709 aa		32.53	■■■□□ 2.8
RPL13-209	ENST00000491523	MED1	Q15648	1581 aa	Predicted RBP	32.53	■■■□□ 2.8
RPL13-209	ENST00000491523	CLSPN	Q9HAW4	1339 aa		32.52	■■■□□ 2.8
RPL13-209	ENST00000491523	WAPL	Q7Z5K2	1190 aa		32.52	■■■□□ 2.8
RPL13-209	ENST00000491523	PLEKHH1	Q9ULM0	1364 aa		32.51	■■■□□ 2.79
RPL13-209	ENST00000491523	CCER1	Q8TC90	406 aa	Predicted RBP	32.51	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms