RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 RGL3Q3MIN7 710 aa22.2■■□□□ 1.14
CCM2-215ENST00000482714 UBR1Q8IWV7 1749 aa22.2■■□□□ 1.14
CCM2-215ENST00000482714 TXNDC2Q86VQ3 553 aa22.18■■□□□ 1.14
CCM2-215ENST00000482714 SLIT1O75093 1534 aa22.18■■□□□ 1.14
CCM2-215ENST00000482714 ARHGAP23Q9P227 1491 aa22.18■■□□□ 1.14
CCM2-215ENST00000482714 ZFYVE9O95405 1425 aa22.14■■□□□ 1.14
CCM2-215ENST00000482714 RIMS2Q9UQ26 1411 aa22.14■■□□□ 1.13
CCM2-215ENST00000482714 LTKP29376 864 aa22.13■■□□□ 1.13
CCM2-215ENST00000482714 DMRT2Q9Y5R5 561 aa22.13■■□□□ 1.13
CCM2-215ENST00000482714 DCAF11Q8TEB1 546 aa22.11■■□□□ 1.13
CCM2-215ENST00000482714 L3MBTL2Q969R5 705 aa22.11■■□□□ 1.13
CCM2-215ENST00000482714 PPP1R15AO75807 674 aaPredicted RBP22.1■■□□□ 1.13
CCM2-215ENST00000482714 TONSLQ96HA7 1378 aa22.1■■□□□ 1.13
CCM2-215ENST00000482714 SCAF11Q99590 1463 aaKnown RBP22.09■■□□□ 1.13
CCM2-215ENST00000482714 MYO5BQ9ULV0 1848 aa22.08■■□□□ 1.12
CCM2-215ENST00000482714 MED14O60244 1454 aa22.07■■□□□ 1.12
CCM2-215ENST00000482714 NCKAP5LQ9HCH0 1330 aa22.07■■□□□ 1.12
CCM2-215ENST00000482714 NEXMIFQ5QGS0 1516 aa22.06■■□□□ 1.12
CCM2-215ENST00000482714 PLEKHG1Q9ULL1 1385 aa22.06■■□□□ 1.12
CCM2-215ENST00000482714 KDM2AQ9Y2K7 1162 aa22.04■■□□□ 1.12
CCM2-215ENST00000482714 NUTM2DQ5VT03 806 aaPredicted RBP22.03■■□□□ 1.12
CCM2-215ENST00000482714 MYOM2P54296 1465 aa22.03■■□□□ 1.12
CCM2-215ENST00000482714 TBX22Q9Y458 520 aa22.03■■□□□ 1.12
CCM2-215ENST00000482714 ADGRF5Q8IZF2 1346 aa22.02■■□□□ 1.12
CCM2-215ENST00000482714 NPHP4O75161 1426 aaPredicted RBP22.01■■□□□ 1.11
CCM2-215ENST00000482714 BCANQ96GW7 911 aa22.01■■□□□ 1.11
CCM2-215ENST00000482714 PPLO60437 1756 aa22.01■■□□□ 1.11
CCM2-215ENST00000482714 NRXN1Q9ULB1 1477 aa22■■□□□ 1.11
CCM2-215ENST00000482714 C14orf93Q9H972 538 aaKnown RBP21.99■■□□□ 1.11
CCM2-215ENST00000482714 IFT172Q9UG01 1749 aa21.98■■□□□ 1.11
CCM2-215ENST00000482714 STRCQ7RTU9 1775 aa21.97■■□□□ 1.11
CCM2-215ENST00000482714 POLR1AO95602 1720 aaPredicted RBP21.95■■□□□ 1.1
CCM2-215ENST00000482714 PIK3C2GO75747 1445 aa21.95■■□□□ 1.1
CCM2-215ENST00000482714 PIK3R4Q99570 1358 aa21.94■■□□□ 1.1
CCM2-215ENST00000482714 SETBP1Q9Y6X0 1596 aa21.94■■□□□ 1.1
CCM2-215ENST00000482714 SLC26A8Q96RN1 970 aa21.93■■□□□ 1.1
CCM2-215ENST00000482714 ADAMTS13Q76LX8 1427 aa21.93■■□□□ 1.1
CCM2-215ENST00000482714 PRAG1Q86YV5 1406 aa21.93■■□□□ 1.1
CCM2-215ENST00000482714 ZEB1P37275 1124 aaPredicted RBP21.92■■□□□ 1.1
CCM2-215ENST00000482714 IQGAP1P46940 1657 aa21.9■■□□□ 1.1
CCM2-215ENST00000482714 CFAP70Q5T0N1 1121 aa21.9■■□□□ 1.1
CCM2-215ENST00000482714 DIP2AQ14689 1571 aa21.89■■□□□ 1.09
CCM2-215ENST00000482714 ILDR1Q86SU0 546 aaPredicted RBP21.89■■□□□ 1.09
CCM2-215ENST00000482714 NBPF8Q3BBV2 869 aa21.88■■□□□ 1.09
CCM2-215ENST00000482714 ALKQ9UM73 1620 aa21.87■■□□□ 1.09
CCM2-215ENST00000482714 KCNA6P17658 529 aa21.87■■□□□ 1.09
CCM2-215ENST00000482714 NRXN3Q9Y4C0 1643 aa21.85■■□□□ 1.09
CCM2-215ENST00000482714 SIRT1Q96EB6 747 aa21.84■■□□□ 1.09
CCM2-215ENST00000482714 LAMC1P11047 1609 aa21.83■■□□□ 1.09
CCM2-215ENST00000482714 KIAA1210Q9ULL0 1709 aa21.83■■□□□ 1.09
CCM2-215ENST00000482714 SENP3Q9H4L4 574 aaPredicted RBP21.83■■□□□ 1.08
CCM2-215ENST00000482714 METP08581 1390 aa21.83■■□□□ 1.08
CCM2-215ENST00000482714 AMOTL2Q9Y2J4 779 aa21.82■■□□□ 1.08
CCM2-215ENST00000482714 ABCC11Q96J66 1382 aa21.81■■□□□ 1.08
CCM2-215ENST00000482714 NBPF1Q3BBV0 1214 aa21.81■■□□□ 1.08
CCM2-215ENST00000482714 TMEM132EQ6IEE7 984 aa21.81■■□□□ 1.08
CCM2-215ENST00000482714 LRPPRCP42704 1394 aaKnown RBP21.79■■□□□ 1.08
CCM2-215ENST00000482714 CERKQ8TCT0 537 aa21.79■■□□□ 1.08
CCM2-215ENST00000482714 GPRASP1Q5JY77 1395 aa21.79■■□□□ 1.08
CCM2-215ENST00000482714 ROCK2O75116 1388 aaKnown RBP21.78■■□□□ 1.08
CCM2-215ENST00000482714 RALGAPBQ86X10 1494 aa21.77■■□□□ 1.07
CCM2-215ENST00000482714 FBXO41Q8TF61 875 aa21.77■■□□□ 1.07
CCM2-215ENST00000482714 YTHDC2Q9H6S0 1430 aaKnown RBP21.76■■□□□ 1.07
CCM2-215ENST00000482714 CARD11Q9BXL7 1154 aa21.76■■□□□ 1.07
CCM2-215ENST00000482714 ADGRB1O14514 1584 aa21.76■■□□□ 1.07
CCM2-215ENST00000482714 SETD1AO15047 1707 aaKnown RBP21.75■■□□□ 1.07
CCM2-215ENST00000482714 TECPR2O15040 1411 aa21.74■■□□□ 1.07
CCM2-215ENST00000482714 PTPRUQ92729 1446 aa21.74■■□□□ 1.07
CCM2-215ENST00000482714 CHD2O14647 1828 aaKnown RBP21.74■■□□□ 1.07
CCM2-215ENST00000482714 TRPM1Q7Z4N2 1603 aa21.74■■□□□ 1.07
CCM2-215ENST00000482714 ZNF335Q9H4Z2 1342 aaPredicted RBP21.73■■□□□ 1.07
CCM2-215ENST00000482714 STK26Q9P289 416 aa21.73■■□□□ 1.07
CCM2-215ENST00000482714 FAM135BQ49AJ0 1406 aa21.71■■□□□ 1.07
CCM2-215ENST00000482714 NCOA3Q9Y6Q9 1424 aa21.71■■□□□ 1.07
CCM2-215ENST00000482714 PROSER2Q86WR7 435 aaPredicted RBP21.71■■□□□ 1.07
CCM2-215ENST00000482714 TRAK1Q9UPV9 953 aa21.71■■□□□ 1.07
CCM2-215ENST00000482714 CPS1P31327 1500 aa21.7■■□□□ 1.06
CCM2-215ENST00000482714 NKTRP30414 1462 aaKnown RBP21.7■■□□□ 1.06
CCM2-215ENST00000482714 SLC24A1O60721 1099 aa21.7■■□□□ 1.06
CCM2-215ENST00000482714 ASXL1Q8IXJ9 1541 aa21.7■■□□□ 1.06
CCM2-215ENST00000482714 PTCH1Q13635 1447 aa21.69■■□□□ 1.06
CCM2-215ENST00000482714 NWD1Q149M9 1564 aa21.69■■□□□ 1.06
CCM2-215ENST00000482714 DLC1Q96QB1 1528 aa21.69■■□□□ 1.06
CCM2-215ENST00000482714 LTBP4Q8N2S1 1624 aa21.68■■□□□ 1.06
CCM2-215ENST00000482714 POGKQ9P215 609 aa21.67■■□□□ 1.06
CCM2-215ENST00000482714 EIF3AQ14152 1382 aaKnown RBP21.66■■□□□ 1.06
CCM2-215ENST00000482714 XRN1Q8IZH2 1706 aaKnown RBP21.65■■□□□ 1.06
CCM2-215ENST00000482714 ROBO2Q9HCK4 1378 aa21.65■■□□□ 1.06
CCM2-215ENST00000482714 PRAM1Q96QH2 718 aa21.64■■□□□ 1.05
CCM2-215ENST00000482714 EIF4G2P78344 907 aaKnown RBP eCLIP21.63■■□□□ 1.05
CCM2-215ENST00000482714 WAPLQ7Z5K2 1190 aa21.63■■□□□ 1.05
CCM2-215ENST00000482714 KNDC1Q76NI1 1749 aa21.63■■□□□ 1.05
CCM2-215ENST00000482714 C19orf44Q9H6X5 657 aa21.62■■□□□ 1.05
CCM2-215ENST00000482714 CENPJQ9HC77 1338 aaPredicted RBP21.62■■□□□ 1.05
CCM2-215ENST00000482714 TMEM94Q12767 1356 aa21.61■■□□□ 1.05
CCM2-215ENST00000482714 LRRC7Q96NW7 1537 aa21.61■■□□□ 1.05
CCM2-215ENST00000482714 STRCP1A6NGW2 1772 aa21.6■■□□□ 1.05
CCM2-215ENST00000482714 USP47Q96K76 1375 aa21.58■■□□□ 1.04
CCM2-215ENST00000482714 SBNO2Q9Y2G9 1366 aa21.57■■□□□ 1.04
CCM2-215ENST00000482714 ST20-MTHFSA0A0A6YYL1 179 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms