RNA–Protein interactions for RNA: ENST00000491523.5

RPL13-209, Transcript of ribosomal protein L13, humanhuman

TSL 3

Gene RPL13, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13-209ENST00000491523 NISCHQ9Y2I1 1504 aa54.66■■■■■ 6.34
RPL13-209ENST00000491523 CCDC180Q9P1Z9 1646 aa48.73■■■■■ 5.39
RPL13-209ENST00000491523 ABCC9O60706 1549 aa47.8■■■■■ 5.24
RPL13-209ENST00000491523 RB1CC1Q8TDY2 1594 aa46.01■■■■■ 4.96
RPL13-209ENST00000491523 NACADO15069 1562 aa45.92■■■■■ 4.94
RPL13-209ENST00000491523 MYO15BQ96JP2 1530 aa45.64■■■■■ 4.9
RPL13-209ENST00000491523 DCAF8L2P0C7V8 631 aa45.62■■■■■ 4.89
RPL13-209ENST00000491523 ZCCHC6Q5VYS8 1495 aaKnown RBP45.59■■■■■ 4.89
RPL13-209ENST00000491523 DCAF1Q9Y4B6 1507 aa45.28■■■■■ 4.84
RPL13-209ENST00000491523 UNC13AQ9UPW8 1703 aa44.83■■■■■ 4.77
RPL13-209ENST00000491523 PABPN1Q86U42 306 aaKnown RBP eCLIP44.57■■■■■ 4.732e-10■□□□□ 10.4
RPL13-209ENST00000491523 BICRAQ9NZM4 1560 aa44.54■■■■■ 4.72
RPL13-209ENST00000491523 SCRIBQ14160 1630 aa44.32■■■■■ 4.69
RPL13-209ENST00000491523 SHROOM4Q9ULL8 1493 aa44.31■■■■■ 4.68
RPL13-209ENST00000491523 DNAJC5BQ9UF47 199 aa44.12■■■■■ 4.65
RPL13-209ENST00000491523 EIF4G1Q04637 1599 aaKnown RBP43.42■■■■■ 4.54
RPL13-209ENST00000491523 CC2D2AQ9P2K1 1620 aa43.29■■■■■ 4.52
RPL13-209ENST00000491523 CECR2Q9BXF3 1484 aa43.07■■■■■ 4.49
RPL13-209ENST00000491523 SMARCA4P51532 1647 aa42.39■■■■■ 4.38
RPL13-209ENST00000491523 NCAPD3P42695 1498 aa42.36■■■■■ 4.37
RPL13-209ENST00000491523 BAZ1AQ9NRL2 1556 aaPredicted RBP42.36■■■■■ 4.37
RPL13-209ENST00000491523 SMARCA2P51531 1590 aa42.27■■■■■ 4.36
RPL13-209ENST00000491523 ATAD2BQ9ULI0 1458 aa42.26■■■■■ 4.36
RPL13-209ENST00000491523 MROH2BQ7Z745 1585 aa42.16■■■■■ 4.34
RPL13-209ENST00000491523 HMGXB3Q12766 1538 aa42.12■■■■■ 4.33
RPL13-209ENST00000491523 PEG3Q9GZU2 1588 aa42.09■■■■■ 4.33
RPL13-209ENST00000491523 BAZ1BQ9UIG0 1483 aaKnown RBP41.89■■■■■ 4.3
RPL13-209ENST00000491523 RSF1Q96T23 1441 aaPredicted RBP41.72■■■■■ 4.27
RPL13-209ENST00000491523 WIZO95785 1651 aa41.7■■■■■ 4.27
RPL13-209ENST00000491523 ERCC6Q03468 1493 aa41.31■■■■■ 4.2
RPL13-209ENST00000491523 LAMC3Q9Y6N6 1575 aa41.29■■■■■ 4.2
RPL13-209ENST00000491523 TOP2AP11388 1531 aaKnown RBP41.28■■■■■ 4.2
RPL13-209ENST00000491523 NESP48681 1621 aa41.24■■■■■ 4.19
RPL13-209ENST00000491523 CUX2O14529 1486 aa41.11■■■■■ 4.17
RPL13-209ENST00000491523 CADPSQ9ULU8 1353 aa41.07■■■■■ 4.16
RPL13-209ENST00000491523 PDS5BQ9NTI5 1447 aa41.03■■■■■ 4.16
RPL13-209ENST00000491523 SUPT5HO00267 1087 aaKnown RBP40.82■■■■■ 4.13
RPL13-209ENST00000491523 THOC2Q8NI27 1593 aaKnown RBP40.79■■■■■ 4.12
RPL13-209ENST00000491523 KIF21AQ7Z4S6 1674 aa40.78■■■■■ 4.12
RPL13-209ENST00000491523 CCDC88BA6NC98 1476 aa40.78■■■■■ 4.12
RPL13-209ENST00000491523 CFTRP13569 1480 aa40.77■■■■■ 4.12
RPL13-209ENST00000491523 MRC2Q9UBG0 1479 aa40.58■■■■■ 4.09
RPL13-209ENST00000491523 FANCD2Q9BXW9 1451 aa40.56■■■■■ 4.08
RPL13-209ENST00000491523 CEP164Q9UPV0 1460 aa40.56■■■■■ 4.08
RPL13-209ENST00000491523 WDR62O43379 1518 aa40.47■■■■■ 4.07
RPL13-209ENST00000491523 PRDM2Q13029 1718 aa40.42■■■■■ 4.06
RPL13-209ENST00000491523 DNAJC5Q9H3Z4 198 aa40.16■■■■■ 4.02
RPL13-209ENST00000491523 URB2Q14146 1524 aaKnown RBP40.13■■■■■ 4.01
RPL13-209ENST00000491523 ABCC8Q09428 1581 aa40■■■■□ 3.99
RPL13-209ENST00000491523 TOPBP1Q92547 1522 aa39.86■■■■□ 3.97
RPL13-209ENST00000491523 DNMBPQ6XZF7 1577 aa39.82■■■■□ 3.97
RPL13-209ENST00000491523 IFT140Q96RY7 1462 aa39.76■■■■□ 3.96
RPL13-209ENST00000491523 CUX1P39880 1505 aa39.53■■■■□ 3.92
RPL13-209ENST00000491523 POLA1P09884 1462 aaPredicted RBP39.5■■■■□ 3.91
RPL13-209ENST00000491523 ZNF608Q9ULD9 1512 aaPredicted RBP39.47■■■■□ 3.91
RPL13-209ENST00000491523 TARBP1Q13395 1621 aaKnown RBP39.46■■■■□ 3.91
RPL13-209ENST00000491523 FGD5Q6ZNL6 1462 aa39.37■■■■□ 3.89
RPL13-209ENST00000491523 EIF4G3O43432 1585 aaKnown RBP39.34■■■■□ 3.89
RPL13-209ENST00000491523 SOGA1O94964 1423 aa39.34■■■■□ 3.89
RPL13-209ENST00000491523 WRNQ14191 1432 aaPredicted RBP eCLIP39.34■■■■□ 3.89
RPL13-209ENST00000491523 WDR97A6NE52 1622 aa39.31■■■■□ 3.88
RPL13-209ENST00000491523 OSCARQ8IYS5 282 aa39.29■■■■□ 3.88
RPL13-209ENST00000491523 RAD54L2Q9Y4B4 1467 aa39.28■■■■□ 3.88
RPL13-209ENST00000491523 SYNJ1O43426 1573 aa39.25■■■■□ 3.87
RPL13-209ENST00000491523 TOP2BQ02880 1626 aa39.22■■■■□ 3.87
RPL13-209ENST00000491523 AQRO60306 1485 aaKnown RBP eCLIP39.21■■■■□ 3.872e-12■■■■■ 28.1
RPL13-209ENST00000491523 BIVM-ERCC5R4GMW8 1640 aa39.21■■■■□ 3.87
RPL13-209ENST00000491523 TDRD9Q8NDG6 1382 aaKnown RBP39.08■■■■□ 3.85
RPL13-209ENST00000491523 ABCA10Q8WWZ4 1543 aa39.02■■■■□ 3.84
RPL13-209ENST00000491523 GRIN2BQ13224 1484 aa38.97■■■■□ 3.83
RPL13-209ENST00000491523 MAGI1Q96QZ7 1491 aaPredicted RBP38.93■■■■□ 3.82
RPL13-209ENST00000491523 GAPVD1Q14C86 1478 aa38.9■■■■□ 3.82
RPL13-209ENST00000491523 CHD1O14646 1710 aa38.88■■■■□ 3.81
RPL13-209ENST00000491523 SNAPC4Q5SXM2 1469 aa38.87■■■■□ 3.81
RPL13-209ENST00000491523 ABCA5Q8WWZ7 1642 aa38.85■■■■□ 3.81
RPL13-209ENST00000491523 PBRM1Q86U86 1689 aa38.78■■■■□ 3.8
RPL13-209ENST00000491523 FBLN2P98095 1184 aa38.77■■■■□ 3.8
RPL13-209ENST00000491523 SYNJ2O15056 1496 aa38.76■■■■□ 3.8
RPL13-209ENST00000491523 CHMP7Q8WUX9 453 aaPredicted RBP38.72■■■■□ 3.79
RPL13-209ENST00000491523 RIMBP3CA6NJZ7 1639 aa38.61■■■■□ 3.77
RPL13-209ENST00000491523 RIMBP3BA6NNM3 1639 aa38.61■■■■□ 3.77
RPL13-209ENST00000491523 RIMBP3Q9UFD9 1639 aa38.61■■■■□ 3.77
RPL13-209ENST00000491523 ARHGEF11O15085 1522 aa38.6■■■■□ 3.77
RPL13-209ENST00000491523 ERICH3Q5RHP9 1530 aa38.57■■■■□ 3.76
RPL13-209ENST00000491523 CLASP1Q7Z460 1538 aa38.53■■■■□ 3.76
RPL13-209ENST00000491523 TRIM41Q8WV44 630 aa38.52■■■■□ 3.76
RPL13-209ENST00000491523 ADAMTS12P58397 1594 aa38.49■■■■□ 3.75
RPL13-209ENST00000491523 KIF27Q86VH2 1401 aa38.48■■■■□ 3.75
RPL13-209ENST00000491523 FHAD1B1AJZ9 1412 aa38.47■■■■□ 3.75
RPL13-209ENST00000491523 GRIN2AQ12879 1464 aa38.44■■■■□ 3.74
RPL13-209ENST00000491523 NUP160Q12769 1436 aa38.32■■■■□ 3.73
RPL13-209ENST00000491523 IGF1RP08069 1367 aa38.31■■■■□ 3.72
RPL13-209ENST00000491523 ARAP1Q96P48 1450 aa38.24■■■■□ 3.71
RPL13-209ENST00000491523 RUSC2Q8N2Y8 1516 aa38.23■■■■□ 3.71
RPL13-209ENST00000491523 CYB5RLQ6IPT4 315 aa38.21■■■■□ 3.71
RPL13-209ENST00000491523 CEP170Q5SW79 1584 aa38.2■■■■□ 3.71
RPL13-209ENST00000491523 CUL7Q14999 1698 aa38.2■■■■□ 3.71
RPL13-209ENST00000491523 CHIC1Q5VXU3 224 aa38.18■■■■□ 3.7
RPL13-209ENST00000491523 CARMIL1Q5VZK9 1371 aa38.08■■■■□ 3.69
RPL13-209ENST00000491523 SHROOM2Q13796 1616 aa38.05■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms