RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 BLMP54132 1417 aaPredicted RBP11.39□□□□□ -0.59
CHD6-209ENST00000482596 UBR1Q8IWV7 1749 aa11.39□□□□□ -0.59
CHD6-209ENST00000482596 INO80Q9ULG1 1556 aaPredicted RBP11.39□□□□□ -0.59
CHD6-209ENST00000482596 KDM5AP29375 1690 aaKnown RBP11.39□□□□□ -0.59
CHD6-209ENST00000482596 SYCP2Q9BX26 1530 aa11.36□□□□□ -0.59
CHD6-209ENST00000482596 SLC34A2O95436 690 aa11.36□□□□□ -0.59
CHD6-209ENST00000482596 KCNA6P17658 529 aa11.36□□□□□ -0.59
CHD6-209ENST00000482596 NCOA2Q15596 1464 aa11.36□□□□□ -0.59
CHD6-209ENST00000482596 TXNDC2Q86VQ3 553 aa11.35□□□□□ -0.59
CHD6-209ENST00000482596 AKT1S1Q96B36 256 aa11.35□□□□□ -0.59
CHD6-209ENST00000482596 CAMTA1Q9Y6Y1 1673 aa11.35□□□□□ -0.59
CHD6-209ENST00000482596 MAST1Q9Y2H9 1570 aa11.34□□□□□ -0.59
CHD6-209ENST00000482596 ARHGAP23Q9P227 1491 aa11.34□□□□□ -0.59
CHD6-209ENST00000482596 TROQ12816 1431 aaPredicted RBP11.34□□□□□ -0.59
CHD6-209ENST00000482596 SPDYE2BA6NHP3 402 aa11.33□□□□□ -0.6
CHD6-209ENST00000482596 SPDYE6P0CI01 402 aa11.33□□□□□ -0.6
CHD6-209ENST00000482596 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
CHD6-209ENST00000482596 ABCC3O15438 1527 aa11.33□□□□□ -0.6
CHD6-209ENST00000482596 UTRNP46939 3433 aa11.33□□□□□ -0.6
CHD6-209ENST00000482596 CDC42BPAQ5VT25 1732 aa11.32□□□□□ -0.6
CHD6-209ENST00000482596 HNRNPMP52272 730 aaKnown RBP eCLIP11.32□□□□□ -0.66e-8■■■■■ 31.3
CHD6-209ENST00000482596 NKTRP30414 1462 aaKnown RBP11.32□□□□□ -0.6
CHD6-209ENST00000482596 SLIT1O75093 1534 aa11.31□□□□□ -0.6
CHD6-209ENST00000482596 ADAMTS2O95450 1211 aa11.31□□□□□ -0.6
CHD6-209ENST00000482596 R3HDM1Q15032 1099 aaKnown RBP11.31□□□□□ -0.6
CHD6-209ENST00000482596 USP21Q9UK80 565 aa11.31□□□□□ -0.6
CHD6-209ENST00000482596 TRPC5Q9UL62 973 aaPredicted RBP11.31□□□□□ -0.6
CHD6-209ENST00000482596 ATRNO75882 1429 aa11.3□□□□□ -0.6
CHD6-209ENST00000482596 POTEHQ6S545 545 aa11.3□□□□□ -0.6
CHD6-209ENST00000482596 SLC26A8Q96RN1 970 aa11.3□□□□□ -0.6
CHD6-209ENST00000482596 ZNF777Q9ULD5 760 aaPredicted RBP11.3□□□□□ -0.6
CHD6-209ENST00000482596 ATP1B4Q9UN42 357 aaPredicted RBP11.3□□□□□ -0.6
CHD6-209ENST00000482596 BRWD3Q6RI45 1802 aa11.3□□□□□ -0.6
CHD6-209ENST00000482596 WASHC2CQ9Y4E1 1318 aa11.29□□□□□ -0.6
CHD6-209ENST00000482596 CFAP65Q6ZU64 1925 aaKnown RBP11.29□□□□□ -0.6
CHD6-209ENST00000482596 RTEL1-TNFRSF6BF6WH68 1400 aa11.27□□□□□ -0.6
CHD6-209ENST00000482596 CLIP1P30622 1438 aa11.27□□□□□ -0.6
CHD6-209ENST00000482596 SETD5Q9C0A6 1442 aa11.27□□□□□ -0.6
CHD6-209ENST00000482596 LRRIQ1Q96JM4 1722 aa11.27□□□□□ -0.61
CHD6-209ENST00000482596 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.27□□□□□ -0.61
CHD6-209ENST00000482596 SF3B2Q13435 895 aaKnown RBP11.27□□□□□ -0.61
CHD6-209ENST00000482596 CDK11AQ9UQ88 783 aaPredicted RBP11.27□□□□□ -0.61
CHD6-209ENST00000482596 PNPLA6Q8IY17 1366 aa11.27□□□□□ -0.61
CHD6-209ENST00000482596 TET3O43151 1660 aa11.27□□□□□ -0.61
CHD6-209ENST00000482596 BRINP3Q76B58 766 aa11.26□□□□□ -0.61
CHD6-209ENST00000482596 ZNF692Q9BU19 519 aaPredicted RBP11.26□□□□□ -0.61
CHD6-209ENST00000482596 KIF3BO15066 747 aa11.25□□□□□ -0.61
CHD6-209ENST00000482596 ERVK-7P63135 1459 aa11.25□□□□□ -0.61
CHD6-209ENST00000482596 UNC13BO14795 1591 aa11.24□□□□□ -0.61
CHD6-209ENST00000482596 EID1Q9Y6B2 187 aa11.24□□□□□ -0.61
CHD6-209ENST00000482596 REM2Q8IYK8 340 aaPredicted RBP11.23□□□□□ -0.61
CHD6-209ENST00000482596 DHX29Q7Z478 1369 aaKnown RBP11.22□□□□□ -0.61
CHD6-209ENST00000482596 FNBP4Q8N3X1 1017 aaPredicted RBP11.22□□□□□ -0.61
CHD6-209ENST00000482596 DDX17Q92841 729 aaKnown RBP11.22□□□□□ -0.61
CHD6-209ENST00000482596 GPATCH8Q9UKJ3 1502 aaKnown RBP11.22□□□□□ -0.61
CHD6-209ENST00000482596 CHD2O14647 1828 aaKnown RBP11.21□□□□□ -0.61
CHD6-209ENST00000482596 ASXL1Q8IXJ9 1541 aa11.21□□□□□ -0.61
CHD6-209ENST00000482596 CAMSAP2Q08AD1 1489 aa11.2□□□□□ -0.62
CHD6-209ENST00000482596 LRRC59Q96AG4 307 aaKnown RBP11.2□□□□□ -0.62
CHD6-209ENST00000482596 MROH1Q8NDA8 1641 aa11.2□□□□□ -0.62
CHD6-209ENST00000482596 CHD4Q14839 1912 aa11.19□□□□□ -0.62
CHD6-209ENST00000482596 SPHKAPQ2M3C7 1700 aa11.19□□□□□ -0.62
CHD6-209ENST00000482596 SSUH2Q9Y2M2 353 aa11.19□□□□□ -0.62
CHD6-209ENST00000482596 GLI3P10071 1580 aa11.19□□□□□ -0.62
CHD6-209ENST00000482596 TMEM2Q9UHN6 1383 aa11.18□□□□□ -0.62
CHD6-209ENST00000482596 PIK3C2BO00750 1634 aa11.18□□□□□ -0.62
CHD6-209ENST00000482596 BAG6P46379 1132 aa11.18□□□□□ -0.62
CHD6-209ENST00000482596 EN1Q05925 392 aaPredicted RBP11.18□□□□□ -0.62
CHD6-209ENST00000482596 C14orf37Q86TY3 774 aa11.18□□□□□ -0.62
CHD6-209ENST00000482596 CADPS2Q86UW7 1296 aa11.18□□□□□ -0.62
CHD6-209ENST00000482596 GJD4Q96KN9 370 aaPredicted RBP11.18□□□□□ -0.62
CHD6-209ENST00000482596 GIGYF1O75420 1035 aaPredicted RBP11.16□□□□□ -0.62
CHD6-209ENST00000482596 ATF3P18847 181 aa11.16□□□□□ -0.62
CHD6-209ENST00000482596 CHRDL2Q6WN34 429 aa11.16□□□□□ -0.62
CHD6-209ENST00000482596 PCDH10Q9P2E7 1040 aa11.16□□□□□ -0.62
CHD6-209ENST00000482596 KIAA1107Q9UPP5 1409 aa11.16□□□□□ -0.62
CHD6-209ENST00000482596 NINLQ9Y2I6 1382 aa11.16□□□□□ -0.62
CHD6-209ENST00000482596 ARHGAP35Q9NRY4 1499 aa11.15□□□□□ -0.62
CHD6-209ENST00000482596 C19orf44Q9H6X5 657 aa11.14□□□□□ -0.63
CHD6-209ENST00000482596 PPP1R1BQ9UD71 204 aaPredicted RBP11.14□□□□□ -0.63
CHD6-209ENST00000482596 RALGAPBQ86X10 1494 aa11.13□□□□□ -0.63
CHD6-209ENST00000482596 NCOA3Q9Y6Q9 1424 aa11.13□□□□□ -0.63
CHD6-209ENST00000482596 CEP152O94986 1710 aa11.12□□□□□ -0.63
CHD6-209ENST00000482596 PTCH1Q13635 1447 aa11.12□□□□□ -0.63
CHD6-209ENST00000482596 SEPT12Q8IYM1 358 aa11.11□□□□□ -0.63
CHD6-209ENST00000482596 MARF1Q9Y4F3 1742 aaKnown RBP11.11□□□□□ -0.63
CHD6-209ENST00000482596 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.1□□□□□ -0.63
CHD6-209ENST00000482596 PITPNM1O00562 1244 aa11.1□□□□□ -0.63
CHD6-209ENST00000482596 PLEKHH2Q8IVE3 1493 aa11.1□□□□□ -0.63
CHD6-209ENST00000482596 MST1RQ04912 1400 aa11.09□□□□□ -0.63
CHD6-209ENST00000482596 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
CHD6-209ENST00000482596 EZH2Q15910 746 aaKnown RBP11.09□□□□□ -0.63
CHD6-209ENST00000482596 BCANQ96GW7 911 aa11.09□□□□□ -0.63
CHD6-209ENST00000482596 RGPD1P0DJD0 1748 aa11.09□□□□□ -0.63
CHD6-209ENST00000482596 EFCAB6Q5THR3 1501 aa11.09□□□□□ -0.63
CHD6-209ENST00000482596 PRELPP51888 382 aa11.08□□□□□ -0.64
CHD6-209ENST00000482596 COL13A1Q5TAT6 717 aaPredicted RBP11.08□□□□□ -0.64
CHD6-209ENST00000482596 TNS1Q9HBL0 1735 aaKnown RBP11.08□□□□□ -0.64
CHD6-209ENST00000482596 FMN1Q68DA7 1419 aa11.08□□□□□ -0.64
CHD6-209ENST00000482596 ZNF644Q9H582 1327 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms