RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 TSPY4P0CV99 314 aa15.77■□□□□ 0.12
PTPN7-213ENST00000486116 TSPY10P0CW01 314 aa15.77■□□□□ 0.12
PTPN7-213ENST00000486116 NUTM2BA6NNL0 878 aaPredicted RBP15.76■□□□□ 0.11
PTPN7-213ENST00000486116 NUTM2EB1AL46 878 aaPredicted RBP15.76■□□□□ 0.11
PTPN7-213ENST00000486116 NUTM2AQ8IVF1 878 aaPredicted RBP15.76■□□□□ 0.11
PTPN7-213ENST00000486116 DUOX2Q9NRD8 1548 aa15.75■□□□□ 0.11
PTPN7-213ENST00000486116 NHSL1Q5SYE7 1610 aa15.75■□□□□ 0.11
PTPN7-213ENST00000486116 NUTM2DQ5VT03 806 aaPredicted RBP15.74■□□□□ 0.11
PTPN7-213ENST00000486116 ZRANB1Q9UGI0 708 aa15.74■□□□□ 0.11
PTPN7-213ENST00000486116 STAG3Q9UJ98 1225 aa15.74■□□□□ 0.11
PTPN7-213ENST00000486116 RBM6P78332 1123 aaKnown RBP15.73■□□□□ 0.11
PTPN7-213ENST00000486116 NCOA3Q9Y6Q9 1424 aa15.72■□□□□ 0.11
PTPN7-213ENST00000486116 IDI1Q13907 227 aa15.72■□□□□ 0.11
PTPN7-213ENST00000486116 ATAD2Q6PL18 1390 aa15.72■□□□□ 0.11
PTPN7-213ENST00000486116 EP400Q96L91 3159 aa15.71■□□□□ 0.1
PTPN7-213ENST00000486116 QTRT2Q9H974 415 aaKnown RBP15.7■□□□□ 0.1
PTPN7-213ENST00000486116 GCC2Q8IWJ2 1684 aa15.7■□□□□ 0.1
PTPN7-213ENST00000486116 ASXL1Q8IXJ9 1541 aa15.69■□□□□ 0.1
PTPN7-213ENST00000486116 CROCC2H7BZ55 1655 aa15.69■□□□□ 0.1
PTPN7-213ENST00000486116 ZFYVE9O95405 1425 aa15.68■□□□□ 0.1
PTPN7-213ENST00000486116 SETD5Q9C0A6 1442 aa15.68■□□□□ 0.1
PTPN7-213ENST00000486116 LRP5O75197 1615 aa15.68■□□□□ 0.1
PTPN7-213ENST00000486116 BRINP3Q76B58 766 aa15.68■□□□□ 0.1
PTPN7-213ENST00000486116 LMTK2Q8IWU2 1503 aa15.68■□□□□ 0.1
PTPN7-213ENST00000486116 PLEKHG1Q9ULL1 1385 aa15.67■□□□□ 0.1
PTPN7-213ENST00000486116 CADPS2Q86UW7 1296 aa15.67■□□□□ 0.1
PTPN7-213ENST00000486116 BCANQ96GW7 911 aa15.67■□□□□ 0.1
PTPN7-213ENST00000486116 C8orf37Q96NL8 207 aa15.67■□□□□ 0.1
PTPN7-213ENST00000486116 NOS1P29475 1434 aa15.67■□□□□ 0.1
PTPN7-213ENST00000486116 ERBINQ96RT1 1412 aa15.66■□□□□ 0.1
PTPN7-213ENST00000486116 FOXD1Q16676 465 aa15.65■□□□□ 0.1
PTPN7-213ENST00000486116 C14orf37Q86TY3 774 aa15.65■□□□□ 0.1
PTPN7-213ENST00000486116 ATF3P18847 181 aa15.64■□□□□ 0.09
PTPN7-213ENST00000486116 C19orf44Q9H6X5 657 aa15.64■□□□□ 0.09
PTPN7-213ENST00000486116 TMEM131LA2VDJ0 1609 aa15.63■□□□□ 0.09
PTPN7-213ENST00000486116 PNPLA6Q8IY17 1366 aa15.62■□□□□ 0.09
PTPN7-213ENST00000486116 KIF15Q9NS87 1388 aa15.62■□□□□ 0.09
PTPN7-213ENST00000486116 NGLY1Q96IV0 654 aa15.62■□□□□ 0.09
PTPN7-213ENST00000486116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.09
PTPN7-213ENST00000486116 ADAMTS13Q76LX8 1427 aa15.61■□□□□ 0.09
PTPN7-213ENST00000486116 RIMS2Q9UQ26 1411 aa15.6■□□□□ 0.09
PTPN7-213ENST00000486116 TBX22Q9Y458 520 aa15.6■□□□□ 0.09
PTPN7-213ENST00000486116 DCCP43146 1447 aa15.6■□□□□ 0.09
PTPN7-213ENST00000486116 MST1RQ04912 1400 aa15.6■□□□□ 0.09
PTPN7-213ENST00000486116 KANK1Q14678 1352 aa15.59■□□□□ 0.09
PTPN7-213ENST00000486116 XRN1Q8IZH2 1706 aaKnown RBP15.57■□□□□ 0.08
PTPN7-213ENST00000486116 LRRC59Q96AG4 307 aaKnown RBP15.57■□□□□ 0.08
PTPN7-213ENST00000486116 PIK3R4Q99570 1358 aa15.56■□□□□ 0.08
PTPN7-213ENST00000486116 ATRNO75882 1429 aa15.56■□□□□ 0.08
PTPN7-213ENST00000486116 MYOM3Q5VTT5 1437 aa15.56■□□□□ 0.08
PTPN7-213ENST00000486116 PTPRUQ92729 1446 aa15.56■□□□□ 0.08
PTPN7-213ENST00000486116 TRPM2O94759 1503 aa15.56■□□□□ 0.08
PTPN7-213ENST00000486116 LAMC1P11047 1609 aa15.56■□□□□ 0.08
PTPN7-213ENST00000486116 MARF1Q9Y4F3 1742 aaKnown RBP15.55■□□□□ 0.08
PTPN7-213ENST00000486116 PPP1R15AO75807 674 aaPredicted RBP15.55■□□□□ 0.08
PTPN7-213ENST00000486116 ADAMTS2O95450 1211 aa15.55■□□□□ 0.08
PTPN7-213ENST00000486116 CCDC125Q86Z20 511 aa15.55■□□□□ 0.08
PTPN7-213ENST00000486116 DDX17Q92841 729 aaKnown RBP15.55■□□□□ 0.08
PTPN7-213ENST00000486116 SLC52A1Q9NWF4 448 aa15.55■□□□□ 0.08
PTPN7-213ENST00000486116 NALCNQ8IZF0 1738 aa15.54■□□□□ 0.08
PTPN7-213ENST00000486116 RRP7BPQ9NSQ0 103 aa15.54■□□□□ 0.08
PTPN7-213ENST00000486116 BRWD3Q6RI45 1802 aa15.54■□□□□ 0.08
PTPN7-213ENST00000486116 UNC13BO14795 1591 aa15.53■□□□□ 0.08
PTPN7-213ENST00000486116 USP21Q9UK80 565 aa15.53■□□□□ 0.08
PTPN7-213ENST00000486116 TRPC5Q9UL62 973 aaPredicted RBP15.53■□□□□ 0.08
PTPN7-213ENST00000486116 ABCC5O15440 1437 aa15.52■□□□□ 0.08
PTPN7-213ENST00000486116 COL22A1Q8NFW1 1626 aaPredicted RBP15.52■□□□□ 0.08
PTPN7-213ENST00000486116 NRXN3Q9Y4C0 1643 aa15.51■□□□□ 0.07
PTPN7-213ENST00000486116 RPRD2Q5VT52 1461 aaKnown RBP15.51■□□□□ 0.07
PTPN7-213ENST00000486116 AMOTL2Q9Y2J4 779 aa15.5■□□□□ 0.07
PTPN7-213ENST00000486116 PTCH1Q13635 1447 aa15.5■□□□□ 0.07
PTPN7-213ENST00000486116 FNBP4Q8N3X1 1017 aaPredicted RBP15.49■□□□□ 0.07
PTPN7-213ENST00000486116 BLMP54132 1417 aaPredicted RBP15.49■□□□□ 0.07
PTPN7-213ENST00000486116 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.48■□□□□ 0.07
PTPN7-213ENST00000486116 HDGFP51858 240 aaKnown RBP15.48■□□□□ 0.07
PTPN7-213ENST00000486116 SPHKAPQ2M3C7 1700 aa15.48■□□□□ 0.07
PTPN7-213ENST00000486116 PTPN23Q9H3S7 1636 aa15.47■□□□□ 0.07
PTPN7-213ENST00000486116 BCL9LQ86UU0 1499 aa15.46■□□□□ 0.07
PTPN7-213ENST00000486116 DAPK1P53355 1430 aa15.46■□□□□ 0.07
PTPN7-213ENST00000486116 DEFB132Q7Z7B7 95 aa15.46■□□□□ 0.07
PTPN7-213ENST00000486116 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.46■□□□□ 0.07
PTPN7-213ENST00000486116 GLI3P10071 1580 aa15.45■□□□□ 0.06
PTPN7-213ENST00000486116 ADGRL3Q9HAR2 1447 aa15.45■□□□□ 0.06
PTPN7-213ENST00000486116 E9PCH4 1651 aa15.44■□□□□ 0.06
PTPN7-213ENST00000486116 MYOM2P54296 1465 aa15.42■□□□□ 0.06
PTPN7-213ENST00000486116 C1orf167Q5SNV9 1468 aa15.42■□□□□ 0.06
PTPN7-213ENST00000486116 SOS2Q07890 1332 aaPredicted RBP15.41■□□□□ 0.06
PTPN7-213ENST00000486116 CHGAP10645 457 aaKnown RBP15.4■□□□□ 0.06
PTPN7-213ENST00000486116 KANK4Q5T7N3 995 aaPredicted RBP15.4■□□□□ 0.06
PTPN7-213ENST00000486116 IQGAP3Q86VI3 1631 aa15.39■□□□□ 0.05
PTPN7-213ENST00000486116 ANKRD30AQ9BXX3 1397 aa15.39■□□□□ 0.05
PTPN7-213ENST00000486116 PSDA5PKW4 1024 aaPredicted RBP15.39■□□□□ 0.05
PTPN7-213ENST00000486116 HRCP23327 699 aa15.39■□□□□ 0.05
PTPN7-213ENST00000486116 GJD4Q96KN9 370 aaPredicted RBP15.39■□□□□ 0.05
PTPN7-213ENST00000486116 RALGAPBQ86X10 1494 aa15.38■□□□□ 0.05
PTPN7-213ENST00000486116 METP08581 1390 aa15.36■□□□□ 0.05
PTPN7-213ENST00000486116 CHIC2Q9UKJ5 165 aa15.36■□□□□ 0.05
PTPN7-213ENST00000486116 ORAI2Q96SN7 254 aa15.35■□□□□ 0.05
PTPN7-213ENST00000486116 ADGRL2O95490 1459 aa15.34■□□□□ 0.05
PTPN7-213ENST00000486116 SF3B2Q13435 895 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms