RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 FOXD1Q16676 465 aa27.64■■■□□ 2.02
NDUFB4-204ENST00000491335 SLC26A8Q96RN1 970 aa27.64■■■□□ 2.02
NDUFB4-204ENST00000491335 MPHOSPH9Q99550 1183 aa27.64■■■□□ 2.02
NDUFB4-204ENST00000491335 SENP3Q9H4L4 574 aaPredicted RBP27.64■■■□□ 2.02
NDUFB4-204ENST00000491335 STRCP1A6NGW2 1772 aa27.63■■■□□ 2.01
NDUFB4-204ENST00000491335 TRPM2O94759 1503 aa27.63■■■□□ 2.01
NDUFB4-204ENST00000491335 NUTM2DQ5VT03 806 aaPredicted RBP27.63■■■□□ 2.01
NDUFB4-204ENST00000491335 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.63■■■□□ 2.01
NDUFB4-204ENST00000491335 BCANQ96GW7 911 aa27.63■■■□□ 2.01
NDUFB4-204ENST00000491335 CLTCL1P53675 1640 aa27.63■■■□□ 2.01
NDUFB4-204ENST00000491335 RAB3GAP2Q9H2M9 1393 aa27.6■■■□□ 2.01
NDUFB4-204ENST00000491335 ACIN1Q9UKV3 1341 aaKnown RBP27.6■■■□□ 2.01
NDUFB4-204ENST00000491335 PLEKHG1Q9ULL1 1385 aa27.59■■■□□ 2.01
NDUFB4-204ENST00000491335 ZNF326Q5BKZ1 582 aaKnown RBP27.57■■■□□ 2
NDUFB4-204ENST00000491335 KIF1BO60333 1816 aa27.57■■■□□ 2
NDUFB4-204ENST00000491335 UBAP1LF5GYI3 381 aa27.54■■■□□ 2
NDUFB4-204ENST00000491335 LRRC7Q96NW7 1537 aa27.52■■■□□ 2
NDUFB4-204ENST00000491335 KCNA6P17658 529 aa27.52■■■□□ 2
NDUFB4-204ENST00000491335 TBX22Q9Y458 520 aa27.5■■□□□ 1.99
NDUFB4-204ENST00000491335 ADAMTS13Q76LX8 1427 aa27.47■■□□□ 1.99
NDUFB4-204ENST00000491335 HRCP23327 699 aa27.46■■□□□ 1.99
NDUFB4-204ENST00000491335 NEXMIFQ5QGS0 1516 aa27.45■■□□□ 1.98
NDUFB4-204ENST00000491335 CHD2O14647 1828 aaKnown RBP27.44■■□□□ 1.98
NDUFB4-204ENST00000491335 CCDC144AA2RUR9 1427 aa27.43■■□□□ 1.98
NDUFB4-204ENST00000491335 TOM1O60784 492 aa27.43■■□□□ 1.98
NDUFB4-204ENST00000491335 XIRP1Q702N8 1843 aaKnown RBP27.42■■□□□ 1.98
NDUFB4-204ENST00000491335 PROSER2Q86WR7 435 aaPredicted RBP27.42■■□□□ 1.98
NDUFB4-204ENST00000491335 NWD1Q149M9 1564 aa27.4■■□□□ 1.98
NDUFB4-204ENST00000491335 RPGRIP1LQ68CZ1 1315 aa27.4■■□□□ 1.98
NDUFB4-204ENST00000491335 DIP2AQ14689 1571 aa27.39■■□□□ 1.98
NDUFB4-204ENST00000491335 RBM33Q96EV2 1170 aaKnown RBP27.39■■□□□ 1.98
NDUFB4-204ENST00000491335 NRXN3Q9Y4C0 1643 aa27.38■■□□□ 1.97
NDUFB4-204ENST00000491335 TMEM94Q12767 1356 aa27.38■■□□□ 1.97
NDUFB4-204ENST00000491335 VGFO15240 615 aaPredicted RBP27.38■■□□□ 1.97
NDUFB4-204ENST00000491335 PIP4K2BP78356 416 aa27.37■■□□□ 1.97
NDUFB4-204ENST00000491335 RGL3Q3MIN7 710 aa27.37■■□□□ 1.97
NDUFB4-204ENST00000491335 SETBP1Q9Y6X0 1596 aa27.37■■□□□ 1.97
NDUFB4-204ENST00000491335 NKTRP30414 1462 aaKnown RBP27.36■■□□□ 1.97
NDUFB4-204ENST00000491335 SCAF1Q9H7N4 1312 aaKnown RBP27.36■■□□□ 1.97
NDUFB4-204ENST00000491335 PIK3R4Q99570 1358 aa27.35■■□□□ 1.97
NDUFB4-204ENST00000491335 ALKQ9UM73 1620 aa27.34■■□□□ 1.97
NDUFB4-204ENST00000491335 SPATA31E1Q6ZUB1 1445 aa27.34■■□□□ 1.97
NDUFB4-204ENST00000491335 PPLO60437 1756 aa27.34■■□□□ 1.97
NDUFB4-204ENST00000491335 AMOTL2Q9Y2J4 779 aa27.32■■□□□ 1.96
NDUFB4-204ENST00000491335 PTPRUQ92729 1446 aa27.32■■□□□ 1.96
NDUFB4-204ENST00000491335 METP08581 1390 aa27.3■■□□□ 1.96
NDUFB4-204ENST00000491335 ANKRD30BQ9BXX2 1392 aa27.3■■□□□ 1.96
NDUFB4-204ENST00000491335 ADGRF5Q8IZF2 1346 aa27.25■■□□□ 1.95
NDUFB4-204ENST00000491335 IFT172Q9UG01 1749 aa27.23■■□□□ 1.95
NDUFB4-204ENST00000491335 XRN1Q8IZH2 1706 aaKnown RBP27.22■■□□□ 1.95
NDUFB4-204ENST00000491335 MSH6P52701 1360 aa27.22■■□□□ 1.95
NDUFB4-204ENST00000491335 HSPA1LP34931 641 aa27.21■■□□□ 1.95
NDUFB4-204ENST00000491335 C14orf37Q86TY3 774 aa27.21■■□□□ 1.95
NDUFB4-204ENST00000491335 SETD1AO15047 1707 aaKnown RBP27.21■■□□□ 1.95
NDUFB4-204ENST00000491335 NCOA3Q9Y6Q9 1424 aa27.2■■□□□ 1.94
NDUFB4-204ENST00000491335 C19orf44Q9H6X5 657 aa27.15■■□□□ 1.94
NDUFB4-204ENST00000491335 TRIM26Q12899 539 aaPredicted RBP27.13■■□□□ 1.93
NDUFB4-204ENST00000491335 SLAIN2Q9P270 581 aa27.13■■□□□ 1.93
NDUFB4-204ENST00000491335 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.13■■□□□ 1.93
NDUFB4-204ENST00000491335 PIK3C2GO75747 1445 aa27.11■■□□□ 1.93
NDUFB4-204ENST00000491335 FAM135BQ49AJ0 1406 aa27.11■■□□□ 1.93
NDUFB4-204ENST00000491335 ATF3P18847 181 aa27.09■■□□□ 1.93
NDUFB4-204ENST00000491335 MYOM2P54296 1465 aa27.08■■□□□ 1.93
NDUFB4-204ENST00000491335 CADPS2Q86UW7 1296 aa27.08■■□□□ 1.93
NDUFB4-204ENST00000491335 NRXN1Q9ULB1 1477 aa27.07■■□□□ 1.92
NDUFB4-204ENST00000491335 TMEM132EQ6IEE7 984 aa27.07■■□□□ 1.92
NDUFB4-204ENST00000491335 KDM2AQ9Y2K7 1162 aa27.07■■□□□ 1.92
NDUFB4-204ENST00000491335 ROBO2Q9HCK4 1378 aa27.07■■□□□ 1.92
NDUFB4-204ENST00000491335 DCAF11Q8TEB1 546 aa27.06■■□□□ 1.92
NDUFB4-204ENST00000491335 C14orf93Q9H972 538 aaKnown RBP27.06■■□□□ 1.92
NDUFB4-204ENST00000491335 ROBO1Q9Y6N7 1651 aa27.05■■□□□ 1.92
NDUFB4-204ENST00000491335 STK26Q9P289 416 aa27.05■■□□□ 1.92
NDUFB4-204ENST00000491335 PTCH1Q13635 1447 aa27.05■■□□□ 1.92
NDUFB4-204ENST00000491335 CFAP70Q5T0N1 1121 aa27.04■■□□□ 1.92
NDUFB4-204ENST00000491335 PRAG1Q86YV5 1406 aa27.03■■□□□ 1.92
NDUFB4-204ENST00000491335 ASXL1Q8IXJ9 1541 aa27.02■■□□□ 1.92
NDUFB4-204ENST00000491335 ADGRL3Q9HAR2 1447 aa27.02■■□□□ 1.92
NDUFB4-204ENST00000491335 LRPPRCP42704 1394 aaKnown RBP27.01■■□□□ 1.91
NDUFB4-204ENST00000491335 DHX57Q6P158 1386 aaKnown RBP27.01■■□□□ 1.91
NDUFB4-204ENST00000491335 DCCP43146 1447 aa27■■□□□ 1.91
NDUFB4-204ENST00000491335 NALCNQ8IZF0 1738 aa27■■□□□ 1.91
NDUFB4-204ENST00000491335 STAC3Q96MF2 364 aa26.99■■□□□ 1.91
NDUFB4-204ENST00000491335 ABCC11Q96J66 1382 aa26.98■■□□□ 1.91
NDUFB4-204ENST00000491335 TECPR2O15040 1411 aa26.97■■□□□ 1.91
NDUFB4-204ENST00000491335 YTHDC2Q9H6S0 1430 aaKnown RBP26.97■■□□□ 1.91
NDUFB4-204ENST00000491335 WAPLQ7Z5K2 1190 aa26.96■■□□□ 1.91
NDUFB4-204ENST00000491335 LAMC1P11047 1609 aa26.96■■□□□ 1.91
NDUFB4-204ENST00000491335 MST1RQ04912 1400 aa26.94■■□□□ 1.9
NDUFB4-204ENST00000491335 KNDC1Q76NI1 1749 aa26.93■■□□□ 1.9
NDUFB4-204ENST00000491335 SIN3AQ96ST3 1273 aa26.92■■□□□ 1.9
NDUFB4-204ENST00000491335 DISP3Q9P2K9 1392 aa26.92■■□□□ 1.9
NDUFB4-204ENST00000491335 BRINP3Q76B58 766 aa26.91■■□□□ 1.9
NDUFB4-204ENST00000491335 PLEKHH1Q9ULM0 1364 aa26.9■■□□□ 1.9
NDUFB4-204ENST00000491335 PHLPP1O60346 1717 aa26.9■■□□□ 1.9
NDUFB4-204ENST00000491335 SIRT1Q96EB6 747 aa26.89■■□□□ 1.9
NDUFB4-204ENST00000491335 NEUROD1Q13562 356 aa26.87■■□□□ 1.89
NDUFB4-204ENST00000491335 ADGRB1O14514 1584 aa26.87■■□□□ 1.89
NDUFB4-204ENST00000491335 C1orf167Q5SNV9 1468 aa26.85■■□□□ 1.89
NDUFB4-204ENST00000491335 L3MBTL2Q969R5 705 aa26.83■■□□□ 1.89
NDUFB4-204ENST00000491335 MED1Q15648 1581 aaPredicted RBP26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms