RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 MYOM2P54296 1465 aa19.05■□□□□ 0.64
ABCB1-207ENST00000488737 KIF13AQ9H1H9 1805 aa19.05■□□□□ 0.64
ABCB1-207ENST00000488737 KIDINS220Q9ULH0 1771 aa19.05■□□□□ 0.64
ABCB1-207ENST00000488737 EFCAB6Q5THR3 1501 aa19.05■□□□□ 0.64
ABCB1-207ENST00000488737 LMTK2Q8IWU2 1503 aa19.04■□□□□ 0.64
ABCB1-207ENST00000488737 CFAP74Q9C0B2 1584 aa19.04■□□□□ 0.64
ABCB1-207ENST00000488737 IFT172Q9UG01 1749 aa19.03■□□□□ 0.64
ABCB1-207ENST00000488737 MAP3K4Q9Y6R4 1608 aa19.03■□□□□ 0.64
ABCB1-207ENST00000488737 EIF3AQ14152 1382 aaKnown RBP19.03■□□□□ 0.64
ABCB1-207ENST00000488737 DIP2BQ9P265 1576 aa19.02■□□□□ 0.64
ABCB1-207ENST00000488737 ZNF518AQ6AHZ1 1483 aa19.02■□□□□ 0.63
ABCB1-207ENST00000488737 MYOM1P52179 1685 aa19.01■□□□□ 0.63
ABCB1-207ENST00000488737 KIF3BO15066 747 aa19.01■□□□□ 0.63
ABCB1-207ENST00000488737 CC2D1BQ5T0F9 858 aaKnown RBP19■□□□□ 0.63
ABCB1-207ENST00000488737 KDM5AP29375 1690 aaKnown RBP19■□□□□ 0.63
ABCB1-207ENST00000488737 SLC24A1O60721 1099 aa18.99■□□□□ 0.63
ABCB1-207ENST00000488737 PPRC1Q5VV67 1664 aaKnown RBP18.99■□□□□ 0.63
ABCB1-207ENST00000488737 ABCA6Q8N139 1617 aa18.99■□□□□ 0.63
ABCB1-207ENST00000488737 NPC1L1Q9UHC9 1359 aa18.98■□□□□ 0.63
ABCB1-207ENST00000488737 RRP1P56182 461 aaKnown RBP18.97■□□□□ 0.63
ABCB1-207ENST00000488737 CCDC136Q96JN2 1154 aa18.97■□□□□ 0.63
ABCB1-207ENST00000488737 ASXL1Q8IXJ9 1541 aa18.97■□□□□ 0.63
ABCB1-207ENST00000488737 KNSTRNQ9Y448 316 aa18.96■□□□□ 0.63
ABCB1-207ENST00000488737 MYO3AQ8NEV4 1616 aa18.96■□□□□ 0.63
ABCB1-207ENST00000488737 NRXN1Q9ULB1 1477 aa18.96■□□□□ 0.63
ABCB1-207ENST00000488737 GLI2P10070 1586 aa18.95■□□□□ 0.62
ABCB1-207ENST00000488737 RCAN3Q9UKA8 241 aa18.95■□□□□ 0.62
ABCB1-207ENST00000488737 MROH2AA6NES4 1674 aa18.95■□□□□ 0.62
ABCB1-207ENST00000488737 MYT1LQ9UL68 1186 aa18.94■□□□□ 0.62
ABCB1-207ENST00000488737 CD109Q6YHK3 1445 aa18.93■□□□□ 0.62
ABCB1-207ENST00000488737 AMER1Q5JTC6 1135 aaPredicted RBP18.93■□□□□ 0.62
ABCB1-207ENST00000488737 UGGT1Q9NYU2 1555 aa18.93■□□□□ 0.62
ABCB1-207ENST00000488737 PIK3C2GO75747 1445 aa18.93■□□□□ 0.62
ABCB1-207ENST00000488737 ADGRB3O60242 1522 aa18.93■□□□□ 0.62
ABCB1-207ENST00000488737 FAM69CQ0P6D2 419 aa18.92■□□□□ 0.62
ABCB1-207ENST00000488737 MLH3Q9UHC1 1453 aa18.92■□□□□ 0.62
ABCB1-207ENST00000488737 SENP3-EIF4A1A0A087X0R7 540 aa18.92■□□□□ 0.62
ABCB1-207ENST00000488737 POGZQ7Z3K3 1410 aa18.92■□□□□ 0.62
ABCB1-207ENST00000488737 SETBP1Q9Y6X0 1596 aa18.91■□□□□ 0.62
ABCB1-207ENST00000488737 MSH5O43196 834 aa18.91■□□□□ 0.62
ABCB1-207ENST00000488737 HECW2Q9P2P5 1572 aa18.9■□□□□ 0.62
ABCB1-207ENST00000488737 SBNO2Q9Y2G9 1366 aa18.9■□□□□ 0.62
ABCB1-207ENST00000488737 PPP2R1AP30153 589 aa18.9■□□□□ 0.62
ABCB1-207ENST00000488737 FRMPD1Q5SYB0 1578 aa18.89■□□□□ 0.61
ABCB1-207ENST00000488737 ERVK-7P63135 1459 aa18.88■□□□□ 0.61
ABCB1-207ENST00000488737 PPLO60437 1756 aa18.88■□□□□ 0.61
ABCB1-207ENST00000488737 ADGRF5Q8IZF2 1346 aa18.86■□□□□ 0.61
ABCB1-207ENST00000488737 SALL2Q9Y467 1007 aaPredicted RBP18.86■□□□□ 0.61
ABCB1-207ENST00000488737 CFAP70Q5T0N1 1121 aa18.85■□□□□ 0.61
ABCB1-207ENST00000488737 WDR43Q15061 677 aaKnown RBP eCLIP18.84■□□□□ 0.61
ABCB1-207ENST00000488737 CDCA7LQ96GN5 454 aa18.84■□□□□ 0.61
ABCB1-207ENST00000488737 ADAMTS8Q9UP79 889 aa18.84■□□□□ 0.61
ABCB1-207ENST00000488737 ZC3H13Q5T200 1668 aaKnown RBP18.84■□□□□ 0.61
ABCB1-207ENST00000488737 NPATQ14207 1427 aa18.83■□□□□ 0.61
ABCB1-207ENST00000488737 EXOC6Q8TAG9 804 aa18.82■□□□□ 0.6
ABCB1-207ENST00000488737 NEO1Q92859 1461 aa18.82■□□□□ 0.6
ABCB1-207ENST00000488737 ABCC3O15438 1527 aa18.81■□□□□ 0.6
ABCB1-207ENST00000488737 NOS1P29475 1434 aa18.81■□□□□ 0.6
ABCB1-207ENST00000488737 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
ABCB1-207ENST00000488737 CAMSAP1Q5T5Y3 1602 aa18.8■□□□□ 0.6
ABCB1-207ENST00000488737 RPGRIP1LQ68CZ1 1315 aa18.8■□□□□ 0.6
ABCB1-207ENST00000488737 ZNF521Q96K83 1311 aa18.79■□□□□ 0.6
ABCB1-207ENST00000488737 QRICH2Q9H0J4 1663 aa18.78■□□□□ 0.6
ABCB1-207ENST00000488737 ERICH6Q7L0X2 663 aa18.78■□□□□ 0.6
ABCB1-207ENST00000488737 CFAP65Q6ZU64 1925 aaKnown RBP18.78■□□□□ 0.6
ABCB1-207ENST00000488737 PIK3C2BO00750 1634 aa18.78■□□□□ 0.6
ABCB1-207ENST00000488737 PLEKHH1Q9ULM0 1364 aa18.77■□□□□ 0.6
ABCB1-207ENST00000488737 ADGRB1O14514 1584 aa18.77■□□□□ 0.6
ABCB1-207ENST00000488737 CENPJQ9HC77 1338 aaPredicted RBP18.77■□□□□ 0.59
ABCB1-207ENST00000488737 RICTORQ6R327 1708 aa18.76■□□□□ 0.59
ABCB1-207ENST00000488737 USP32Q8NFA0 1604 aa18.75■□□□□ 0.59
ABCB1-207ENST00000488737 TCERG1O14776 1098 aaKnown RBP18.75■□□□□ 0.59
ABCB1-207ENST00000488737 C14orf93Q9H972 538 aaKnown RBP18.75■□□□□ 0.59
ABCB1-207ENST00000488737 NGEFQ8N5V2 710 aa18.74■□□□□ 0.59
ABCB1-207ENST00000488737 DIP2CQ9Y2E4 1556 aa18.74■□□□□ 0.59
ABCB1-207ENST00000488737 SIGLEC1Q9BZZ2 1709 aa18.74■□□□□ 0.59
ABCB1-207ENST00000488737 DUSP27Q5VZP5 1158 aa18.73■□□□□ 0.59
ABCB1-207ENST00000488737 GOLGA2Q08379 1002 aa18.73■□□□□ 0.59
ABCB1-207ENST00000488737 ARHGAP31Q2M1Z3 1444 aa18.72■□□□□ 0.59
ABCB1-207ENST00000488737 CARD14Q9BXL6 1004 aa18.71■□□□□ 0.59
ABCB1-207ENST00000488737 GGT6Q6P531 493 aa18.71■□□□□ 0.59
ABCB1-207ENST00000488737 POLR3AO14802 1390 aaPredicted RBP18.7■□□□□ 0.58
ABCB1-207ENST00000488737 MS4A1P11836 297 aa18.7■□□□□ 0.58
ABCB1-207ENST00000488737 CHGAP10645 457 aaKnown RBP18.69■□□□□ 0.58
ABCB1-207ENST00000488737 TRMT2AQ8IZ69 625 aaKnown RBP18.69■□□□□ 0.58
ABCB1-207ENST00000488737 NEXMIFQ5QGS0 1516 aa18.69■□□□□ 0.58
ABCB1-207ENST00000488737 ANP32AP39687 249 aaKnown RBP18.69■□□□□ 0.58
ABCB1-207ENST00000488737 PUS7Q96PZ0 661 aaKnown RBP18.69■□□□□ 0.58
ABCB1-207ENST00000488737 ARHGEF28Q8N1W1 1705 aaKnown RBP18.68■□□□□ 0.58
ABCB1-207ENST00000488737 SLFN5Q08AF3 891 aa18.68■□□□□ 0.58
ABCB1-207ENST00000488737 CRBNQ96SW2 442 aa18.68■□□□□ 0.58
ABCB1-207ENST00000488737 PLIN1O60240 522 aa18.67■□□□□ 0.58
ABCB1-207ENST00000488737 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.67■□□□□ 0.58
ABCB1-207ENST00000488737 NOP58Q9Y2X3 529 aaKnown RBP18.67■□□□□ 0.58
ABCB1-207ENST00000488737 RAPGEF3O95398 923 aa18.66■□□□□ 0.58
ABCB1-207ENST00000488737 SHPRHQ149N8 1683 aa18.65■□□□□ 0.58
ABCB1-207ENST00000488737 NSD3Q9BZ95 1437 aa18.65■□□□□ 0.58
ABCB1-207ENST00000488737 ZFYVE9O95405 1425 aa18.65■□□□□ 0.58
ABCB1-207ENST00000488737 TRAK1Q9UPV9 953 aa18.65■□□□□ 0.58
ABCB1-207ENST00000488737 NKTRP30414 1462 aaKnown RBP18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms