RNA–Protein interactions for RNA: ENST00000482527.1

ABCB1-205, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 4

Gene ABCB1, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-205ENST00000482527 NCBP3Q53F19 620 aaKnown RBP12.34□□□□□ -0.43
ABCB1-205ENST00000482527 ADAMTS8Q9UP79 889 aa12.34□□□□□ -0.43
ABCB1-205ENST00000482527 ZNF608Q9ULD9 1512 aaPredicted RBP12.33□□□□□ -0.44
ABCB1-205ENST00000482527 PLIN1O60240 522 aa12.33□□□□□ -0.44
ABCB1-205ENST00000482527 CC2D1BQ5T0F9 858 aaKnown RBP12.33□□□□□ -0.44
ABCB1-205ENST00000482527 MAST1Q9Y2H9 1570 aa12.33□□□□□ -0.44
ABCB1-205ENST00000482527 PPP2R1AP30153 589 aa12.32□□□□□ -0.44
ABCB1-205ENST00000482527 PMFBP1Q8TBY8 1022 aa12.32□□□□□ -0.44
ABCB1-205ENST00000482527 CHMP7Q8WUX9 453 aaPredicted RBP12.32□□□□□ -0.44
ABCB1-205ENST00000482527 JPH4Q96JJ6 628 aa12.32□□□□□ -0.44
ABCB1-205ENST00000482527 SCAPERQ9BY12 1400 aa12.31□□□□□ -0.44
ABCB1-205ENST00000482527 ISY1Q9ULR0 285 aaKnown RBP12.31□□□□□ -0.44
ABCB1-205ENST00000482527 NKTRP30414 1462 aaKnown RBP12.31□□□□□ -0.44
ABCB1-205ENST00000482527 CDC42BPAQ5VT25 1732 aa12.31□□□□□ -0.44
ABCB1-205ENST00000482527 PLB1Q6P1J6 1458 aa12.3□□□□□ -0.44
ABCB1-205ENST00000482527 GLIPR1L2Q4G1C9 344 aa12.3□□□□□ -0.44
ABCB1-205ENST00000482527 UNC13BO14795 1591 aa12.3□□□□□ -0.44
ABCB1-205ENST00000482527 ABCA8O94911 1581 aa12.3□□□□□ -0.44
ABCB1-205ENST00000482527 ATP10BO94823 1461 aa12.29□□□□□ -0.44
ABCB1-205ENST00000482527 ABCC2Q92887 1545 aa12.29□□□□□ -0.44
ABCB1-205ENST00000482527 BRPF3Q9ULD4 1205 aa12.29□□□□□ -0.44
ABCB1-205ENST00000482527 A2MP01023 1474 aa12.28□□□□□ -0.44
ABCB1-205ENST00000482527 ADRA2BP18089 450 aa12.28□□□□□ -0.44
ABCB1-205ENST00000482527 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
ABCB1-205ENST00000482527 DISP3Q9P2K9 1392 aa12.28□□□□□ -0.44
ABCB1-205ENST00000482527 ASXL1Q8IXJ9 1541 aa12.27□□□□□ -0.44
ABCB1-205ENST00000482527 PTMSP20962 102 aa12.27□□□□□ -0.45
ABCB1-205ENST00000482527 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.45
ABCB1-205ENST00000482527 NBPF1Q3BBV0 1214 aa12.27□□□□□ -0.45
ABCB1-205ENST00000482527 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
ABCB1-205ENST00000482527 SYNMO15061 1565 aa12.26□□□□□ -0.45
ABCB1-205ENST00000482527 EIF5BO60841 1220 aaKnown RBP12.26□□□□□ -0.45
ABCB1-205ENST00000482527 FRAT2O75474 233 aaPredicted RBP12.26□□□□□ -0.45
ABCB1-205ENST00000482527 IQGAP3Q86VI3 1631 aa12.26□□□□□ -0.45
ABCB1-205ENST00000482527 RGL3Q3MIN7 710 aa12.25□□□□□ -0.45
ABCB1-205ENST00000482527 C20orf194Q5TEA3 1177 aa12.25□□□□□ -0.45
ABCB1-205ENST00000482527 DUOX2Q9NRD8 1548 aa12.25□□□□□ -0.45
ABCB1-205ENST00000482527 PLA2R1Q13018 1463 aa12.24□□□□□ -0.45
ABCB1-205ENST00000482527 CLUAP1Q96AJ1 413 aa12.24□□□□□ -0.45
ABCB1-205ENST00000482527 SCAF11Q99590 1463 aaKnown RBP12.24□□□□□ -0.45
ABCB1-205ENST00000482527 RWDD1Q9H446 243 aaPredicted RBP12.24□□□□□ -0.45
ABCB1-205ENST00000482527 PLEKHH1Q9ULM0 1364 aa12.24□□□□□ -0.45
ABCB1-205ENST00000482527 WDR7Q9Y4E6 1490 aa12.24□□□□□ -0.45
ABCB1-205ENST00000482527 PLXNC1O60486 1568 aa12.23□□□□□ -0.45
ABCB1-205ENST00000482527 CT47B1P0C2W7 299 aaPredicted RBP12.23□□□□□ -0.45
ABCB1-205ENST00000482527 RGS3P49796 1198 aa12.23□□□□□ -0.45
ABCB1-205ENST00000482527 CENPJQ9HC77 1338 aaPredicted RBP12.22□□□□□ -0.45
ABCB1-205ENST00000482527 SLC4A3P48751 1232 aa12.22□□□□□ -0.45
ABCB1-205ENST00000482527 WDR63Q8IWG1 891 aa12.22□□□□□ -0.45
ABCB1-205ENST00000482527 CHD1O14646 1710 aa12.22□□□□□ -0.45
ABCB1-205ENST00000482527 RNF17Q9BXT8 1623 aaKnown RBP12.22□□□□□ -0.45
ABCB1-205ENST00000482527 MAGI2Q86UL8 1455 aa12.21□□□□□ -0.45
ABCB1-205ENST00000482527 SENP3-EIF4A1A0A087X0R7 540 aa12.21□□□□□ -0.45
ABCB1-205ENST00000482527 CANXP27824 592 aaKnown RBP12.21□□□□□ -0.45
ABCB1-205ENST00000482527 NEURL4Q96JN8 1562 aa12.21□□□□□ -0.46
ABCB1-205ENST00000482527 PREX2Q70Z35 1606 aa12.2□□□□□ -0.46
ABCB1-205ENST00000482527 GOLGA6L3A6NEY3 463 aa12.2□□□□□ -0.46
ABCB1-205ENST00000482527 POLR3AO14802 1390 aaPredicted RBP12.19□□□□□ -0.46
ABCB1-205ENST00000482527 CCDC27Q2M243 656 aa12.19□□□□□ -0.46
ABCB1-205ENST00000482527 SAMD9LQ8IVG5 1584 aa12.18□□□□□ -0.46
ABCB1-205ENST00000482527 MRE11P49959 708 aa12.18□□□□□ -0.46
ABCB1-205ENST00000482527 TBC1D32Q96NH3 1257 aa12.18□□□□□ -0.46
ABCB1-205ENST00000482527 CHMP5Q9NZZ3 219 aa12.18□□□□□ -0.46
ABCB1-205ENST00000482527 KANK1Q14678 1352 aa12.18□□□□□ -0.46
ABCB1-205ENST00000482527 USP19O94966 1318 aa12.17□□□□□ -0.46
ABCB1-205ENST00000482527 DDX11L8A8MPP1 907 aa12.17□□□□□ -0.46
ABCB1-205ENST00000482527 APAF1O14727 1248 aa12.17□□□□□ -0.46
ABCB1-205ENST00000482527 ANTXR1Q9H6X2 564 aa12.17□□□□□ -0.46
ABCB1-205ENST00000482527 KIAA1210Q9ULL0 1709 aa12.17□□□□□ -0.46
ABCB1-205ENST00000482527 VIRMAQ69YN4 1812 aaKnown RBP12.16□□□□□ -0.46
ABCB1-205ENST00000482527 SKOR2Q2VWA4 1001 aaPredicted RBP12.16□□□□□ -0.46
ABCB1-205ENST00000482527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.46
ABCB1-205ENST00000482527 MYH16Q9H6N6 1097 aa12.16□□□□□ -0.46
ABCB1-205ENST00000482527 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
ABCB1-205ENST00000482527 FSD2A1L4K1 749 aa12.15□□□□□ -0.46
ABCB1-205ENST00000482527 IGHDP01880 384 aa12.15□□□□□ -0.46
ABCB1-205ENST00000482527 CLCN1P35523 988 aa12.15□□□□□ -0.46
ABCB1-205ENST00000482527 RUNDC1Q96C34 613 aa12.15□□□□□ -0.46
ABCB1-205ENST00000482527 PUS7Q96PZ0 661 aaKnown RBP12.15□□□□□ -0.46
ABCB1-205ENST00000482527 CHMP4BQ9H444 224 aaKnown RBP12.15□□□□□ -0.46
ABCB1-205ENST00000482527 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.15□□□□□ -0.46
ABCB1-205ENST00000482527 RTEL1-TNFRSF6BF6WH68 1400 aa12.14□□□□□ -0.47
ABCB1-205ENST00000482527 PTPRTO14522 1441 aa12.14□□□□□ -0.47
ABCB1-205ENST00000482527 MCM4P33991 863 aa12.14□□□□□ -0.47
ABCB1-205ENST00000482527 EFCAB2Q5VUJ9 269 aa12.14□□□□□ -0.47
ABCB1-205ENST00000482527 WWC1Q8IX03 1113 aa12.14□□□□□ -0.47
ABCB1-205ENST00000482527 CFAP53Q96M91 514 aa12.14□□□□□ -0.47
ABCB1-205ENST00000482527 CFAP44Q96MT7 982 aa12.14□□□□□ -0.47
ABCB1-205ENST00000482527 CIZ1Q9ULV3 898 aaPredicted RBP12.14□□□□□ -0.47
ABCB1-205ENST00000482527 SBNO2Q9Y2G9 1366 aa12.14□□□□□ -0.47
ABCB1-205ENST00000482527 MYO5CQ9NQX4 1742 aa12.14□□□□□ -0.47
ABCB1-205ENST00000482527 TTC37Q6PGP7 1564 aa12.13□□□□□ -0.47
ABCB1-205ENST00000482527 ARHGAP5Q13017 1502 aa12.13□□□□□ -0.47
ABCB1-205ENST00000482527 BCAR3O75815 825 aa12.13□□□□□ -0.47
ABCB1-205ENST00000482527 PNNQ9H307 717 aaKnown RBP12.13□□□□□ -0.47
ABCB1-205ENST00000482527 MADDQ8WXG6 1647 aa12.12□□□□□ -0.47
ABCB1-205ENST00000482527 CDC42BPBQ9Y5S2 1711 aa12.12□□□□□ -0.47
ABCB1-205ENST00000482527 RRP9O43818 475 aaKnown RBP12.12□□□□□ -0.47
ABCB1-205ENST00000482527 KCNA4P22459 653 aa12.12□□□□□ -0.47
ABCB1-205ENST00000482527 PPP6R1Q9UPN7 881 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms