RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 TMEM2Q9UHN6 1383 aa10.23□□□□□ -0.77
CTDSPL-208ENST00000486978 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.22□□□□□ -0.77
CTDSPL-208ENST00000486978 MSH6P52701 1360 aa10.22□□□□□ -0.77
CTDSPL-208ENST00000486978 CCDC141Q6ZP82 1450 aa10.22□□□□□ -0.77
CTDSPL-208ENST00000486978 EHBP1L1Q8N3D4 1523 aa10.22□□□□□ -0.77
CTDSPL-208ENST00000486978 EID1Q9Y6B2 187 aa10.21□□□□□ -0.77
CTDSPL-208ENST00000486978 VPS8Q8N3P4 1428 aa10.21□□□□□ -0.78
CTDSPL-208ENST00000486978 NKTRP30414 1462 aaKnown RBP10.2□□□□□ -0.78
CTDSPL-208ENST00000486978 RBM6P78332 1123 aaKnown RBP10.2□□□□□ -0.78
CTDSPL-208ENST00000486978 CAMSAP2Q08AD1 1489 aa10.2□□□□□ -0.78
CTDSPL-208ENST00000486978 MYO5BQ9ULV0 1848 aa10.19□□□□□ -0.78
CTDSPL-208ENST00000486978 IDI1Q13907 227 aa10.18□□□□□ -0.78
CTDSPL-208ENST00000486978 C8orf37Q96NL8 207 aa10.18□□□□□ -0.78
CTDSPL-208ENST00000486978 EFCAB6Q5THR3 1501 aa10.17□□□□□ -0.78
CTDSPL-208ENST00000486978 EIF2AK4Q9P2K8 1649 aaKnown RBP10.16□□□□□ -0.78
CTDSPL-208ENST00000486978 BRINP3Q76B58 766 aa10.16□□□□□ -0.78
CTDSPL-208ENST00000486978 DDX17Q92841 729 aaKnown RBP10.16□□□□□ -0.78
CTDSPL-208ENST00000486978 ATAD2Q6PL18 1390 aa10.15□□□□□ -0.78
CTDSPL-208ENST00000486978 ARHGEF5Q12774 1597 aa10.15□□□□□ -0.78
CTDSPL-208ENST00000486978 ARHGAP31Q2M1Z3 1444 aa10.15□□□□□ -0.79
CTDSPL-208ENST00000486978 NHSL1Q5SYE7 1610 aa10.15□□□□□ -0.79
CTDSPL-208ENST00000486978 CNKSR2Q8WXI2 1034 aa10.14□□□□□ -0.79
CTDSPL-208ENST00000486978 LRP5O75197 1615 aa10.14□□□□□ -0.79
CTDSPL-208ENST00000486978 SETD5Q9C0A6 1442 aa10.13□□□□□ -0.79
CTDSPL-208ENST00000486978 STAG3Q9UJ98 1225 aa10.12□□□□□ -0.79
CTDSPL-208ENST00000486978 PNPLA6Q8IY17 1366 aa10.12□□□□□ -0.79
CTDSPL-208ENST00000486978 ADAMTS2O95450 1211 aa10.11□□□□□ -0.79
CTDSPL-208ENST00000486978 TSPY4P0CV99 314 aa10.11□□□□□ -0.79
CTDSPL-208ENST00000486978 TSPY10P0CW01 314 aa10.11□□□□□ -0.79
CTDSPL-208ENST00000486978 NCBP3Q53F19 620 aaKnown RBP10.11□□□□□ -0.79
CTDSPL-208ENST00000486978 DEFB132Q7Z7B7 95 aa10.11□□□□□ -0.79
CTDSPL-208ENST00000486978 BCANQ96GW7 911 aa10.11□□□□□ -0.79
CTDSPL-208ENST00000486978 ASXL1Q8IXJ9 1541 aa10.11□□□□□ -0.79
CTDSPL-208ENST00000486978 ZFYVE9O95405 1425 aa10.1□□□□□ -0.79
CTDSPL-208ENST00000486978 RSPH4AQ5TD94 716 aa10.1□□□□□ -0.79
CTDSPL-208ENST00000486978 NGLY1Q96IV0 654 aa10.1□□□□□ -0.79
CTDSPL-208ENST00000486978 C19orf44Q9H6X5 657 aa10.1□□□□□ -0.79
CTDSPL-208ENST00000486978 BRWD3Q6RI45 1802 aa10.1□□□□□ -0.79
CTDSPL-208ENST00000486978 ADGRB3O60242 1522 aa10.09□□□□□ -0.79
CTDSPL-208ENST00000486978 ATF3P18847 181 aa10.09□□□□□ -0.79
CTDSPL-208ENST00000486978 C14orf37Q86TY3 774 aa10.09□□□□□ -0.79
CTDSPL-208ENST00000486978 CADPS2Q86UW7 1296 aa10.09□□□□□ -0.79
CTDSPL-208ENST00000486978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.09□□□□□ -0.79
CTDSPL-208ENST00000486978 PTPRUQ92729 1446 aa10.08□□□□□ -0.8
CTDSPL-208ENST00000486978 NCOA3Q9Y6Q9 1424 aa10.08□□□□□ -0.8
CTDSPL-208ENST00000486978 KANK4Q5T7N3 995 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL-208ENST00000486978 USP21Q9UK80 565 aa10.08□□□□□ -0.8
CTDSPL-208ENST00000486978 ATRNO75882 1429 aa10.07□□□□□ -0.8
CTDSPL-208ENST00000486978 ADAMTS13Q76LX8 1427 aa10.07□□□□□ -0.8
CTDSPL-208ENST00000486978 PLEKHG1Q9ULL1 1385 aa10.07□□□□□ -0.8
CTDSPL-208ENST00000486978 PSDA5PKW4 1024 aaPredicted RBP10.07□□□□□ -0.8
CTDSPL-208ENST00000486978 APLP2Q06481 763 aa10.07□□□□□ -0.8
CTDSPL-208ENST00000486978 NOS1P29475 1434 aa10.07□□□□□ -0.8
CTDSPL-208ENST00000486978 MST1RQ04912 1400 aa10.07□□□□□ -0.8
CTDSPL-208ENST00000486978 GCC2Q8IWJ2 1684 aa10.06□□□□□ -0.8
CTDSPL-208ENST00000486978 LRRC59Q96AG4 307 aaKnown RBP10.06□□□□□ -0.8
CTDSPL-208ENST00000486978 TBX22Q9Y458 520 aa10.06□□□□□ -0.8
CTDSPL-208ENST00000486978 DUOX2Q9NRD8 1548 aa10.06□□□□□ -0.8
CTDSPL-208ENST00000486978 CCDC125Q86Z20 511 aa10.05□□□□□ -0.8
CTDSPL-208ENST00000486978 FNBP4Q8N3X1 1017 aaPredicted RBP10.05□□□□□ -0.8
CTDSPL-208ENST00000486978 TRPC5Q9UL62 973 aaPredicted RBP10.05□□□□□ -0.8
CTDSPL-208ENST00000486978 MYOM3Q5VTT5 1437 aa10.05□□□□□ -0.8
CTDSPL-208ENST00000486978 RIMS2Q9UQ26 1411 aa10.05□□□□□ -0.8
CTDSPL-208ENST00000486978 BCL9LQ86UU0 1499 aa10.04□□□□□ -0.8
CTDSPL-208ENST00000486978 HRCP23327 699 aa10.04□□□□□ -0.8
CTDSPL-208ENST00000486978 TMEM131LA2VDJ0 1609 aa10.04□□□□□ -0.8
CTDSPL-208ENST00000486978 RRP7BPQ9NSQ0 103 aa10.03□□□□□ -0.8
CTDSPL-208ENST00000486978 AMOTL2Q9Y2J4 779 aa10.03□□□□□ -0.8
CTDSPL-208ENST00000486978 LMTK2Q8IWU2 1503 aa10.02□□□□□ -0.81
CTDSPL-208ENST00000486978 GLI3P10071 1580 aa10.01□□□□□ -0.81
CTDSPL-208ENST00000486978 BLMP54132 1417 aaPredicted RBP10.01□□□□□ -0.81
CTDSPL-208ENST00000486978 UTRNP46939 3433 aa10.01□□□□□ -0.81
CTDSPL-208ENST00000486978 MARF1Q9Y4F3 1742 aaKnown RBP10.01□□□□□ -0.81
CTDSPL-208ENST00000486978 KIF15Q9NS87 1388 aa10.01□□□□□ -0.81
CTDSPL-208ENST00000486978 NALCNQ8IZF0 1738 aa10□□□□□ -0.81
CTDSPL-208ENST00000486978 XRN1Q8IZH2 1706 aaKnown RBP10□□□□□ -0.81
CTDSPL-208ENST00000486978 YY1P25490 414 aa10□□□□□ -0.81
CTDSPL-208ENST00000486978 TRPM2O94759 1503 aa10□□□□□ -0.81
CTDSPL-208ENST00000486978 LAMC1P11047 1609 aa10□□□□□ -0.81
CTDSPL-208ENST00000486978 PPP1R15AO75807 674 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL-208ENST00000486978 GJD4Q96KN9 370 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL-208ENST00000486978 PTPN23Q9H3S7 1636 aa9.99□□□□□ -0.81
CTDSPL-208ENST00000486978 DCCP43146 1447 aa9.99□□□□□ -0.81
CTDSPL-208ENST00000486978 CEP350Q5VT06 3117 aa9.98□□□□□ -0.81
CTDSPL-208ENST00000486978 COL22A1Q8NFW1 1626 aaPredicted RBP9.98□□□□□ -0.81
CTDSPL-208ENST00000486978 NRXN3Q9Y4C0 1643 aa9.98□□□□□ -0.81
CTDSPL-208ENST00000486978 IFFO2Q5TF58 517 aa9.98□□□□□ -0.81
CTDSPL-208ENST00000486978 ORAI2Q96SN7 254 aa9.98□□□□□ -0.81
CTDSPL-208ENST00000486978 SLC52A1Q9NWF4 448 aa9.98□□□□□ -0.81
CTDSPL-208ENST00000486978 CROCC2H7BZ55 1655 aa9.98□□□□□ -0.81
CTDSPL-208ENST00000486978 ERBINQ96RT1 1412 aa9.98□□□□□ -0.81
CTDSPL-208ENST00000486978 UNC13BO14795 1591 aa9.97□□□□□ -0.81
CTDSPL-208ENST00000486978 KCNA4P22459 653 aa9.97□□□□□ -0.81
CTDSPL-208ENST00000486978 SOS2Q07890 1332 aaPredicted RBP9.97□□□□□ -0.81
CTDSPL-208ENST00000486978 ABCC5O15440 1437 aa9.97□□□□□ -0.81
CTDSPL-208ENST00000486978 PTCH1Q13635 1447 aa9.97□□□□□ -0.81
CTDSPL-208ENST00000486978 RNF216Q9NWF9 866 aaPredicted RBP9.96□□□□□ -0.82
CTDSPL-208ENST00000486978 PIK3R4Q99570 1358 aa9.96□□□□□ -0.82
CTDSPL-208ENST00000486978 RALGAPBQ86X10 1494 aa9.96□□□□□ -0.82
CTDSPL-208ENST00000486978 DCAF8L1A6NGE4 600 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms