RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 RIMS2Q9UQ26 1411 aa26.69■■□□□ 1.86
ABCF3-217ENST00000489719 SCAF1Q9H7N4 1312 aaKnown RBP26.68■■□□□ 1.86
ABCF3-217ENST00000489719 KCNA6P17658 529 aa26.67■■□□□ 1.86
ABCF3-217ENST00000489719 PIP4K2BP78356 416 aa26.67■■□□□ 1.86
ABCF3-217ENST00000489719 NUTM2DQ5VT03 806 aaPredicted RBP26.67■■□□□ 1.86
ABCF3-217ENST00000489719 ZNF326Q5BKZ1 582 aaKnown RBP26.65■■□□□ 1.86
ABCF3-217ENST00000489719 ZFYVE9O95405 1425 aa26.64■■□□□ 1.85
ABCF3-217ENST00000489719 PLEKHG1Q9ULL1 1385 aa26.63■■□□□ 1.85
ABCF3-217ENST00000489719 TMEM131LA2VDJ0 1609 aa26.61■■□□□ 1.85
ABCF3-217ENST00000489719 LRRC7Q96NW7 1537 aa26.61■■□□□ 1.85
ABCF3-217ENST00000489719 PROSER2Q86WR7 435 aaPredicted RBP26.61■■□□□ 1.85
ABCF3-217ENST00000489719 TBX22Q9Y458 520 aa26.61■■□□□ 1.85
ABCF3-217ENST00000489719 ACIN1Q9UKV3 1341 aaKnown RBP26.58■■□□□ 1.85
ABCF3-217ENST00000489719 MPHOSPH9Q99550 1183 aa26.54■■□□□ 1.84
ABCF3-217ENST00000489719 FOXD1Q16676 465 aa26.52■■□□□ 1.84
ABCF3-217ENST00000489719 STRCP1A6NGW2 1772 aa26.51■■□□□ 1.83
ABCF3-217ENST00000489719 TMEM94Q12767 1356 aa26.51■■□□□ 1.83
ABCF3-217ENST00000489719 RBM33Q96EV2 1170 aaKnown RBP26.51■■□□□ 1.83
ABCF3-217ENST00000489719 SETD5Q9C0A6 1442 aa26.5■■□□□ 1.83
ABCF3-217ENST00000489719 HSPA1LP34931 641 aa26.49■■□□□ 1.83
ABCF3-217ENST00000489719 SPHKAPQ2M3C7 1700 aa26.48■■□□□ 1.83
ABCF3-217ENST00000489719 MYO5BQ9ULV0 1848 aa26.48■■□□□ 1.83
ABCF3-217ENST00000489719 TRPM2O94759 1503 aa26.47■■□□□ 1.83
ABCF3-217ENST00000489719 VGFO15240 615 aaPredicted RBP26.45■■□□□ 1.82
ABCF3-217ENST00000489719 ADAMTS13Q76LX8 1427 aa26.45■■□□□ 1.82
ABCF3-217ENST00000489719 PIK3R4Q99570 1358 aa26.44■■□□□ 1.82
ABCF3-217ENST00000489719 RPGRIP1LQ68CZ1 1315 aa26.43■■□□□ 1.82
ABCF3-217ENST00000489719 AMOTL2Q9Y2J4 779 aa26.43■■□□□ 1.82
ABCF3-217ENST00000489719 C14orf37Q86TY3 774 aa26.42■■□□□ 1.82
ABCF3-217ENST00000489719 CLTCL1P53675 1640 aa26.41■■□□□ 1.82
ABCF3-217ENST00000489719 NKTRP30414 1462 aaKnown RBP26.41■■□□□ 1.82
ABCF3-217ENST00000489719 MSH6P52701 1360 aa26.39■■□□□ 1.82
ABCF3-217ENST00000489719 DISP3Q9P2K9 1392 aa26.38■■□□□ 1.81
ABCF3-217ENST00000489719 RAB3GAP2Q9H2M9 1393 aa26.37■■□□□ 1.81
ABCF3-217ENST00000489719 RGL3Q3MIN7 710 aa26.37■■□□□ 1.81
ABCF3-217ENST00000489719 CCDC144AA2RUR9 1427 aa26.37■■□□□ 1.81
ABCF3-217ENST00000489719 DIP2AQ14689 1571 aa26.35■■□□□ 1.81
ABCF3-217ENST00000489719 NWD1Q149M9 1564 aa26.35■■□□□ 1.81
ABCF3-217ENST00000489719 ALKQ9UM73 1620 aa26.35■■□□□ 1.81
ABCF3-217ENST00000489719 SLAIN2Q9P270 581 aa26.34■■□□□ 1.81
ABCF3-217ENST00000489719 NCOA3Q9Y6Q9 1424 aa26.33■■□□□ 1.81
ABCF3-217ENST00000489719 C19orf44Q9H6X5 657 aa26.33■■□□□ 1.81
ABCF3-217ENST00000489719 HRCP23327 699 aa26.32■■□□□ 1.8
ABCF3-217ENST00000489719 FAM135BQ49AJ0 1406 aa26.31■■□□□ 1.8
ABCF3-217ENST00000489719 ATF3P18847 181 aa26.31■■□□□ 1.8
ABCF3-217ENST00000489719 METP08581 1390 aa26.31■■□□□ 1.8
ABCF3-217ENST00000489719 PTPRUQ92729 1446 aa26.31■■□□□ 1.8
ABCF3-217ENST00000489719 CHD2O14647 1828 aaKnown RBP26.3■■□□□ 1.8
ABCF3-217ENST00000489719 KIF1BO60333 1816 aa26.3■■□□□ 1.8
ABCF3-217ENST00000489719 NEXMIFQ5QGS0 1516 aa26.3■■□□□ 1.8
ABCF3-217ENST00000489719 SETBP1Q9Y6X0 1596 aa26.29■■□□□ 1.8
ABCF3-217ENST00000489719 CADPS2Q86UW7 1296 aa26.29■■□□□ 1.8
ABCF3-217ENST00000489719 XIRP1Q702N8 1843 aaKnown RBP26.27■■□□□ 1.8
ABCF3-217ENST00000489719 ANKRD30BQ9BXX2 1392 aa26.22■■□□□ 1.79
ABCF3-217ENST00000489719 ADGRF5Q8IZF2 1346 aa26.21■■□□□ 1.79
ABCF3-217ENST00000489719 SPATA31E1Q6ZUB1 1445 aa26.21■■□□□ 1.79
ABCF3-217ENST00000489719 NRXN3Q9Y4C0 1643 aa26.21■■□□□ 1.79
ABCF3-217ENST00000489719 ILDR2Q71H61 639 aa26.12■■□□□ 1.77
ABCF3-217ENST00000489719 PHF23Q9BUL5 403 aaPredicted RBP26.12■■□□□ 1.77
ABCF3-217ENST00000489719 STK26Q9P289 416 aa26.11■■□□□ 1.77
ABCF3-217ENST00000489719 XRN1Q8IZH2 1706 aaKnown RBP26.09■■□□□ 1.77
ABCF3-217ENST00000489719 TMEM132EQ6IEE7 984 aa26.09■■□□□ 1.77
ABCF3-217ENST00000489719 ROBO1Q9Y6N7 1651 aa26.09■■□□□ 1.77
ABCF3-217ENST00000489719 ROBO2Q9HCK4 1378 aa26.08■■□□□ 1.77
ABCF3-217ENST00000489719 DCCP43146 1447 aa26.08■■□□□ 1.77
ABCF3-217ENST00000489719 PPLO60437 1756 aa26.07■■□□□ 1.76
ABCF3-217ENST00000489719 BRINP3Q76B58 766 aa26.07■■□□□ 1.76
ABCF3-217ENST00000489719 C14orf93Q9H972 538 aaKnown RBP26.07■■□□□ 1.76
ABCF3-217ENST00000489719 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.07■■□□□ 1.76
ABCF3-217ENST00000489719 PTCH1Q13635 1447 aa26.05■■□□□ 1.76
ABCF3-217ENST00000489719 ADGRL3Q9HAR2 1447 aa26.05■■□□□ 1.76
ABCF3-217ENST00000489719 KDM2AQ9Y2K7 1162 aa26.04■■□□□ 1.76
ABCF3-217ENST00000489719 CFAP70Q5T0N1 1121 aa26.03■■□□□ 1.76
ABCF3-217ENST00000489719 DCAF11Q8TEB1 546 aa26.03■■□□□ 1.76
ABCF3-217ENST00000489719 MED1Q15648 1581 aaPredicted RBP26.03■■□□□ 1.76
ABCF3-217ENST00000489719 STAC3Q96MF2 364 aa26.02■■□□□ 1.76
ABCF3-217ENST00000489719 LRPPRCP42704 1394 aaKnown RBP26.02■■□□□ 1.76
ABCF3-217ENST00000489719 PIK3C2GO75747 1445 aa26.02■■□□□ 1.76
ABCF3-217ENST00000489719 WAPLQ7Z5K2 1190 aa26.01■■□□□ 1.75
ABCF3-217ENST00000489719 ABCC11Q96J66 1382 aa26■■□□□ 1.75
ABCF3-217ENST00000489719 JCADQ9P266 1359 aa26■■□□□ 1.75
ABCF3-217ENST00000489719 MST1RQ04912 1400 aa25.99■■□□□ 1.75
ABCF3-217ENST00000489719 PRAG1Q86YV5 1406 aa25.98■■□□□ 1.75
ABCF3-217ENST00000489719 DHX57Q6P158 1386 aaKnown RBP25.98■■□□□ 1.75
ABCF3-217ENST00000489719 SIRT1Q96EB6 747 aa25.97■■□□□ 1.75
ABCF3-217ENST00000489719 SETD1AO15047 1707 aaKnown RBP25.96■■□□□ 1.75
ABCF3-217ENST00000489719 MYOM2P54296 1465 aa25.95■■□□□ 1.74
ABCF3-217ENST00000489719 YTHDC2Q9H6S0 1430 aaKnown RBP25.94■■□□□ 1.74
ABCF3-217ENST00000489719 LRRC59Q96AG4 307 aaKnown RBP25.93■■□□□ 1.74
ABCF3-217ENST00000489719 PHLPP1O60346 1717 aa25.93■■□□□ 1.74
ABCF3-217ENST00000489719 C1orf167Q5SNV9 1468 aa25.92■■□□□ 1.74
ABCF3-217ENST00000489719 NRXN1Q9ULB1 1477 aa25.92■■□□□ 1.74
ABCF3-217ENST00000489719 TECPR2O15040 1411 aa25.92■■□□□ 1.74
ABCF3-217ENST00000489719 SOCS7O14512 581 aa25.92■■□□□ 1.74
ABCF3-217ENST00000489719 ORAI2Q96SN7 254 aa25.92■■□□□ 1.74
ABCF3-217ENST00000489719 IFT172Q9UG01 1749 aa25.91■■□□□ 1.74
ABCF3-217ENST00000489719 DDX17Q92841 729 aaKnown RBP25.91■■□□□ 1.74
ABCF3-217ENST00000489719 SPATA31A6Q5VVP1 1343 aa25.9■■□□□ 1.74
ABCF3-217ENST00000489719 ESCO1Q5FWF5 840 aa25.9■■□□□ 1.74
ABCF3-217ENST00000489719 ASXL1Q8IXJ9 1541 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms