RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 NUTM2DQ5VT03 806 aaPredicted RBP19.69■□□□□ 0.74
SHC1-211ENST00000490667 ZFYVE9O95405 1425 aa19.68■□□□□ 0.74
SHC1-211ENST00000490667 TOM1O60784 492 aa19.67■□□□□ 0.74
SHC1-211ENST00000490667 KCNA6P17658 529 aa19.66■□□□□ 0.74
SHC1-211ENST00000490667 PLEKHG1Q9ULL1 1385 aa19.66■□□□□ 0.74
SHC1-211ENST00000490667 TMEM131LA2VDJ0 1609 aa19.65■□□□□ 0.74
SHC1-211ENST00000490667 ZNF326Q5BKZ1 582 aaKnown RBP19.65■□□□□ 0.74
SHC1-211ENST00000490667 TBX22Q9Y458 520 aa19.64■□□□□ 0.73
SHC1-211ENST00000490667 LRRC7Q96NW7 1537 aa19.64■□□□□ 0.73
SHC1-211ENST00000490667 PIP4K2BP78356 416 aa19.63■□□□□ 0.73
SHC1-211ENST00000490667 MPHOSPH9Q99550 1183 aa19.62■□□□□ 0.73
SHC1-211ENST00000490667 SETD5Q9C0A6 1442 aa19.61■□□□□ 0.73
SHC1-211ENST00000490667 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
SHC1-211ENST00000490667 ACIN1Q9UKV3 1341 aaKnown RBP19.61■□□□□ 0.73
SHC1-211ENST00000490667 FOXD1Q16676 465 aa19.61■□□□□ 0.73
SHC1-211ENST00000490667 PROSER2Q86WR7 435 aaPredicted RBP19.61■□□□□ 0.73
SHC1-211ENST00000490667 TRPM2O94759 1503 aa19.56■□□□□ 0.72
SHC1-211ENST00000490667 RBM33Q96EV2 1170 aaKnown RBP19.56■□□□□ 0.72
SHC1-211ENST00000490667 STRCP1A6NGW2 1772 aa19.56■□□□□ 0.72
SHC1-211ENST00000490667 TMEM94Q12767 1356 aa19.56■□□□□ 0.72
SHC1-211ENST00000490667 SPHKAPQ2M3C7 1700 aa19.54■□□□□ 0.72
SHC1-211ENST00000490667 ADAMTS13Q76LX8 1427 aa19.54■□□□□ 0.72
SHC1-211ENST00000490667 MYO5BQ9ULV0 1848 aa19.53■□□□□ 0.72
SHC1-211ENST00000490667 HSPA1LP34931 641 aa19.52■□□□□ 0.72
SHC1-211ENST00000490667 RAB3GAP2Q9H2M9 1393 aa19.52■□□□□ 0.72
SHC1-211ENST00000490667 RPGRIP1LQ68CZ1 1315 aa19.51■□□□□ 0.71
SHC1-211ENST00000490667 CLTCL1P53675 1640 aa19.51■□□□□ 0.71
SHC1-211ENST00000490667 VGFO15240 615 aaPredicted RBP19.51■□□□□ 0.71
SHC1-211ENST00000490667 PIK3R4Q99570 1358 aa19.5■□□□□ 0.71
SHC1-211ENST00000490667 AMOTL2Q9Y2J4 779 aa19.5■□□□□ 0.71
SHC1-211ENST00000490667 HRCP23327 699 aa19.48■□□□□ 0.71
SHC1-211ENST00000490667 NKTRP30414 1462 aaKnown RBP19.48■□□□□ 0.71
SHC1-211ENST00000490667 RGL3Q3MIN7 710 aa19.47■□□□□ 0.71
SHC1-211ENST00000490667 CCDC144AA2RUR9 1427 aa19.47■□□□□ 0.71
SHC1-211ENST00000490667 ALKQ9UM73 1620 aa19.46■□□□□ 0.71
SHC1-211ENST00000490667 NWD1Q149M9 1564 aa19.45■□□□□ 0.7
SHC1-211ENST00000490667 PTPRUQ92729 1446 aa19.44■□□□□ 0.7
SHC1-211ENST00000490667 C14orf37Q86TY3 774 aa19.44■□□□□ 0.7
SHC1-211ENST00000490667 NEXMIFQ5QGS0 1516 aa19.44■□□□□ 0.7
SHC1-211ENST00000490667 DIP2AQ14689 1571 aa19.44■□□□□ 0.7
SHC1-211ENST00000490667 METP08581 1390 aa19.44■□□□□ 0.7
SHC1-211ENST00000490667 MSH6P52701 1360 aa19.44■□□□□ 0.7
SHC1-211ENST00000490667 NCOA3Q9Y6Q9 1424 aa19.42■□□□□ 0.7
SHC1-211ENST00000490667 SETBP1Q9Y6X0 1596 aa19.41■□□□□ 0.7
SHC1-211ENST00000490667 C19orf44Q9H6X5 657 aa19.41■□□□□ 0.7
SHC1-211ENST00000490667 SLAIN2Q9P270 581 aa19.41■□□□□ 0.7
SHC1-211ENST00000490667 FAM135BQ49AJ0 1406 aa19.4■□□□□ 0.7
SHC1-211ENST00000490667 CHD2O14647 1828 aaKnown RBP19.39■□□□□ 0.7
SHC1-211ENST00000490667 SPATA31E1Q6ZUB1 1445 aa19.39■□□□□ 0.69
SHC1-211ENST00000490667 KIF1BO60333 1816 aa19.39■□□□□ 0.69
SHC1-211ENST00000490667 ADGRF5Q8IZF2 1346 aa19.38■□□□□ 0.69
SHC1-211ENST00000490667 DISP3Q9P2K9 1392 aa19.38■□□□□ 0.69
SHC1-211ENST00000490667 XIRP1Q702N8 1843 aaKnown RBP19.37■□□□□ 0.69
SHC1-211ENST00000490667 ATF3P18847 181 aa19.37■□□□□ 0.69
SHC1-211ENST00000490667 NRXN3Q9Y4C0 1643 aa19.36■□□□□ 0.69
SHC1-211ENST00000490667 ANKRD30BQ9BXX2 1392 aa19.36■□□□□ 0.69
SHC1-211ENST00000490667 CADPS2Q86UW7 1296 aa19.36■□□□□ 0.69
SHC1-211ENST00000490667 TMEM132EQ6IEE7 984 aa19.27■□□□□ 0.68
SHC1-211ENST00000490667 STK26Q9P289 416 aa19.27■□□□□ 0.68
SHC1-211ENST00000490667 XRN1Q8IZH2 1706 aaKnown RBP19.27■□□□□ 0.68
SHC1-211ENST00000490667 ROBO2Q9HCK4 1378 aa19.27■□□□□ 0.68
SHC1-211ENST00000490667 C14orf93Q9H972 538 aaKnown RBP19.26■□□□□ 0.67
SHC1-211ENST00000490667 PPLO60437 1756 aa19.25■□□□□ 0.67
SHC1-211ENST00000490667 DCCP43146 1447 aa19.25■□□□□ 0.67
SHC1-211ENST00000490667 CFAP70Q5T0N1 1121 aa19.24■□□□□ 0.67
SHC1-211ENST00000490667 PTCH1Q13635 1447 aa19.24■□□□□ 0.67
SHC1-211ENST00000490667 ILDR2Q71H61 639 aa19.23■□□□□ 0.67
SHC1-211ENST00000490667 BRINP3Q76B58 766 aa19.23■□□□□ 0.67
SHC1-211ENST00000490667 DCAF11Q8TEB1 546 aa19.23■□□□□ 0.67
SHC1-211ENST00000490667 KDM2AQ9Y2K7 1162 aa19.23■□□□□ 0.67
SHC1-211ENST00000490667 PIK3C2GO75747 1445 aa19.23■□□□□ 0.67
SHC1-211ENST00000490667 ADGRL3Q9HAR2 1447 aa19.23■□□□□ 0.67
SHC1-211ENST00000490667 ROBO1Q9Y6N7 1651 aa19.22■□□□□ 0.67
SHC1-211ENST00000490667 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.22■□□□□ 0.67
SHC1-211ENST00000490667 LRPPRCP42704 1394 aaKnown RBP19.21■□□□□ 0.67
SHC1-211ENST00000490667 ABCC11Q96J66 1382 aa19.21■□□□□ 0.67
SHC1-211ENST00000490667 WAPLQ7Z5K2 1190 aa19.21■□□□□ 0.67
SHC1-211ENST00000490667 PRAG1Q86YV5 1406 aa19.21■□□□□ 0.67
SHC1-211ENST00000490667 STAC3Q96MF2 364 aa19.21■□□□□ 0.67
SHC1-211ENST00000490667 MST1RQ04912 1400 aa19.19■□□□□ 0.66
SHC1-211ENST00000490667 MYOM2P54296 1465 aa19.18■□□□□ 0.66
SHC1-211ENST00000490667 NRXN1Q9ULB1 1477 aa19.18■□□□□ 0.66
SHC1-211ENST00000490667 SETD1AO15047 1707 aaKnown RBP19.18■□□□□ 0.66
SHC1-211ENST00000490667 SIRT1Q96EB6 747 aa19.18■□□□□ 0.66
SHC1-211ENST00000490667 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
SHC1-211ENST00000490667 DHX57Q6P158 1386 aaKnown RBP19.18■□□□□ 0.66
SHC1-211ENST00000490667 YTHDC2Q9H6S0 1430 aaKnown RBP19.17■□□□□ 0.66
SHC1-211ENST00000490667 TECPR2O15040 1411 aa19.16■□□□□ 0.66
SHC1-211ENST00000490667 MED1Q15648 1581 aaPredicted RBP19.15■□□□□ 0.66
SHC1-211ENST00000490667 IFT172Q9UG01 1749 aa19.15■□□□□ 0.66
SHC1-211ENST00000490667 JCADQ9P266 1359 aa19.15■□□□□ 0.66
SHC1-211ENST00000490667 ORAI2Q96SN7 254 aa19.14■□□□□ 0.65
SHC1-211ENST00000490667 PLEKHH1Q9ULM0 1364 aa19.13■□□□□ 0.65
SHC1-211ENST00000490667 C1orf167Q5SNV9 1468 aa19.13■□□□□ 0.65
SHC1-211ENST00000490667 ASXL1Q8IXJ9 1541 aa19.12■□□□□ 0.65
SHC1-211ENST00000490667 DDX17Q92841 729 aaKnown RBP19.12■□□□□ 0.65
SHC1-211ENST00000490667 TRIM26Q12899 539 aaPredicted RBP19.11■□□□□ 0.65
SHC1-211ENST00000490667 LRRC59Q96AG4 307 aaKnown RBP19.1■□□□□ 0.65
SHC1-211ENST00000490667 PRAM1Q96QH2 718 aa19.1■□□□□ 0.65
SHC1-211ENST00000490667 PHLPP1O60346 1717 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms