RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 ANKRD30BQ9BXX2 1392 aa28.72■■■□□ 2.19
SEC22A-209ENST00000491366 ZFYVE9O95405 1425 aa28.71■■■□□ 2.19
SEC22A-209ENST00000491366 PPP1R15AO75807 674 aaPredicted RBP28.71■■■□□ 2.19
SEC22A-209ENST00000491366 NUTM2DQ5VT03 806 aaPredicted RBP28.71■■■□□ 2.19
SEC22A-209ENST00000491366 SENP3Q9H4L4 574 aaPredicted RBP28.7■■■□□ 2.18
SEC22A-209ENST00000491366 MED14O60244 1454 aa28.7■■■□□ 2.18
SEC22A-209ENST00000491366 HDGFP51858 240 aaKnown RBP28.68■■■□□ 2.18
SEC22A-209ENST00000491366 IQGAP1P46940 1657 aa28.67■■■□□ 2.18
SEC22A-209ENST00000491366 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.66■■■□□ 2.18
SEC22A-209ENST00000491366 BCANQ96GW7 911 aa28.65■■■□□ 2.18
SEC22A-209ENST00000491366 RGL3Q3MIN7 710 aa28.64■■■□□ 2.18
SEC22A-209ENST00000491366 DHX57Q6P158 1386 aaKnown RBP28.63■■■□□ 2.17
SEC22A-209ENST00000491366 SPATA31E1Q6ZUB1 1445 aa28.61■■■□□ 2.17
SEC22A-209ENST00000491366 NEXMIFQ5QGS0 1516 aa28.61■■■□□ 2.17
SEC22A-209ENST00000491366 PLEKHG1Q9ULL1 1385 aa28.59■■■□□ 2.17
SEC22A-209ENST00000491366 RPGRIP1LQ68CZ1 1315 aa28.56■■■□□ 2.16
SEC22A-209ENST00000491366 SLC26A8Q96RN1 970 aa28.56■■■□□ 2.16
SEC22A-209ENST00000491366 ZNF335Q9H4Z2 1342 aaPredicted RBP28.56■■■□□ 2.16
SEC22A-209ENST00000491366 PPLO60437 1756 aa28.52■■■□□ 2.16
SEC22A-209ENST00000491366 VGFO15240 615 aaPredicted RBP28.51■■■□□ 2.15
SEC22A-209ENST00000491366 SIN3AQ96ST3 1273 aa28.47■■■□□ 2.15
SEC22A-209ENST00000491366 ADAMTS13Q76LX8 1427 aa28.46■■■□□ 2.15
SEC22A-209ENST00000491366 IFT172Q9UG01 1749 aa28.46■■■□□ 2.15
SEC22A-209ENST00000491366 LTBP4Q8N2S1 1624 aa28.45■■■□□ 2.14
SEC22A-209ENST00000491366 SETBP1Q9Y6X0 1596 aa28.45■■■□□ 2.14
SEC22A-209ENST00000491366 NRXN3Q9Y4C0 1643 aa28.44■■■□□ 2.14
SEC22A-209ENST00000491366 NEUROD1Q13562 356 aa28.44■■■□□ 2.14
SEC22A-209ENST00000491366 ADGRF5Q8IZF2 1346 aa28.43■■■□□ 2.14
SEC22A-209ENST00000491366 TBX22Q9Y458 520 aa28.43■■■□□ 2.14
SEC22A-209ENST00000491366 DIP2AQ14689 1571 aa28.42■■■□□ 2.14
SEC22A-209ENST00000491366 DCAF11Q8TEB1 546 aa28.4■■■□□ 2.14
SEC22A-209ENST00000491366 KDM2AQ9Y2K7 1162 aa28.4■■■□□ 2.14
SEC22A-209ENST00000491366 STRCP1A6NGW2 1772 aa28.38■■■□□ 2.13
SEC22A-209ENST00000491366 CERKQ8TCT0 537 aa28.37■■■□□ 2.13
SEC22A-209ENST00000491366 MYOM2P54296 1465 aa28.37■■■□□ 2.13
SEC22A-209ENST00000491366 CPS1P31327 1500 aa28.37■■■□□ 2.13
SEC22A-209ENST00000491366 KCNA6P17658 529 aa28.36■■■□□ 2.13
SEC22A-209ENST00000491366 ALKQ9UM73 1620 aa28.34■■■□□ 2.13
SEC22A-209ENST00000491366 METP08581 1390 aa28.34■■■□□ 2.13
SEC22A-209ENST00000491366 PIK3C2GO75747 1445 aa28.34■■■□□ 2.13
SEC22A-209ENST00000491366 NWD1Q149M9 1564 aa28.32■■■□□ 2.12
SEC22A-209ENST00000491366 PIK3R4Q99570 1358 aa28.31■■■□□ 2.12
SEC22A-209ENST00000491366 NRXN1Q9ULB1 1477 aa28.31■■■□□ 2.12
SEC22A-209ENST00000491366 CHD2O14647 1828 aaKnown RBP28.29■■■□□ 2.12
SEC22A-209ENST00000491366 PTPRUQ92729 1446 aa28.29■■■□□ 2.12
SEC22A-209ENST00000491366 SETD1AO15047 1707 aaKnown RBP28.29■■■□□ 2.12
SEC22A-209ENST00000491366 LRRC7Q96NW7 1537 aa28.28■■■□□ 2.12
SEC22A-209ENST00000491366 L3MBTL2Q969R5 705 aa28.28■■■□□ 2.12
SEC22A-209ENST00000491366 AMOTL2Q9Y2J4 779 aa28.28■■■□□ 2.12
SEC22A-209ENST00000491366 PROSER2Q86WR7 435 aaPredicted RBP28.26■■■□□ 2.11
SEC22A-209ENST00000491366 CCER1Q8TC90 406 aaPredicted RBP28.26■■■□□ 2.11
SEC22A-209ENST00000491366 STAC3Q96MF2 364 aa28.26■■■□□ 2.11
SEC22A-209ENST00000491366 NKTRP30414 1462 aaKnown RBP28.26■■■□□ 2.11
SEC22A-209ENST00000491366 CFAP70Q5T0N1 1121 aa28.25■■■□□ 2.11
SEC22A-209ENST00000491366 RBM33Q96EV2 1170 aaKnown RBP28.25■■■□□ 2.11
SEC22A-209ENST00000491366 C14orf93Q9H972 538 aaKnown RBP28.23■■■□□ 2.11
SEC22A-209ENST00000491366 TMEM132EQ6IEE7 984 aa28.22■■■□□ 2.11
SEC22A-209ENST00000491366 TONSLQ96HA7 1378 aa28.22■■■□□ 2.11
SEC22A-209ENST00000491366 XRN1Q8IZH2 1706 aaKnown RBP28.21■■■□□ 2.11
SEC22A-209ENST00000491366 TMEM94Q12767 1356 aa28.21■■■□□ 2.11
SEC22A-209ENST00000491366 LAMC1P11047 1609 aa28.21■■■□□ 2.11
SEC22A-209ENST00000491366 ASXL1Q8IXJ9 1541 aa28.2■■■□□ 2.1
SEC22A-209ENST00000491366 IQSEC2Q5JU85 1478 aa28.2■■■□□ 2.1
SEC22A-209ENST00000491366 STK26Q9P289 416 aa28.18■■■□□ 2.1
SEC22A-209ENST00000491366 PRAG1Q86YV5 1406 aa28.17■■■□□ 2.1
SEC22A-209ENST00000491366 CLSPNQ9HAW4 1339 aa28.17■■■□□ 2.1
SEC22A-209ENST00000491366 XIRP1Q702N8 1843 aaKnown RBP28.14■■■□□ 2.1
SEC22A-209ENST00000491366 C14orf37Q86TY3 774 aa28.14■■■□□ 2.1
SEC22A-209ENST00000491366 LRPPRCP42704 1394 aaKnown RBP28.13■■■□□ 2.09
SEC22A-209ENST00000491366 YTHDC2Q9H6S0 1430 aaKnown RBP28.12■■■□□ 2.09
SEC22A-209ENST00000491366 ROBO2Q9HCK4 1378 aa28.11■■■□□ 2.09
SEC22A-209ENST00000491366 PTCH1Q13635 1447 aa28.1■■■□□ 2.09
SEC22A-209ENST00000491366 UBAP1LF5GYI3 381 aa28.1■■■□□ 2.09
SEC22A-209ENST00000491366 ADGRB1O14514 1584 aa28.09■■■□□ 2.09
SEC22A-209ENST00000491366 MSH6P52701 1360 aa28.07■■■□□ 2.08
SEC22A-209ENST00000491366 ABCC11Q96J66 1382 aa28.07■■■□□ 2.08
SEC22A-209ENST00000491366 FBXO41Q8TF61 875 aa28.06■■■□□ 2.08
SEC22A-209ENST00000491366 TECPR2O15040 1411 aa28.06■■■□□ 2.08
SEC22A-209ENST00000491366 NCOA3Q9Y6Q9 1424 aa28.05■■■□□ 2.08
SEC22A-209ENST00000491366 KNDC1Q76NI1 1749 aa28.04■■■□□ 2.08
SEC22A-209ENST00000491366 KIAA1210Q9ULL0 1709 aa28.04■■■□□ 2.08
SEC22A-209ENST00000491366 NBPF1Q3BBV0 1214 aa28.04■■■□□ 2.08
SEC22A-209ENST00000491366 TOM1O60784 492 aa28.03■■■□□ 2.08
SEC22A-209ENST00000491366 NBPF8Q3BBV2 869 aa28.03■■■□□ 2.08
SEC22A-209ENST00000491366 TRAK1Q9UPV9 953 aa28.03■■■□□ 2.08
SEC22A-209ENST00000491366 WAPLQ7Z5K2 1190 aa28.02■■■□□ 2.08
SEC22A-209ENST00000491366 PLEKHH1Q9ULM0 1364 aa28■■■□□ 2.07
SEC22A-209ENST00000491366 SCAF1Q9H7N4 1312 aaKnown RBP28■■■□□ 2.07
SEC22A-209ENST00000491366 PIP4K2BP78356 416 aa28■■■□□ 2.07
SEC22A-209ENST00000491366 C19orf44Q9H6X5 657 aa28■■■□□ 2.07
SEC22A-209ENST00000491366 TRPM1Q7Z4N2 1603 aa28■■■□□ 2.07
SEC22A-209ENST00000491366 ADGRL3Q9HAR2 1447 aa27.99■■■□□ 2.07
SEC22A-209ENST00000491366 NALCNQ8IZF0 1738 aa27.98■■■□□ 2.07
SEC22A-209ENST00000491366 SAFB2Q14151 953 aaKnown RBP eCLIP27.97■■■□□ 2.07
SEC22A-209ENST00000491366 PRAM1Q96QH2 718 aa27.97■■■□□ 2.07
SEC22A-209ENST00000491366 FAM135BQ49AJ0 1406 aa27.97■■■□□ 2.07
SEC22A-209ENST00000491366 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.97■■■□□ 2.07
SEC22A-209ENST00000491366 ROCK2O75116 1388 aaKnown RBP27.97■■■□□ 2.07
SEC22A-209ENST00000491366 DLC1Q96QB1 1528 aa27.97■■■□□ 2.07
SEC22A-209ENST00000491366 ATF3P18847 181 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms