RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 SLIT1O75093 1534 aa18.48■□□□□ 0.55
HDAC7-223ENST00000485796 ANKLE2Q86XL3 938 aa18.46■□□□□ 0.55
HDAC7-223ENST00000485796 KDM5AP29375 1690 aaKnown RBP18.46■□□□□ 0.55
HDAC7-223ENST00000485796 NEXMIFQ5QGS0 1516 aa18.44■□□□□ 0.54
HDAC7-223ENST00000485796 STRCQ7RTU9 1775 aa18.44■□□□□ 0.54
HDAC7-223ENST00000485796 ADGRF5Q8IZF2 1346 aa18.43■□□□□ 0.54
HDAC7-223ENST00000485796 SCAF11Q99590 1463 aaKnown RBP18.42■□□□□ 0.54
HDAC7-223ENST00000485796 L3MBTL2Q969R5 705 aa18.42■□□□□ 0.54
HDAC7-223ENST00000485796 KDM2AQ9Y2K7 1162 aa18.42■□□□□ 0.54
HDAC7-223ENST00000485796 EID1Q9Y6B2 187 aa18.42■□□□□ 0.54
HDAC7-223ENST00000485796 RPGRIP1LQ68CZ1 1315 aa18.42■□□□□ 0.54
HDAC7-223ENST00000485796 NEURL4Q96JN8 1562 aa18.42■□□□□ 0.54
HDAC7-223ENST00000485796 DCAF11Q8TEB1 546 aa18.41■□□□□ 0.54
HDAC7-223ENST00000485796 PPP1R15AO75807 674 aaPredicted RBP18.4■□□□□ 0.54
HDAC7-223ENST00000485796 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.39■□□□□ 0.53
HDAC7-223ENST00000485796 CLSPNQ9HAW4 1339 aa18.39■□□□□ 0.53
HDAC7-223ENST00000485796 NPHP4O75161 1426 aaPredicted RBP18.39■□□□□ 0.53
HDAC7-223ENST00000485796 SLC26A8Q96RN1 970 aa18.37■□□□□ 0.53
HDAC7-223ENST00000485796 MED14O60244 1454 aa18.37■□□□□ 0.53
HDAC7-223ENST00000485796 PPLO60437 1756 aa18.37■□□□□ 0.53
HDAC7-223ENST00000485796 VGFO15240 615 aaPredicted RBP18.36■□□□□ 0.53
HDAC7-223ENST00000485796 HDGFP51858 240 aaKnown RBP18.36■□□□□ 0.53
HDAC7-223ENST00000485796 BCANQ96GW7 911 aa18.36■□□□□ 0.53
HDAC7-223ENST00000485796 PLEKHG1Q9ULL1 1385 aa18.36■□□□□ 0.53
HDAC7-223ENST00000485796 IFT172Q9UG01 1749 aa18.35■□□□□ 0.53
HDAC7-223ENST00000485796 POLR1AO95602 1720 aaPredicted RBP18.35■□□□□ 0.53
HDAC7-223ENST00000485796 ADAMTS13Q76LX8 1427 aa18.34■□□□□ 0.53
HDAC7-223ENST00000485796 TONSLQ96HA7 1378 aa18.32■□□□□ 0.52
HDAC7-223ENST00000485796 NRXN3Q9Y4C0 1643 aa18.31■□□□□ 0.52
HDAC7-223ENST00000485796 NBPF8Q3BBV2 869 aa18.31■□□□□ 0.52
HDAC7-223ENST00000485796 CFAP70Q5T0N1 1121 aa18.31■□□□□ 0.52
HDAC7-223ENST00000485796 MYOM2P54296 1465 aa18.31■□□□□ 0.52
HDAC7-223ENST00000485796 NRXN1Q9ULB1 1477 aa18.31■□□□□ 0.52
HDAC7-223ENST00000485796 IQGAP1P46940 1657 aa18.3■□□□□ 0.52
HDAC7-223ENST00000485796 PIK3C2GO75747 1445 aa18.3■□□□□ 0.52
HDAC7-223ENST00000485796 TBX22Q9Y458 520 aa18.28■□□□□ 0.52
HDAC7-223ENST00000485796 DMRT2Q9Y5R5 561 aa18.28■□□□□ 0.52
HDAC7-223ENST00000485796 SETBP1Q9Y6X0 1596 aa18.28■□□□□ 0.52
HDAC7-223ENST00000485796 METP08581 1390 aa18.28■□□□□ 0.52
HDAC7-223ENST00000485796 PRAG1Q86YV5 1406 aa18.27■□□□□ 0.52
HDAC7-223ENST00000485796 TMEM132EQ6IEE7 984 aa18.27■□□□□ 0.52
HDAC7-223ENST00000485796 C14orf93Q9H972 538 aaKnown RBP18.27■□□□□ 0.52
HDAC7-223ENST00000485796 ZNF335Q9H4Z2 1342 aaPredicted RBP18.26■□□□□ 0.51
HDAC7-223ENST00000485796 ALKQ9UM73 1620 aa18.26■□□□□ 0.51
HDAC7-223ENST00000485796 NBPF1Q3BBV0 1214 aa18.25■□□□□ 0.51
HDAC7-223ENST00000485796 PTPRUQ92729 1446 aa18.24■□□□□ 0.51
HDAC7-223ENST00000485796 STAC3Q96MF2 364 aa18.24■□□□□ 0.51
HDAC7-223ENST00000485796 ASXL1Q8IXJ9 1541 aa18.23■□□□□ 0.51
HDAC7-223ENST00000485796 SETD1AO15047 1707 aaKnown RBP18.22■□□□□ 0.51
HDAC7-223ENST00000485796 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
HDAC7-223ENST00000485796 AMOTL2Q9Y2J4 779 aa18.2■□□□□ 0.5
HDAC7-223ENST00000485796 KCNA6P17658 529 aa18.19■□□□□ 0.5
HDAC7-223ENST00000485796 RBM33Q96EV2 1170 aaKnown RBP18.19■□□□□ 0.5
HDAC7-223ENST00000485796 STK26Q9P289 416 aa18.19■□□□□ 0.5
HDAC7-223ENST00000485796 STRCP1A6NGW2 1772 aa18.19■□□□□ 0.5
HDAC7-223ENST00000485796 DIP2AQ14689 1571 aa18.18■□□□□ 0.5
HDAC7-223ENST00000485796 ADGRB1O14514 1584 aa18.17■□□□□ 0.5
HDAC7-223ENST00000485796 PIK3R4Q99570 1358 aa18.16■□□□□ 0.5
HDAC7-223ENST00000485796 LTBP4Q8N2S1 1624 aa18.15■□□□□ 0.5
HDAC7-223ENST00000485796 YTHDC2Q9H6S0 1430 aaKnown RBP18.15■□□□□ 0.5
HDAC7-223ENST00000485796 CHD2O14647 1828 aaKnown RBP18.14■□□□□ 0.5
HDAC7-223ENST00000485796 LRPPRCP42704 1394 aaKnown RBP18.14■□□□□ 0.49
HDAC7-223ENST00000485796 ROBO2Q9HCK4 1378 aa18.14■□□□□ 0.49
HDAC7-223ENST00000485796 TRPM1Q7Z4N2 1603 aa18.13■□□□□ 0.49
HDAC7-223ENST00000485796 TRAK1Q9UPV9 953 aa18.13■□□□□ 0.49
HDAC7-223ENST00000485796 WAPLQ7Z5K2 1190 aa18.12■□□□□ 0.49
HDAC7-223ENST00000485796 NWD1Q149M9 1564 aa18.12■□□□□ 0.49
HDAC7-223ENST00000485796 PROSER2Q86WR7 435 aaPredicted RBP18.11■□□□□ 0.49
HDAC7-223ENST00000485796 ROCK2O75116 1388 aaKnown RBP18.11■□□□□ 0.49
HDAC7-223ENST00000485796 ABCC11Q96J66 1382 aa18.11■□□□□ 0.49
HDAC7-223ENST00000485796 PLEKHH1Q9ULM0 1364 aa18.11■□□□□ 0.49
HDAC7-223ENST00000485796 XRN1Q8IZH2 1706 aaKnown RBP18.11■□□□□ 0.49
HDAC7-223ENST00000485796 KIAA1210Q9ULL0 1709 aa18.1■□□□□ 0.49
HDAC7-223ENST00000485796 LAMC1P11047 1609 aa18.1■□□□□ 0.49
HDAC7-223ENST00000485796 RALGAPBQ86X10 1494 aa18.1■□□□□ 0.49
HDAC7-223ENST00000485796 LRRC7Q96NW7 1537 aa18.09■□□□□ 0.49
HDAC7-223ENST00000485796 GPRASP1Q5JY77 1395 aa18.08■□□□□ 0.49
HDAC7-223ENST00000485796 CARD11Q9BXL7 1154 aa18.08■□□□□ 0.48
HDAC7-223ENST00000485796 TMEM94Q12767 1356 aa18.07■□□□□ 0.48
HDAC7-223ENST00000485796 SAFB2Q14151 953 aaKnown RBP eCLIP18.07■□□□□ 0.48
HDAC7-223ENST00000485796 TECPR2O15040 1411 aa18.06■□□□□ 0.48
HDAC7-223ENST00000485796 ZEB1P37275 1124 aaPredicted RBP18.06■□□□□ 0.48
HDAC7-223ENST00000485796 PRAM1Q96QH2 718 aa18.06■□□□□ 0.48
HDAC7-223ENST00000485796 NKTRP30414 1462 aaKnown RBP18.05■□□□□ 0.48
HDAC7-223ENST00000485796 PTCH1Q13635 1447 aa18.05■□□□□ 0.48
HDAC7-223ENST00000485796 CPS1P31327 1500 aa18.04■□□□□ 0.48
HDAC7-223ENST00000485796 CERKQ8TCT0 537 aa18.03■□□□□ 0.48
HDAC7-223ENST00000485796 SIRT1Q96EB6 747 aa18.03■□□□□ 0.48
HDAC7-223ENST00000485796 POGKQ9P215 609 aa18.02■□□□□ 0.48
HDAC7-223ENST00000485796 XIRP1Q702N8 1843 aaKnown RBP18.02■□□□□ 0.47
HDAC7-223ENST00000485796 DLC1Q96QB1 1528 aa18.02■□□□□ 0.47
HDAC7-223ENST00000485796 KNDC1Q76NI1 1749 aa18.01■□□□□ 0.47
HDAC7-223ENST00000485796 FAM135BQ49AJ0 1406 aa18■□□□□ 0.47
HDAC7-223ENST00000485796 ARHGEF28Q8N1W1 1705 aaKnown RBP17.99■□□□□ 0.47
HDAC7-223ENST00000485796 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.99■□□□□ 0.47
HDAC7-223ENST00000485796 C14orf37Q86TY3 774 aa17.99■□□□□ 0.47
HDAC7-223ENST00000485796 HIRIP3Q9BW71 556 aaPredicted RBP17.99■□□□□ 0.47
HDAC7-223ENST00000485796 MINK1Q8N4C8 1332 aaPredicted RBP17.98■□□□□ 0.47
HDAC7-223ENST00000485796 CENPJQ9HC77 1338 aaPredicted RBP17.97■□□□□ 0.47
HDAC7-223ENST00000485796 USP47Q96K76 1375 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms