RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 MROH2AA6NES4 1674 aa25■■□□□ 1.59
POLR2J3-205ENST00000489144 CCDC7Q96M83 1385 aa25■■□□□ 1.59
POLR2J3-205ENST00000489144 ADGRF5Q8IZF2 1346 aa24.98■■□□□ 1.59
POLR2J3-205ENST00000489144 FANCIQ9NVI1 1328 aa24.96■■□□□ 1.59
POLR2J3-205ENST00000489144 KIF1BO60333 1816 aa24.94■■□□□ 1.58
POLR2J3-205ENST00000489144 ARHGEF40Q8TER5 1519 aa24.94■■□□□ 1.58
POLR2J3-205ENST00000489144 PLPPR3Q6T4P5 718 aa24.94■■□□□ 1.58
POLR2J3-205ENST00000489144 SYNMO15061 1565 aa24.93■■□□□ 1.58
POLR2J3-205ENST00000489144 IDI1Q13907 227 aa24.93■■□□□ 1.58
POLR2J3-205ENST00000489144 CFAP70Q5T0N1 1121 aa24.92■■□□□ 1.58
POLR2J3-205ENST00000489144 MADDQ8WXG6 1647 aa24.92■■□□□ 1.58
POLR2J3-205ENST00000489144 NOS1P29475 1434 aa24.9■■□□□ 1.58
POLR2J3-205ENST00000489144 CLTCQ00610 1675 aaKnown RBP24.9■■□□□ 1.58
POLR2J3-205ENST00000489144 CNTLNQ9NXG0 1405 aa24.89■■□□□ 1.58
POLR2J3-205ENST00000489144 ANP32CO43423 234 aa24.89■■□□□ 1.58
POLR2J3-205ENST00000489144 BCANQ96GW7 911 aa24.87■■□□□ 1.57
POLR2J3-205ENST00000489144 ADGRB3O60242 1522 aa24.86■■□□□ 1.57
POLR2J3-205ENST00000489144 ZC3H13Q5T200 1668 aaKnown RBP24.85■■□□□ 1.57
POLR2J3-205ENST00000489144 PKNOX2Q96KN3 472 aa24.85■■□□□ 1.57
POLR2J3-205ENST00000489144 ESF1Q9H501 851 aaKnown RBP24.83■■□□□ 1.57
POLR2J3-205ENST00000489144 PREX1Q8TCU6 1659 aa24.83■■□□□ 1.57
POLR2J3-205ENST00000489144 GPRASP1Q5JY77 1395 aa24.83■■□□□ 1.57
POLR2J3-205ENST00000489144 AGLP35573 1532 aa24.83■■□□□ 1.56
POLR2J3-205ENST00000489144 REREQ9P2R6 1566 aa24.82■■□□□ 1.56
POLR2J3-205ENST00000489144 ARHGAP31Q2M1Z3 1444 aa24.81■■□□□ 1.56
POLR2J3-205ENST00000489144 TMEM132EQ6IEE7 984 aa24.81■■□□□ 1.56
POLR2J3-205ENST00000489144 MYO5BQ9ULV0 1848 aa24.79■■□□□ 1.56
POLR2J3-205ENST00000489144 DISP3Q9P2K9 1392 aa24.78■■□□□ 1.56
POLR2J3-205ENST00000489144 STAG3Q9UJ98 1225 aa24.78■■□□□ 1.56
POLR2J3-205ENST00000489144 ERVK-7P63135 1459 aa24.78■■□□□ 1.56
POLR2J3-205ENST00000489144 IFT172Q9UG01 1749 aa24.78■■□□□ 1.56
POLR2J3-205ENST00000489144 PIK3C2BO00750 1634 aa24.77■■□□□ 1.56
POLR2J3-205ENST00000489144 CEBPAP49715 358 aaPredicted RBP24.77■■□□□ 1.56
POLR2J3-205ENST00000489144 TESK2Q96S53 571 aa24.77■■□□□ 1.56
POLR2J3-205ENST00000489144 POLR1AO95602 1720 aaPredicted RBP24.77■■□□□ 1.56
POLR2J3-205ENST00000489144 FKBP8Q14318 412 aa24.75■■□□□ 1.55
POLR2J3-205ENST00000489144 MYOM2P54296 1465 aa24.74■■□□□ 1.55
POLR2J3-205ENST00000489144 ZMYM3Q14202 1370 aa24.74■■□□□ 1.55
POLR2J3-205ENST00000489144 PPLO60437 1756 aa24.74■■□□□ 1.55
POLR2J3-205ENST00000489144 SLC52A1Q9NWF4 448 aa24.73■■□□□ 1.55
POLR2J3-205ENST00000489144 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.73■■□□□ 1.55
POLR2J3-205ENST00000489144 CCDC184Q52MB2 194 aa24.72■■□□□ 1.55
POLR2J3-205ENST00000489144 TRAK1Q9UPV9 953 aa24.72■■□□□ 1.55
POLR2J3-205ENST00000489144 NEURL4Q96JN8 1562 aa24.7■■□□□ 1.54
POLR2J3-205ENST00000489144 NEXMIFQ5QGS0 1516 aa24.69■■□□□ 1.54
POLR2J3-205ENST00000489144 LAMC1P11047 1609 aa24.69■■□□□ 1.54
POLR2J3-205ENST00000489144 SCAF11Q99590 1463 aaKnown RBP24.68■■□□□ 1.54
POLR2J3-205ENST00000489144 IQGAP1P46940 1657 aa24.68■■□□□ 1.54
POLR2J3-205ENST00000489144 PIK3C2GO75747 1445 aa24.68■■□□□ 1.54
POLR2J3-205ENST00000489144 TMEM131LA2VDJ0 1609 aa24.67■■□□□ 1.54
POLR2J3-205ENST00000489144 STAC3Q96MF2 364 aa24.67■■□□□ 1.54
POLR2J3-205ENST00000489144 PPP6R1Q9UPN7 881 aa24.66■■□□□ 1.54
POLR2J3-205ENST00000489144 NRXN1Q9ULB1 1477 aa24.66■■□□□ 1.54
POLR2J3-205ENST00000489144 PLEKHG5O94827 1062 aa24.66■■□□□ 1.54
POLR2J3-205ENST00000489144 PRKRIP1Q9H875 184 aaPredicted RBP24.65■■□□□ 1.54
POLR2J3-205ENST00000489144 STK26Q9P289 416 aa24.65■■□□□ 1.54
POLR2J3-205ENST00000489144 VGFO15240 615 aaPredicted RBP24.64■■□□□ 1.54
POLR2J3-205ENST00000489144 TMF1P82094 1093 aa24.64■■□□□ 1.54
POLR2J3-205ENST00000489144 SAFB2Q14151 953 aaKnown RBP eCLIP24.64■■□□□ 1.54
POLR2J3-205ENST00000489144 C14orf93Q9H972 538 aaKnown RBP24.64■■□□□ 1.53
POLR2J3-205ENST00000489144 RPGRIP1LQ68CZ1 1315 aa24.63■■□□□ 1.53
POLR2J3-205ENST00000489144 SPATA31D1Q6ZQQ2 1576 aa24.61■■□□□ 1.53
POLR2J3-205ENST00000489144 KIAA1210Q9ULL0 1709 aa24.59■■□□□ 1.53
POLR2J3-205ENST00000489144 CCER2I3L3R5 266 aa24.59■■□□□ 1.53
POLR2J3-205ENST00000489144 IL27Q8NEV9 243 aa24.57■■□□□ 1.52
POLR2J3-205ENST00000489144 A2ML1A8K2U0 1454 aa24.57■■□□□ 1.52
POLR2J3-205ENST00000489144 PANK3Q9H999 370 aa24.56■■□□□ 1.52
POLR2J3-205ENST00000489144 TNRQ92752 1358 aa24.56■■□□□ 1.52
POLR2J3-205ENST00000489144 ADGRB1O14514 1584 aa24.56■■□□□ 1.52
POLR2J3-205ENST00000489144 EIF3AQ14152 1382 aaKnown RBP24.55■■□□□ 1.52
POLR2J3-205ENST00000489144 PODXL2Q9NZ53 605 aa24.55■■□□□ 1.52
POLR2J3-205ENST00000489144 NEFLP07196 543 aa24.53■■□□□ 1.52
POLR2J3-205ENST00000489144 SENP3-EIF4A1A0A087X0R7 540 aa24.53■■□□□ 1.52
POLR2J3-205ENST00000489144 CC2D1BQ5T0F9 858 aaKnown RBP24.52■■□□□ 1.52
POLR2J3-205ENST00000489144 MRS2Q9HD23 443 aa24.52■■□□□ 1.52
POLR2J3-205ENST00000489144 CENPJQ9HC77 1338 aaPredicted RBP24.52■■□□□ 1.52
POLR2J3-205ENST00000489144 RIMS2Q9UQ26 1411 aa24.52■■□□□ 1.52
POLR2J3-205ENST00000489144 FAM9BQ8IZU0 186 aa24.51■■□□□ 1.51
POLR2J3-205ENST00000489144 ASXL1Q8IXJ9 1541 aa24.49■■□□□ 1.51
POLR2J3-205ENST00000489144 FER1L4A9Z1Z3 1794 aa24.48■■□□□ 1.51
POLR2J3-205ENST00000489144 RTN4Q9NQC3 1192 aaKnown RBP24.48■■□□□ 1.51
POLR2J3-205ENST00000489144 SETBP1Q9Y6X0 1596 aa24.47■■□□□ 1.51
POLR2J3-205ENST00000489144 PER1O15534 1290 aaPredicted RBP24.46■■□□□ 1.51
POLR2J3-205ENST00000489144 C3P01024 1663 aa24.45■■□□□ 1.51
POLR2J3-205ENST00000489144 QRICH2Q9H0J4 1663 aa24.43■■□□□ 1.5
POLR2J3-205ENST00000489144 ZFYVE9O95405 1425 aa24.43■■□□□ 1.5
POLR2J3-205ENST00000489144 TMC1Q8TDI8 760 aa24.43■■□□□ 1.5
POLR2J3-205ENST00000489144 ALKQ9UM73 1620 aa24.42■■□□□ 1.5
POLR2J3-205ENST00000489144 MINK1Q8N4C8 1332 aaPredicted RBP24.42■■□□□ 1.5
POLR2J3-205ENST00000489144 PRAM1Q96QH2 718 aa24.42■■□□□ 1.5
POLR2J3-205ENST00000489144 PTPRMP28827 1452 aa24.4■■□□□ 1.5
POLR2J3-205ENST00000489144 ARHGEF28Q8N1W1 1705 aaKnown RBP24.4■■□□□ 1.5
POLR2J3-205ENST00000489144 LTKP29376 864 aa24.4■■□□□ 1.5
POLR2J3-205ENST00000489144 WAPLQ7Z5K2 1190 aa24.4■■□□□ 1.5
POLR2J3-205ENST00000489144 CABP2Q9NPB3 220 aa24.4■■□□□ 1.5
POLR2J3-205ENST00000489144 HNRNPUQ00839 825 aaKnown RBP eCLIP24.39■■□□□ 1.5
POLR2J3-205ENST00000489144 YTHDC2Q9H6S0 1430 aaKnown RBP24.38■■□□□ 1.49
POLR2J3-205ENST00000489144 POGKQ9P215 609 aa24.38■■□□□ 1.49
POLR2J3-205ENST00000489144 MYOM1P52179 1685 aa24.38■■□□□ 1.49
POLR2J3-205ENST00000489144 UBR1Q8IWV7 1749 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms