RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 ARHGAP23Q9P227 1491 aa20.85■□□□□ 0.93
POLR2J3-204ENST00000486319 SLIT1O75093 1534 aa20.84■□□□□ 0.93
POLR2J3-204ENST00000486319 SCAF11Q99590 1463 aaKnown RBP20.84■□□□□ 0.93
POLR2J3-204ENST00000486319 FBXO41Q8TF61 875 aa20.83■□□□□ 0.93
POLR2J3-204ENST00000486319 POLR1AO95602 1720 aaPredicted RBP20.83■□□□□ 0.93
POLR2J3-204ENST00000486319 DIEXFQ68CQ4 756 aaKnown RBP20.83■□□□□ 0.92
POLR2J3-204ENST00000486319 HDGFP51858 240 aaKnown RBP20.81■□□□□ 0.92
POLR2J3-204ENST00000486319 ADGRB3O60242 1522 aa20.81■□□□□ 0.92
POLR2J3-204ENST00000486319 KDM5AP29375 1690 aaKnown RBP20.8■□□□□ 0.92
POLR2J3-204ENST00000486319 LTBP4Q8N2S1 1624 aa20.79■□□□□ 0.92
POLR2J3-204ENST00000486319 L3MBTL2Q969R5 705 aa20.77■□□□□ 0.92
POLR2J3-204ENST00000486319 IQGAP1P46940 1657 aa20.76■□□□□ 0.91
POLR2J3-204ENST00000486319 BCANQ96GW7 911 aa20.76■□□□□ 0.91
POLR2J3-204ENST00000486319 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.75■□□□□ 0.91
POLR2J3-204ENST00000486319 TMEM131LA2VDJ0 1609 aa20.74■□□□□ 0.91
POLR2J3-204ENST00000486319 RIMS2Q9UQ26 1411 aa20.74■□□□□ 0.91
POLR2J3-204ENST00000486319 ZFYVE9O95405 1425 aa20.72■□□□□ 0.91
POLR2J3-204ENST00000486319 ZNF326Q5BKZ1 582 aaKnown RBP20.72■□□□□ 0.91
POLR2J3-204ENST00000486319 NUTM2DQ5VT03 806 aaPredicted RBP20.72■□□□□ 0.91
POLR2J3-204ENST00000486319 SLC26A8Q96RN1 970 aa20.72■□□□□ 0.91
POLR2J3-204ENST00000486319 SENP3Q9H4L4 574 aaPredicted RBP20.72■□□□□ 0.91
POLR2J3-204ENST00000486319 SPHKAPQ2M3C7 1700 aa20.71■□□□□ 0.91
POLR2J3-204ENST00000486319 TRPM2O94759 1503 aa20.7■□□□□ 0.9
POLR2J3-204ENST00000486319 CCDC144AA2RUR9 1427 aa20.69■□□□□ 0.9
POLR2J3-204ENST00000486319 CPS1P31327 1500 aa20.68■□□□□ 0.9
POLR2J3-204ENST00000486319 IQSEC2Q5JU85 1478 aa20.68■□□□□ 0.9
POLR2J3-204ENST00000486319 PLEKHG1Q9ULL1 1385 aa20.68■□□□□ 0.9
POLR2J3-204ENST00000486319 MYO5BQ9ULV0 1848 aa20.66■□□□□ 0.9
POLR2J3-204ENST00000486319 CLTCL1P53675 1640 aa20.64■□□□□ 0.9
POLR2J3-204ENST00000486319 UBAP1LF5GYI3 381 aa20.63■□□□□ 0.89
POLR2J3-204ENST00000486319 KCNA6P17658 529 aa20.63■□□□□ 0.89
POLR2J3-204ENST00000486319 TBX22Q9Y458 520 aa20.63■□□□□ 0.89
POLR2J3-204ENST00000486319 NBPF8Q3BBV2 869 aa20.59■□□□□ 0.89
POLR2J3-204ENST00000486319 RPGRIP1LQ68CZ1 1315 aa20.58■□□□□ 0.88
POLR2J3-204ENST00000486319 LRRC7Q96NW7 1537 aa20.58■□□□□ 0.88
POLR2J3-204ENST00000486319 VGFO15240 615 aaPredicted RBP20.58■□□□□ 0.88
POLR2J3-204ENST00000486319 TOM1O60784 492 aa20.58■□□□□ 0.88
POLR2J3-204ENST00000486319 ADAMTS13Q76LX8 1427 aa20.56■□□□□ 0.88
POLR2J3-204ENST00000486319 RGL3Q3MIN7 710 aa20.56■□□□□ 0.88
POLR2J3-204ENST00000486319 PROSER2Q86WR7 435 aaPredicted RBP20.56■□□□□ 0.88
POLR2J3-204ENST00000486319 STRCP1A6NGW2 1772 aa20.56■□□□□ 0.88
POLR2J3-204ENST00000486319 EIF4G2P78344 907 aaKnown RBP eCLIP20.55■□□□□ 0.88
POLR2J3-204ENST00000486319 KIF1BO60333 1816 aa20.55■□□□□ 0.88
POLR2J3-204ENST00000486319 NEXMIFQ5QGS0 1516 aa20.53■□□□□ 0.88
POLR2J3-204ENST00000486319 RALGAPBQ86X10 1494 aa20.52■□□□□ 0.88
POLR2J3-204ENST00000486319 DCAF11Q8TEB1 546 aa20.52■□□□□ 0.87
POLR2J3-204ENST00000486319 RBM33Q96EV2 1170 aaKnown RBP20.52■□□□□ 0.87
POLR2J3-204ENST00000486319 TMEM94Q12767 1356 aa20.51■□□□□ 0.87
POLR2J3-204ENST00000486319 PIK3R4Q99570 1358 aa20.51■□□□□ 0.87
POLR2J3-204ENST00000486319 HSPA5P11021 654 aaKnown RBP20.51■□□□□ 0.87
POLR2J3-204ENST00000486319 PIP4K2BP78356 416 aa20.51■□□□□ 0.87
POLR2J3-204ENST00000486319 SCAF1Q9H7N4 1312 aaKnown RBP20.51■□□□□ 0.87
POLR2J3-204ENST00000486319 DIP2AQ14689 1571 aa20.5■□□□□ 0.87
POLR2J3-204ENST00000486319 HIRIP3Q9BW71 556 aaPredicted RBP20.5■□□□□ 0.87
POLR2J3-204ENST00000486319 AMOTL2Q9Y2J4 779 aa20.49■□□□□ 0.87
POLR2J3-204ENST00000486319 SPATA31E1Q6ZUB1 1445 aa20.49■□□□□ 0.87
POLR2J3-204ENST00000486319 NKTRP30414 1462 aaKnown RBP20.48■□□□□ 0.87
POLR2J3-204ENST00000486319 SETBP1Q9Y6X0 1596 aa20.48■□□□□ 0.87
POLR2J3-204ENST00000486319 KDM2AQ9Y2K7 1162 aa20.48■□□□□ 0.87
POLR2J3-204ENST00000486319 TRPM1Q7Z4N2 1603 aa20.47■□□□□ 0.87
POLR2J3-204ENST00000486319 NWD1Q149M9 1564 aa20.47■□□□□ 0.87
POLR2J3-204ENST00000486319 PRAG1Q86YV5 1406 aa20.46■□□□□ 0.87
POLR2J3-204ENST00000486319 METP08581 1390 aa20.46■□□□□ 0.87
POLR2J3-204ENST00000486319 MIER1Q8N108 512 aa20.45■□□□□ 0.86
POLR2J3-204ENST00000486319 ADGRF5Q8IZF2 1346 aa20.44■□□□□ 0.86
POLR2J3-204ENST00000486319 STAC3Q96MF2 364 aa20.44■□□□□ 0.86
POLR2J3-204ENST00000486319 NRXN3Q9Y4C0 1643 aa20.44■□□□□ 0.86
POLR2J3-204ENST00000486319 PTPRUQ92729 1446 aa20.44■□□□□ 0.86
POLR2J3-204ENST00000486319 CHD2O14647 1828 aaKnown RBP20.43■□□□□ 0.86
POLR2J3-204ENST00000486319 C14orf37Q86TY3 774 aa20.43■□□□□ 0.86
POLR2J3-204ENST00000486319 LAMC1P11047 1609 aa20.42■□□□□ 0.86
POLR2J3-204ENST00000486319 MSH6P52701 1360 aa20.41■□□□□ 0.86
POLR2J3-204ENST00000486319 DDX10Q13206 875 aaKnown RBP20.41■□□□□ 0.86
POLR2J3-204ENST00000486319 NCOA3Q9Y6Q9 1424 aa20.4■□□□□ 0.86
POLR2J3-204ENST00000486319 USP47Q96K76 1375 aa20.4■□□□□ 0.86
POLR2J3-204ENST00000486319 PPLO60437 1756 aa20.39■□□□□ 0.85
POLR2J3-204ENST00000486319 CARD11Q9BXL7 1154 aa20.38■□□□□ 0.85
POLR2J3-204ENST00000486319 IFT172Q9UG01 1749 aa20.38■□□□□ 0.85
POLR2J3-204ENST00000486319 ALKQ9UM73 1620 aa20.38■□□□□ 0.85
POLR2J3-204ENST00000486319 C19orf44Q9H6X5 657 aa20.37■□□□□ 0.85
POLR2J3-204ENST00000486319 ROCK2O75116 1388 aaKnown RBP20.37■□□□□ 0.85
POLR2J3-204ENST00000486319 XIRP1Q702N8 1843 aaKnown RBP20.37■□□□□ 0.85
POLR2J3-204ENST00000486319 HSPA1LP34931 641 aa20.36■□□□□ 0.85
POLR2J3-204ENST00000486319 GPRASP1Q5JY77 1395 aa20.35■□□□□ 0.85
POLR2J3-204ENST00000486319 WASHC2AQ641Q2 1341 aa20.35■□□□□ 0.85
POLR2J3-204ENST00000486319 KIAA1210Q9ULL0 1709 aa20.34■□□□□ 0.85
POLR2J3-204ENST00000486319 ATF3P18847 181 aa20.34■□□□□ 0.85
POLR2J3-204ENST00000486319 SLAIN2Q9P270 581 aa20.34■□□□□ 0.85
POLR2J3-204ENST00000486319 CADPS2Q86UW7 1296 aa20.33■□□□□ 0.85
POLR2J3-204ENST00000486319 PIK3C2GO75747 1445 aa20.33■□□□□ 0.85
POLR2J3-204ENST00000486319 MYOM2P54296 1465 aa20.32■□□□□ 0.84
POLR2J3-204ENST00000486319 CCDC7Q96M83 1385 aa20.32■□□□□ 0.84
POLR2J3-204ENST00000486319 XRN1Q8IZH2 1706 aaKnown RBP20.31■□□□□ 0.84
POLR2J3-204ENST00000486319 TMEM132EQ6IEE7 984 aa20.31■□□□□ 0.84
POLR2J3-204ENST00000486319 C14orf93Q9H972 538 aaKnown RBP20.31■□□□□ 0.84
POLR2J3-204ENST00000486319 FAM135BQ49AJ0 1406 aa20.3■□□□□ 0.84
POLR2J3-204ENST00000486319 STK26Q9P289 416 aa20.3■□□□□ 0.84
POLR2J3-204ENST00000486319 CFAP70Q5T0N1 1121 aa20.29■□□□□ 0.84
POLR2J3-204ENST00000486319 ROBO2Q9HCK4 1378 aa20.29■□□□□ 0.84
POLR2J3-204ENST00000486319 PTCH1Q13635 1447 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms