RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 PPP1R15AO75807 674 aaPredicted RBP18.41■□□□□ 0.54
HMG20B-211ENST00000486028 RIMS2Q9UQ26 1411 aa18.4■□□□□ 0.54
HMG20B-211ENST00000486028 TRPM2O94759 1503 aa18.4■□□□□ 0.54
HMG20B-211ENST00000486028 BCANQ96GW7 911 aa18.4■□□□□ 0.54
HMG20B-211ENST00000486028 ZNF326Q5BKZ1 582 aaKnown RBP18.39■□□□□ 0.53
HMG20B-211ENST00000486028 IQGAP1P46940 1657 aa18.38■□□□□ 0.53
HMG20B-211ENST00000486028 ZFYVE9O95405 1425 aa18.38■□□□□ 0.53
HMG20B-211ENST00000486028 LTBP4Q8N2S1 1624 aa18.36■□□□□ 0.53
HMG20B-211ENST00000486028 NUTM2DQ5VT03 806 aaPredicted RBP18.35■□□□□ 0.53
HMG20B-211ENST00000486028 SLC26A8Q96RN1 970 aa18.35■□□□□ 0.53
HMG20B-211ENST00000486028 MYO5BQ9ULV0 1848 aa18.35■□□□□ 0.53
HMG20B-211ENST00000486028 CLTCL1P53675 1640 aa18.34■□□□□ 0.53
HMG20B-211ENST00000486028 PLEKHG1Q9ULL1 1385 aa18.34■□□□□ 0.53
HMG20B-211ENST00000486028 FBXO41Q8TF61 875 aa18.34■□□□□ 0.53
HMG20B-211ENST00000486028 CCDC144AA2RUR9 1427 aa18.33■□□□□ 0.53
HMG20B-211ENST00000486028 TRIM26Q12899 539 aaPredicted RBP18.33■□□□□ 0.52
HMG20B-211ENST00000486028 RPGRIP1LQ68CZ1 1315 aa18.3■□□□□ 0.52
HMG20B-211ENST00000486028 ILDR1Q86SU0 546 aaPredicted RBP18.3■□□□□ 0.52
HMG20B-211ENST00000486028 TBX22Q9Y458 520 aa18.3■□□□□ 0.52
HMG20B-211ENST00000486028 CPS1P31327 1500 aa18.29■□□□□ 0.52
HMG20B-211ENST00000486028 KIF1BO60333 1816 aa18.29■□□□□ 0.52
HMG20B-211ENST00000486028 VGFO15240 615 aaPredicted RBP18.28■□□□□ 0.52
HMG20B-211ENST00000486028 KCNA6P17658 529 aa18.28■□□□□ 0.52
HMG20B-211ENST00000486028 IQSEC2Q5JU85 1478 aa18.27■□□□□ 0.52
HMG20B-211ENST00000486028 RGL3Q3MIN7 710 aa18.26■□□□□ 0.51
HMG20B-211ENST00000486028 ANKRD30BQ9BXX2 1392 aa18.25■□□□□ 0.51
HMG20B-211ENST00000486028 NEXMIFQ5QGS0 1516 aa18.23■□□□□ 0.51
HMG20B-211ENST00000486028 SPATA31E1Q6ZUB1 1445 aa18.23■□□□□ 0.51
HMG20B-211ENST00000486028 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
HMG20B-211ENST00000486028 PIK3R4Q99570 1358 aa18.21■□□□□ 0.51
HMG20B-211ENST00000486028 UBAP1LF5GYI3 381 aa18.21■□□□□ 0.51
HMG20B-211ENST00000486028 PROSER2Q86WR7 435 aaPredicted RBP18.21■□□□□ 0.51
HMG20B-211ENST00000486028 LRRC7Q96NW7 1537 aa18.2■□□□□ 0.5
HMG20B-211ENST00000486028 DIP2AQ14689 1571 aa18.19■□□□□ 0.5
HMG20B-211ENST00000486028 STRCP1A6NGW2 1772 aa18.19■□□□□ 0.5
HMG20B-211ENST00000486028 SETBP1Q9Y6X0 1596 aa18.18■□□□□ 0.5
HMG20B-211ENST00000486028 TOM1O60784 492 aa18.18■□□□□ 0.5
HMG20B-211ENST00000486028 AMOTL2Q9Y2J4 779 aa18.16■□□□□ 0.5
HMG20B-211ENST00000486028 ADGRF5Q8IZF2 1346 aa18.15■□□□□ 0.5
HMG20B-211ENST00000486028 TMEM94Q12767 1356 aa18.15■□□□□ 0.5
HMG20B-211ENST00000486028 NKTRP30414 1462 aaKnown RBP18.14■□□□□ 0.5
HMG20B-211ENST00000486028 METP08581 1390 aa18.14■□□□□ 0.49
HMG20B-211ENST00000486028 NWD1Q149M9 1564 aa18.13■□□□□ 0.49
HMG20B-211ENST00000486028 PPLO60437 1756 aa18.13■□□□□ 0.49
HMG20B-211ENST00000486028 RBM33Q96EV2 1170 aaKnown RBP18.13■□□□□ 0.49
HMG20B-211ENST00000486028 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
HMG20B-211ENST00000486028 CHD2O14647 1828 aaKnown RBP18.12■□□□□ 0.49
HMG20B-211ENST00000486028 STAC3Q96MF2 364 aa18.11■□□□□ 0.49
HMG20B-211ENST00000486028 PTPRUQ92729 1446 aa18.11■□□□□ 0.49
HMG20B-211ENST00000486028 PIP4K2BP78356 416 aa18.1■□□□□ 0.49
HMG20B-211ENST00000486028 PPP4R3CPQ6ZMV5 832 aa18.1■□□□□ 0.49
HMG20B-211ENST00000486028 C14orf37Q86TY3 774 aa18.1■□□□□ 0.49
HMG20B-211ENST00000486028 ALKQ9UM73 1620 aa18.09■□□□□ 0.49
HMG20B-211ENST00000486028 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
HMG20B-211ENST00000486028 DCAF11Q8TEB1 546 aa18.09■□□□□ 0.49
HMG20B-211ENST00000486028 NCOA3Q9Y6Q9 1424 aa18.08■□□□□ 0.49
HMG20B-211ENST00000486028 KDM2AQ9Y2K7 1162 aa18.08■□□□□ 0.48
HMG20B-211ENST00000486028 MSH6P52701 1360 aa18.07■□□□□ 0.48
HMG20B-211ENST00000486028 C14orf93Q9H972 538 aaKnown RBP18.06■□□□□ 0.48
HMG20B-211ENST00000486028 MYOM2P54296 1465 aa18.06■□□□□ 0.48
HMG20B-211ENST00000486028 IFT172Q9UG01 1749 aa18.06■□□□□ 0.48
HMG20B-211ENST00000486028 PIK3C2GO75747 1445 aa18.06■□□□□ 0.48
HMG20B-211ENST00000486028 DHX57Q6P158 1386 aaKnown RBP18.05■□□□□ 0.48
HMG20B-211ENST00000486028 C19orf44Q9H6X5 657 aa18.05■□□□□ 0.48
HMG20B-211ENST00000486028 XIRP1Q702N8 1843 aaKnown RBP18.04■□□□□ 0.48
HMG20B-211ENST00000486028 NRXN1Q9ULB1 1477 aa18.03■□□□□ 0.48
HMG20B-211ENST00000486028 CFAP70Q5T0N1 1121 aa18.03■□□□□ 0.48
HMG20B-211ENST00000486028 TMEM132EQ6IEE7 984 aa18.03■□□□□ 0.48
HMG20B-211ENST00000486028 PCGF6Q9BYE7 350 aa18.03■□□□□ 0.48
HMG20B-211ENST00000486028 ATF3P18847 181 aa18.02■□□□□ 0.48
HMG20B-211ENST00000486028 XRN1Q8IZH2 1706 aaKnown RBP18.02■□□□□ 0.48
HMG20B-211ENST00000486028 SIN3AQ96ST3 1273 aa18.02■□□□□ 0.48
HMG20B-211ENST00000486028 STK26Q9P289 416 aa18.02■□□□□ 0.48
HMG20B-211ENST00000486028 NEUROD1Q13562 356 aa18.01■□□□□ 0.47
HMG20B-211ENST00000486028 CADPS2Q86UW7 1296 aa18.01■□□□□ 0.47
HMG20B-211ENST00000486028 SETD1AO15047 1707 aaKnown RBP18.01■□□□□ 0.47
HMG20B-211ENST00000486028 NCBP3Q53F19 620 aaKnown RBP18■□□□□ 0.47
HMG20B-211ENST00000486028 SLAIN2Q9P270 581 aa18■□□□□ 0.47
HMG20B-211ENST00000486028 LRPPRCP42704 1394 aaKnown RBP18■□□□□ 0.47
HMG20B-211ENST00000486028 ROBO2Q9HCK4 1378 aa17.99■□□□□ 0.47
HMG20B-211ENST00000486028 PTCH1Q13635 1447 aa17.98■□□□□ 0.47
HMG20B-211ENST00000486028 ABCC11Q96J66 1382 aa17.98■□□□□ 0.47
HMG20B-211ENST00000486028 PRAG1Q86YV5 1406 aa17.98■□□□□ 0.47
HMG20B-211ENST00000486028 HSPA1LP34931 641 aa17.96■□□□□ 0.47
HMG20B-211ENST00000486028 L3MBTL2Q969R5 705 aa17.96■□□□□ 0.47
HMG20B-211ENST00000486028 FAM135BQ49AJ0 1406 aa17.96■□□□□ 0.47
HMG20B-211ENST00000486028 YTHDC2Q9H6S0 1430 aaKnown RBP17.96■□□□□ 0.47
HMG20B-211ENST00000486028 SIRT1Q96EB6 747 aa17.95■□□□□ 0.46
HMG20B-211ENST00000486028 WAPLQ7Z5K2 1190 aa17.94■□□□□ 0.46
HMG20B-211ENST00000486028 TECPR2O15040 1411 aa17.94■□□□□ 0.46
HMG20B-211ENST00000486028 DCCP43146 1447 aa17.94■□□□□ 0.46
HMG20B-211ENST00000486028 ADGRL3Q9HAR2 1447 aa17.94■□□□□ 0.46
HMG20B-211ENST00000486028 LAMC1P11047 1609 aa17.94■□□□□ 0.46
HMG20B-211ENST00000486028 ASXL1Q8IXJ9 1541 aa17.93■□□□□ 0.46
HMG20B-211ENST00000486028 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.92■□□□□ 0.46
HMG20B-211ENST00000486028 POGKQ9P215 609 aa17.89■□□□□ 0.45
HMG20B-211ENST00000486028 TRAK1Q9UPV9 953 aa17.89■□□□□ 0.45
HMG20B-211ENST00000486028 PRAM1Q96QH2 718 aa17.88■□□□□ 0.45
HMG20B-211ENST00000486028 ADGRB1O14514 1584 aa17.87■□□□□ 0.45
HMG20B-211ENST00000486028 PLEKHH1Q9ULM0 1364 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms