RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 NPHP4O75161 1426 aaPredicted RBP39.52■■■■□ 3.92
SMDT1-203ENST00000484235 FOXD1Q16676 465 aa39.49■■■■□ 3.91
SMDT1-203ENST00000484235 TMEM131LA2VDJ0 1609 aa39.49■■■■□ 3.91
SMDT1-203ENST00000484235 HDGFP51858 240 aaKnown RBP39.48■■■■□ 3.91
SMDT1-203ENST00000484235 TRPM2O94759 1503 aa39.48■■■■□ 3.91
SMDT1-203ENST00000484235 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.4■■■■□ 3.9
SMDT1-203ENST00000484235 ZFYVE9O95405 1425 aa39.4■■■■□ 3.9
SMDT1-203ENST00000484235 RIMS2Q9UQ26 1411 aa39.4■■■■□ 3.9
SMDT1-203ENST00000484235 TOM1O60784 492 aa39.39■■■■□ 3.9
SMDT1-203ENST00000484235 HSPA1LP34931 641 aa39.38■■■■□ 3.89
SMDT1-203ENST00000484235 IQGAP1P46940 1657 aa39.38■■■■□ 3.89
SMDT1-203ENST00000484235 CLTCL1P53675 1640 aa39.36■■■■□ 3.89
SMDT1-203ENST00000484235 TRIM26Q12899 539 aaPredicted RBP39.36■■■■□ 3.89
SMDT1-203ENST00000484235 PIP4K2BP78356 416 aa39.35■■■■□ 3.89
SMDT1-203ENST00000484235 MYO5BQ9ULV0 1848 aa39.35■■■■□ 3.89
SMDT1-203ENST00000484235 PPP1R15AO75807 674 aaPredicted RBP39.34■■■■□ 3.89
SMDT1-203ENST00000484235 ZNF326Q5BKZ1 582 aaKnown RBP39.33■■■■□ 3.89
SMDT1-203ENST00000484235 ALKQ9UM73 1620 aa39.31■■■■□ 3.88
SMDT1-203ENST00000484235 SCAF1Q9H7N4 1312 aaKnown RBP39.29■■■■□ 3.88
SMDT1-203ENST00000484235 BCANQ96GW7 911 aa39.28■■■■□ 3.88
SMDT1-203ENST00000484235 CCDC144AA2RUR9 1427 aa39.28■■■■□ 3.88
SMDT1-203ENST00000484235 NUTM2DQ5VT03 806 aaPredicted RBP39.27■■■■□ 3.88
SMDT1-203ENST00000484235 PLEKHG1Q9ULL1 1385 aa39.27■■■■□ 3.88
SMDT1-203ENST00000484235 STRCP1A6NGW2 1772 aa39.25■■■■□ 3.87
SMDT1-203ENST00000484235 SLC26A8Q96RN1 970 aa39.23■■■■□ 3.87
SMDT1-203ENST00000484235 LRRC7Q96NW7 1537 aa39.23■■■■□ 3.87
SMDT1-203ENST00000484235 KIF1BO60333 1816 aa39.21■■■■□ 3.87
SMDT1-203ENST00000484235 RPGRIP1LQ68CZ1 1315 aa39.18■■■■□ 3.86
SMDT1-203ENST00000484235 SENP3Q9H4L4 574 aaPredicted RBP39.17■■■■□ 3.86
SMDT1-203ENST00000484235 ANKRD30BQ9BXX2 1392 aa39.15■■■■□ 3.86
SMDT1-203ENST00000484235 TBX22Q9Y458 520 aa39.14■■■■□ 3.86
SMDT1-203ENST00000484235 VGFO15240 615 aaPredicted RBP39.12■■■■□ 3.85
SMDT1-203ENST00000484235 NEXMIFQ5QGS0 1516 aa39.1■■■■□ 3.85
SMDT1-203ENST00000484235 MED1Q15648 1581 aaPredicted RBP39.1■■■■□ 3.85
SMDT1-203ENST00000484235 RGL3Q3MIN7 710 aa39.1■■■■□ 3.85
SMDT1-203ENST00000484235 SPATA31E1Q6ZUB1 1445 aa39.1■■■■□ 3.85
SMDT1-203ENST00000484235 KCNA6P17658 529 aa39.08■■■■□ 3.85
SMDT1-203ENST00000484235 ADAMTS13Q76LX8 1427 aa39.06■■■■□ 3.84
SMDT1-203ENST00000484235 DIP2AQ14689 1571 aa38.98■■■■□ 3.83
SMDT1-203ENST00000484235 SETBP1Q9Y6X0 1596 aa38.98■■■■□ 3.83
SMDT1-203ENST00000484235 PIK3R4Q99570 1358 aa38.97■■■■□ 3.83
SMDT1-203ENST00000484235 PPLO60437 1756 aa38.91■■■■□ 3.82
SMDT1-203ENST00000484235 NRXN3Q9Y4C0 1643 aa38.91■■■■□ 3.82
SMDT1-203ENST00000484235 XIRP1Q702N8 1843 aaKnown RBP38.91■■■■□ 3.82
SMDT1-203ENST00000484235 PROSER2Q86WR7 435 aaPredicted RBP38.9■■■■□ 3.82
SMDT1-203ENST00000484235 ADGRF5Q8IZF2 1346 aa38.89■■■■□ 3.82
SMDT1-203ENST00000484235 NWD1Q149M9 1564 aa38.87■■■■□ 3.81
SMDT1-203ENST00000484235 NKTRP30414 1462 aaKnown RBP38.86■■■■□ 3.81
SMDT1-203ENST00000484235 METP08581 1390 aa38.85■■■■□ 3.81
SMDT1-203ENST00000484235 CHD2O14647 1828 aaKnown RBP38.85■■■■□ 3.81
SMDT1-203ENST00000484235 AMOTL2Q9Y2J4 779 aa38.85■■■■□ 3.81
SMDT1-203ENST00000484235 TMEM94Q12767 1356 aa38.82■■■■□ 3.81
SMDT1-203ENST00000484235 PTPRUQ92729 1446 aa38.8■■■■□ 3.8
SMDT1-203ENST00000484235 IFT172Q9UG01 1749 aa38.79■■■■□ 3.8
SMDT1-203ENST00000484235 DHX57Q6P158 1386 aaKnown RBP38.79■■■■□ 3.8
SMDT1-203ENST00000484235 FAM135BQ49AJ0 1406 aa38.78■■■■□ 3.8
SMDT1-203ENST00000484235 RBM33Q96EV2 1170 aaKnown RBP38.77■■■■□ 3.8
SMDT1-203ENST00000484235 STAC3Q96MF2 364 aa38.77■■■■□ 3.8
SMDT1-203ENST00000484235 PHF23Q9BUL5 403 aaPredicted RBP38.77■■■■□ 3.8
SMDT1-203ENST00000484235 DCAF11Q8TEB1 546 aa38.74■■■■□ 3.79
SMDT1-203ENST00000484235 MYOM2P54296 1465 aa38.73■■■■□ 3.79
SMDT1-203ENST00000484235 PIK3C2GO75747 1445 aa38.73■■■■□ 3.79
SMDT1-203ENST00000484235 PCGF6Q9BYE7 350 aa38.73■■■■□ 3.79
SMDT1-203ENST00000484235 NRXN1Q9ULB1 1477 aa38.71■■■■□ 3.79
SMDT1-203ENST00000484235 KDM2AQ9Y2K7 1162 aa38.7■■■■□ 3.79
SMDT1-203ENST00000484235 NCOA3Q9Y6Q9 1424 aa38.7■■■■□ 3.79
SMDT1-203ENST00000484235 C14orf93Q9H972 538 aaKnown RBP38.68■■■■□ 3.78
SMDT1-203ENST00000484235 RGS17Q9UGC6 210 aaPredicted RBP38.68■■■■□ 3.78
SMDT1-203ENST00000484235 SETD1AO15047 1707 aaKnown RBP38.66■■■■□ 3.78
SMDT1-203ENST00000484235 SIN3AQ96ST3 1273 aa38.65■■■■□ 3.78
SMDT1-203ENST00000484235 XRN1Q8IZH2 1706 aaKnown RBP38.65■■■■□ 3.78
SMDT1-203ENST00000484235 C14orf37Q86TY3 774 aa38.63■■■■□ 3.77
SMDT1-203ENST00000484235 MSH6P52701 1360 aa38.62■■■■□ 3.77
SMDT1-203ENST00000484235 CFAP70Q5T0N1 1121 aa38.61■■■■□ 3.77
SMDT1-203ENST00000484235 TMEM132EQ6IEE7 984 aa38.59■■■■□ 3.77
SMDT1-203ENST00000484235 C19orf44Q9H6X5 657 aa38.59■■■■□ 3.77
SMDT1-203ENST00000484235 NEUROD1Q13562 356 aa38.58■■■■□ 3.77
SMDT1-203ENST00000484235 PRAG1Q86YV5 1406 aa38.56■■■■□ 3.76
SMDT1-203ENST00000484235 PTCH1Q13635 1447 aa38.55■■■■□ 3.76
SMDT1-203ENST00000484235 STK26Q9P289 416 aa38.54■■■■□ 3.76
SMDT1-203ENST00000484235 LRPPRCP42704 1394 aaKnown RBP38.54■■■■□ 3.76
SMDT1-203ENST00000484235 ROBO2Q9HCK4 1378 aa38.54■■■■□ 3.76
SMDT1-203ENST00000484235 ROBO1Q9Y6N7 1651 aa38.53■■■■□ 3.76
SMDT1-203ENST00000484235 ABCC11Q96J66 1382 aa38.52■■■■□ 3.76
SMDT1-203ENST00000484235 L3MBTL2Q969R5 705 aa38.51■■■■□ 3.76
SMDT1-203ENST00000484235 ATF3P18847 181 aa38.49■■■■□ 3.75
SMDT1-203ENST00000484235 CADPS2Q86UW7 1296 aa38.49■■■■□ 3.75
SMDT1-203ENST00000484235 SLAIN2Q9P270 581 aa38.49■■■■□ 3.75
SMDT1-203ENST00000484235 LAMC1P11047 1609 aa38.49■■■■□ 3.75
SMDT1-203ENST00000484235 ASXL1Q8IXJ9 1541 aa38.48■■■■□ 3.75
SMDT1-203ENST00000484235 YTHDC2Q9H6S0 1430 aaKnown RBP38.48■■■■□ 3.75
SMDT1-203ENST00000484235 TECPR2O15040 1411 aa38.46■■■■□ 3.75
SMDT1-203ENST00000484235 SIRT1Q96EB6 747 aa38.44■■■■□ 3.74
SMDT1-203ENST00000484235 DCCP43146 1447 aa38.41■■■■□ 3.74
SMDT1-203ENST00000484235 ADGRL3Q9HAR2 1447 aa38.41■■■■□ 3.74
SMDT1-203ENST00000484235 POTEAQ6S8J7 498 aa38.4■■■■□ 3.74
SMDT1-203ENST00000484235 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.4■■■■□ 3.74
SMDT1-203ENST00000484235 WAPLQ7Z5K2 1190 aa38.39■■■■□ 3.74
SMDT1-203ENST00000484235 ADGRB1O14514 1584 aa38.36■■■■□ 3.73
SMDT1-203ENST00000484235 KNDC1Q76NI1 1749 aa38.32■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 194.9 ms