RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 ERBINQ96RT1 1412 aa15□□□□□ -0.01
SEC61A1-205ENST00000483956 ATP10AO60312 1499 aa15□□□□□ -0.01
SEC61A1-205ENST00000483956 PLXNC1O60486 1568 aa15□□□□□ -0.01
SEC61A1-205ENST00000483956 L1TD1Q5T7N2 865 aaKnown RBP15□□□□□ -0.01
SEC61A1-205ENST00000483956 CDCA7LQ96GN5 454 aa15□□□□□ -0.01
SEC61A1-205ENST00000483956 NBPF1Q3BBV0 1214 aa14.98□□□□□ -0.01
SEC61A1-205ENST00000483956 PRDM4Q9UKN5 801 aa14.98□□□□□ -0.01
SEC61A1-205ENST00000483956 FBLN2P98095 1184 aa14.97□□□□□ -0.01
SEC61A1-205ENST00000483956 MAGI2Q86UL8 1455 aa14.97□□□□□ -0.01
SEC61A1-205ENST00000483956 SYCP2Q9BX26 1530 aa14.96□□□□□ -0.02
SEC61A1-205ENST00000483956 RGS3P49796 1198 aa14.95□□□□□ -0.02
SEC61A1-205ENST00000483956 CRBNQ96SW2 442 aa14.95□□□□□ -0.02
SEC61A1-205ENST00000483956 PANK3Q9H999 370 aa14.95□□□□□ -0.02
SEC61A1-205ENST00000483956 CLASP1Q7Z460 1538 aa14.94□□□□□ -0.02
SEC61A1-205ENST00000483956 KDM2BQ8NHM5 1336 aa14.94□□□□□ -0.02
SEC61A1-205ENST00000483956 XRCC6P12956 609 aaKnown RBP eCLIP14.94□□□□□ -0.02
SEC61A1-205ENST00000483956 TMF1P82094 1093 aa14.94□□□□□ -0.02
SEC61A1-205ENST00000483956 PDE4CQ08493 712 aa14.94□□□□□ -0.02
SEC61A1-205ENST00000483956 CC2D1BQ5T0F9 858 aaKnown RBP14.94□□□□□ -0.02
SEC61A1-205ENST00000483956 CALD1Q05682 793 aaKnown RBP14.93□□□□□ -0.02
SEC61A1-205ENST00000483956 PANK2Q9BZ23 570 aa14.93□□□□□ -0.02
SEC61A1-205ENST00000483956 PLIN1O60240 522 aa14.93□□□□□ -0.02
SEC61A1-205ENST00000483956 IQGAP1P46940 1657 aa14.92□□□□□ -0.02
SEC61A1-205ENST00000483956 WDR7Q9Y4E6 1490 aa14.92□□□□□ -0.02
SEC61A1-205ENST00000483956 DUOX2Q9NRD8 1548 aa14.91□□□□□ -0.02
SEC61A1-205ENST00000483956 RGL3Q3MIN7 710 aa14.91□□□□□ -0.02
SEC61A1-205ENST00000483956 PDCL3Q9H2J4 239 aa14.91□□□□□ -0.02
SEC61A1-205ENST00000483956 TTC37Q6PGP7 1564 aa14.91□□□□□ -0.02
SEC61A1-205ENST00000483956 SYNMO15061 1565 aa14.9□□□□□ -0.02
SEC61A1-205ENST00000483956 CENPJQ9HC77 1338 aaPredicted RBP14.9□□□□□ -0.02
SEC61A1-205ENST00000483956 ARHGAP5Q13017 1502 aa14.9□□□□□ -0.02
SEC61A1-205ENST00000483956 CENPQQ7L2Z9 268 aaPredicted RBP14.9□□□□□ -0.02
SEC61A1-205ENST00000483956 MADDQ8WXG6 1647 aa14.89□□□□□ -0.03
SEC61A1-205ENST00000483956 C8orf34Q49A92 452 aa14.89□□□□□ -0.03
SEC61A1-205ENST00000483956 ZNF521Q96K83 1311 aa14.89□□□□□ -0.03
SEC61A1-205ENST00000483956 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.88□□□□□ -0.032e-6■■■□□ 16.6
SEC61A1-205ENST00000483956 ADAMTS8Q9UP79 889 aa14.88□□□□□ -0.03
SEC61A1-205ENST00000483956 FAM161AQ3B820 660 aa14.87□□□□□ -0.03
SEC61A1-205ENST00000483956 DUSP27Q5VZP5 1158 aa14.87□□□□□ -0.03
SEC61A1-205ENST00000483956 PLEKHH1Q9ULM0 1364 aa14.87□□□□□ -0.03
SEC61A1-205ENST00000483956 GOLGA6L3A6NEY3 463 aa14.87□□□□□ -0.03
SEC61A1-205ENST00000483956 PIK3C2GO75747 1445 aa14.87□□□□□ -0.03
SEC61A1-205ENST00000483956 C20orf194Q5TEA3 1177 aa14.87□□□□□ -0.03
SEC61A1-205ENST00000483956 SPHKAPQ2M3C7 1700 aa14.85□□□□□ -0.03
SEC61A1-205ENST00000483956 PPP2R1AP30153 589 aa14.85□□□□□ -0.03
SEC61A1-205ENST00000483956 NPC1L1Q9UHC9 1359 aa14.85□□□□□ -0.03
SEC61A1-205ENST00000483956 ERBB4Q15303 1308 aa14.84□□□□□ -0.03
SEC61A1-205ENST00000483956 ASXL1Q8IXJ9 1541 aa14.84□□□□□ -0.03
SEC61A1-205ENST00000483956 FSD2A1L4K1 749 aa14.84□□□□□ -0.03
SEC61A1-205ENST00000483956 SLKQ9H2G2 1235 aaPredicted RBP14.84□□□□□ -0.03
SEC61A1-205ENST00000483956 ABCC2Q92887 1545 aa14.84□□□□□ -0.03
SEC61A1-205ENST00000483956 MYOM1P52179 1685 aa14.84□□□□□ -0.03
SEC61A1-205ENST00000483956 TPM2P07951 284 aa14.84□□□□□ -0.03
SEC61A1-205ENST00000483956 AMER1Q5JTC6 1135 aaPredicted RBP14.84□□□□□ -0.03
SEC61A1-205ENST00000483956 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.84□□□□□ -0.03
SEC61A1-205ENST00000483956 EIF3AQ14152 1382 aaKnown RBP14.83□□□□□ -0.04
SEC61A1-205ENST00000483956 WDR43Q15061 677 aaKnown RBP eCLIP14.83□□□□□ -0.04
SEC61A1-205ENST00000483956 SCAPERQ9BY12 1400 aa14.83□□□□□ -0.04
SEC61A1-205ENST00000483956 ESPNB1AK53 854 aa14.83□□□□□ -0.04
SEC61A1-205ENST00000483956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.83□□□□□ -0.04
SEC61A1-205ENST00000483956 KNSTRNQ9Y448 316 aa14.83□□□□□ -0.04
SEC61A1-205ENST00000483956 GOLGA2Q08379 1002 aa14.82□□□□□ -0.04
SEC61A1-205ENST00000483956 GZF1Q9H116 711 aaPredicted RBP14.82□□□□□ -0.04
SEC61A1-205ENST00000483956 CEP152O94986 1710 aa14.82□□□□□ -0.04
SEC61A1-205ENST00000483956 CDCA8Q53HL2 280 aa14.82□□□□□ -0.04
SEC61A1-205ENST00000483956 TRPM2O94759 1503 aa14.82□□□□□ -0.04
SEC61A1-205ENST00000483956 SCAF11Q99590 1463 aaKnown RBP14.82□□□□□ -0.04
SEC61A1-205ENST00000483956 TRMT2AQ8IZ69 625 aaKnown RBP14.81□□□□□ -0.04
SEC61A1-205ENST00000483956 STAC3Q96MF2 364 aa14.81□□□□□ -0.04
SEC61A1-205ENST00000483956 VIRMAQ69YN4 1812 aaKnown RBP14.81□□□□□ -0.04
SEC61A1-205ENST00000483956 BCL11BQ9C0K0 894 aaPredicted RBP14.81□□□□□ -0.04
SEC61A1-205ENST00000483956 SLFN5Q08AF3 891 aa14.8□□□□□ -0.04
SEC61A1-205ENST00000483956 KIAA1210Q9ULL0 1709 aa14.8□□□□□ -0.04
SEC61A1-205ENST00000483956 SHROOM2Q13796 1616 aa14.8□□□□□ -0.04
SEC61A1-205ENST00000483956 NKTRP30414 1462 aaKnown RBP14.78□□□□□ -0.04
SEC61A1-205ENST00000483956 KDM5AP29375 1690 aaKnown RBP14.78□□□□□ -0.04
SEC61A1-205ENST00000483956 NEURL4Q96JN8 1562 aa14.77□□□□□ -0.04
SEC61A1-205ENST00000483956 ABCC1P33527 1531 aa14.77□□□□□ -0.05
SEC61A1-205ENST00000483956 PTPRTO14522 1441 aa14.77□□□□□ -0.05
SEC61A1-205ENST00000483956 KIAA1211Q6ZU35 1233 aa14.76□□□□□ -0.05
SEC61A1-205ENST00000483956 DEPDC5O75140 1603 aa14.75□□□□□ -0.05
SEC61A1-205ENST00000483956 NGEFQ8N5V2 710 aa14.75□□□□□ -0.05
SEC61A1-205ENST00000483956 CLTCL1P53675 1640 aa14.75□□□□□ -0.05
SEC61A1-205ENST00000483956 PLCH2O75038 1416 aa14.75□□□□□ -0.05
SEC61A1-205ENST00000483956 MYH16Q9H6N6 1097 aa14.75□□□□□ -0.05
SEC61A1-205ENST00000483956 USP19O94966 1318 aa14.74□□□□□ -0.05
SEC61A1-205ENST00000483956 RIMBP3CA6NJZ7 1639 aa14.74□□□□□ -0.05
SEC61A1-205ENST00000483956 RIMBP3BA6NNM3 1639 aa14.74□□□□□ -0.05
SEC61A1-205ENST00000483956 RIMBP3Q9UFD9 1639 aa14.74□□□□□ -0.05
SEC61A1-205ENST00000483956 PDIA4P13667 645 aaKnown RBP14.74□□□□□ -0.05
SEC61A1-205ENST00000483956 NINLQ9Y2I6 1382 aa14.73□□□□□ -0.05
SEC61A1-205ENST00000483956 MRE11P49959 708 aa14.73□□□□□ -0.05
SEC61A1-205ENST00000483956 ANTXR1Q9H6X2 564 aa14.73□□□□□ -0.05
SEC61A1-205ENST00000483956 TET3O43151 1660 aa14.73□□□□□ -0.05
SEC61A1-205ENST00000483956 ZHX1Q9UKY1 873 aaPredicted RBP14.72□□□□□ -0.05
SEC61A1-205ENST00000483956 E9PSI1 815 aa14.72□□□□□ -0.05
SEC61A1-205ENST00000483956 RTEL1-TNFRSF6BF6WH68 1400 aa14.71□□□□□ -0.05
SEC61A1-205ENST00000483956 CHD1O14646 1710 aa14.71□□□□□ -0.05
SEC61A1-205ENST00000483956 RIPK4P57078 832 aa14.71□□□□□ -0.05
SEC61A1-205ENST00000483956 BECN1Q14457 450 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms