RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 ZFYVE9O95405 1425 aa34.55■■■■□ 3.12
ABCF3-216ENST00000485921 POLR1AO95602 1720 aaPredicted RBP34.55■■■■□ 3.12
ABCF3-216ENST00000485921 NEURL4Q96JN8 1562 aa34.53■■■■□ 3.12
ABCF3-216ENST00000485921 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.53■■■■□ 3.12
ABCF3-216ENST00000485921 SPATA31E1Q6ZUB1 1445 aa34.52■■■■□ 3.12
ABCF3-216ENST00000485921 RGL3Q3MIN7 710 aa34.51■■■■□ 3.12
ABCF3-216ENST00000485921 NUTM2DQ5VT03 806 aaPredicted RBP34.51■■■■□ 3.12
ABCF3-216ENST00000485921 MED14O60244 1454 aa34.51■■■■□ 3.11
ABCF3-216ENST00000485921 NPHP4O75161 1426 aaPredicted RBP34.5■■■■□ 3.11
ABCF3-216ENST00000485921 PPP1R15AO75807 674 aaPredicted RBP34.5■■■■□ 3.11
ABCF3-216ENST00000485921 RPGRIP1LQ68CZ1 1315 aa34.48■■■■□ 3.11
ABCF3-216ENST00000485921 NEXMIFQ5QGS0 1516 aa34.44■■■■□ 3.1
ABCF3-216ENST00000485921 IQGAP1P46940 1657 aa34.42■■■■□ 3.1
ABCF3-216ENST00000485921 PLEKHG1Q9ULL1 1385 aa34.41■■■■□ 3.1
ABCF3-216ENST00000485921 BCANQ96GW7 911 aa34.41■■■■□ 3.1
ABCF3-216ENST00000485921 SENP3Q9H4L4 574 aaPredicted RBP34.4■■■■□ 3.1
ABCF3-216ENST00000485921 SIN3AQ96ST3 1273 aa34.39■■■■□ 3.1
ABCF3-216ENST00000485921 VGFO15240 615 aaPredicted RBP34.38■■■■□ 3.09
ABCF3-216ENST00000485921 PPLO60437 1756 aa34.34■■■■□ 3.09
ABCF3-216ENST00000485921 NEUROD1Q13562 356 aa34.34■■■■□ 3.09
ABCF3-216ENST00000485921 SLC26A8Q96RN1 970 aa34.33■■■■□ 3.09
ABCF3-216ENST00000485921 ADGRF5Q8IZF2 1346 aa34.28■■■■□ 3.08
ABCF3-216ENST00000485921 IFT172Q9UG01 1749 aa34.27■■■■□ 3.08
ABCF3-216ENST00000485921 DCAF11Q8TEB1 546 aa34.26■■■■□ 3.08
ABCF3-216ENST00000485921 ADAMTS13Q76LX8 1427 aa34.26■■■■□ 3.07
ABCF3-216ENST00000485921 TBX22Q9Y458 520 aa34.25■■■■□ 3.07
ABCF3-216ENST00000485921 ZNF335Q9H4Z2 1342 aaPredicted RBP34.25■■■■□ 3.07
ABCF3-216ENST00000485921 SETBP1Q9Y6X0 1596 aa34.24■■■■□ 3.07
ABCF3-216ENST00000485921 CCER1Q8TC90 406 aaPredicted RBP34.23■■■■□ 3.07
ABCF3-216ENST00000485921 KDM2AQ9Y2K7 1162 aa34.23■■■■□ 3.07
ABCF3-216ENST00000485921 MYOM2P54296 1465 aa34.2■■■■□ 3.07
ABCF3-216ENST00000485921 NRXN3Q9Y4C0 1643 aa34.2■■■■□ 3.07
ABCF3-216ENST00000485921 STAC3Q96MF2 364 aa34.2■■■■□ 3.07
ABCF3-216ENST00000485921 CLSPNQ9HAW4 1339 aa34.19■■■■□ 3.06
ABCF3-216ENST00000485921 DIP2AQ14689 1571 aa34.19■■■■□ 3.06
ABCF3-216ENST00000485921 L3MBTL2Q969R5 705 aa34.17■■■■□ 3.06
ABCF3-216ENST00000485921 NRXN1Q9ULB1 1477 aa34.15■■■■□ 3.06
ABCF3-216ENST00000485921 PIK3C2GO75747 1445 aa34.14■■■■□ 3.06
ABCF3-216ENST00000485921 LTBP4Q8N2S1 1624 aa34.12■■■■□ 3.05
ABCF3-216ENST00000485921 ALKQ9UM73 1620 aa34.12■■■■□ 3.05
ABCF3-216ENST00000485921 KCNA6P17658 529 aa34.12■■■■□ 3.05
ABCF3-216ENST00000485921 PIK3R4Q99570 1358 aa34.11■■■■□ 3.05
ABCF3-216ENST00000485921 METP08581 1390 aa34.1■■■■□ 3.05
ABCF3-216ENST00000485921 TONSLQ96HA7 1378 aa34.09■■■■□ 3.05
ABCF3-216ENST00000485921 C14orf93Q9H972 538 aaKnown RBP34.07■■■■□ 3.04
ABCF3-216ENST00000485921 STRCP1A6NGW2 1772 aa34.06■■■■□ 3.04
ABCF3-216ENST00000485921 CFAP70Q5T0N1 1121 aa34.05■■■■□ 3.04
ABCF3-216ENST00000485921 CPS1P31327 1500 aa34.04■■■■□ 3.04
ABCF3-216ENST00000485921 SETD1AO15047 1707 aaKnown RBP34.04■■■■□ 3.04
ABCF3-216ENST00000485921 PTPRUQ92729 1446 aa34.04■■■■□ 3.04
ABCF3-216ENST00000485921 CHD2O14647 1828 aaKnown RBP34.03■■■■□ 3.04
ABCF3-216ENST00000485921 AMOTL2Q9Y2J4 779 aa34.03■■■■□ 3.04
ABCF3-216ENST00000485921 NWD1Q149M9 1564 aa34.02■■■■□ 3.04
ABCF3-216ENST00000485921 CERKQ8TCT0 537 aa34■■■■□ 3.03
ABCF3-216ENST00000485921 PRAG1Q86YV5 1406 aa33.99■■■■□ 3.03
ABCF3-216ENST00000485921 TMEM132EQ6IEE7 984 aa33.98■■■■□ 3.03
ABCF3-216ENST00000485921 LAMC1P11047 1609 aa33.97■■■■□ 3.03
ABCF3-216ENST00000485921 NKTRP30414 1462 aaKnown RBP33.95■■■■□ 3.03
ABCF3-216ENST00000485921 PROSER2Q86WR7 435 aaPredicted RBP33.95■■■■□ 3.03
ABCF3-216ENST00000485921 LRRC7Q96NW7 1537 aa33.94■■■■□ 3.02
ABCF3-216ENST00000485921 ASXL1Q8IXJ9 1541 aa33.93■■■■□ 3.02
ABCF3-216ENST00000485921 XRN1Q8IZH2 1706 aaKnown RBP33.92■■■■□ 3.02
ABCF3-216ENST00000485921 TIMELESSQ9UNS1 1208 aa33.91■■■■□ 3.02
ABCF3-216ENST00000485921 STK26Q9P289 416 aa33.9■■■■□ 3.02
ABCF3-216ENST00000485921 LRPPRCP42704 1394 aaKnown RBP33.89■■■■□ 3.02
ABCF3-216ENST00000485921 RBM33Q96EV2 1170 aaKnown RBP33.89■■■■□ 3.02
ABCF3-216ENST00000485921 TMEM94Q12767 1356 aa33.88■■■■□ 3.01
ABCF3-216ENST00000485921 YTHDC2Q9H6S0 1430 aaKnown RBP33.87■■■■□ 3.01
ABCF3-216ENST00000485921 NBPF8Q3BBV2 869 aa33.87■■■■□ 3.01
ABCF3-216ENST00000485921 ABCC11Q96J66 1382 aa33.85■■■■□ 3.01
ABCF3-216ENST00000485921 ADGRB1O14514 1584 aa33.85■■■■□ 3.01
ABCF3-216ENST00000485921 KIAA1210Q9ULL0 1709 aa33.85■■■■□ 3.01
ABCF3-216ENST00000485921 IQSEC2Q5JU85 1478 aa33.84■■■■□ 3.01
ABCF3-216ENST00000485921 NBPF1Q3BBV0 1214 aa33.84■■■■□ 3.01
ABCF3-216ENST00000485921 ROBO2Q9HCK4 1378 aa33.83■■■■□ 3.01
ABCF3-216ENST00000485921 PTCH1Q13635 1447 aa33.82■■■■□ 3
ABCF3-216ENST00000485921 TECPR2O15040 1411 aa33.81■■■■□ 3
ABCF3-216ENST00000485921 XIRP1Q702N8 1843 aaKnown RBP33.79■■■■□ 3
ABCF3-216ENST00000485921 NCOA3Q9Y6Q9 1424 aa33.78■■■■□ 3
ABCF3-216ENST00000485921 C14orf37Q86TY3 774 aa33.77■■■■□ 3
ABCF3-216ENST00000485921 TRAK1Q9UPV9 953 aa33.77■■■■□ 3
ABCF3-216ENST00000485921 TRPM1Q7Z4N2 1603 aa33.76■■■■□ 3
ABCF3-216ENST00000485921 KNDC1Q76NI1 1749 aa33.76■■■□□ 2.99
ABCF3-216ENST00000485921 SIRT1Q96EB6 747 aa33.75■■■□□ 2.99
ABCF3-216ENST00000485921 WAPLQ7Z5K2 1190 aa33.74■■■□□ 2.99
ABCF3-216ENST00000485921 ROCK2O75116 1388 aaKnown RBP33.73■■■□□ 2.99
ABCF3-216ENST00000485921 FAM135BQ49AJ0 1406 aa33.71■■■□□ 2.99
ABCF3-216ENST00000485921 MSH6P52701 1360 aa33.71■■■□□ 2.99
ABCF3-216ENST00000485921 DLC1Q96QB1 1528 aa33.7■■■□□ 2.99
ABCF3-216ENST00000485921 PLEKHH1Q9ULM0 1364 aa33.7■■■□□ 2.98
ABCF3-216ENST00000485921 PRAM1Q96QH2 718 aa33.69■■■□□ 2.98
ABCF3-216ENST00000485921 C19orf44Q9H6X5 657 aa33.69■■■□□ 2.98
ABCF3-216ENST00000485921 RALGAPBQ86X10 1494 aa33.68■■■□□ 2.98
ABCF3-216ENST00000485921 POGKQ9P215 609 aa33.67■■■□□ 2.98
ABCF3-216ENST00000485921 UBAP1LF5GYI3 381 aa33.66■■■□□ 2.98
ABCF3-216ENST00000485921 ADGRL3Q9HAR2 1447 aa33.65■■■□□ 2.98
ABCF3-216ENST00000485921 GPRASP1Q5JY77 1395 aa33.65■■■□□ 2.98
ABCF3-216ENST00000485921 TOM1O60784 492 aa33.64■■■□□ 2.98
ABCF3-216ENST00000485921 SAFB2Q14151 953 aaKnown RBP eCLIP33.63■■■□□ 2.97
ABCF3-216ENST00000485921 CARD11Q9BXL7 1154 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms