RNA–Protein interactions for RNA: ENST00000482527.1

ABCB1-205, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 4

Gene ABCB1, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-205ENST00000482527 NISCHQ9Y2I1 1504 aa18.64■□□□□ 0.58
ABCB1-205ENST00000482527 HRCP23327 699 aa15.89■□□□□ 0.13
ABCB1-205ENST00000482527 ZCCHC6Q5VYS8 1495 aaKnown RBP15.83■□□□□ 0.12
ABCB1-205ENST00000482527 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
ABCB1-205ENST00000482527 SUPT5HO00267 1087 aaKnown RBP15.8■□□□□ 0.12
ABCB1-205ENST00000482527 CHIC1Q5VXU3 224 aa15.8■□□□□ 0.12
ABCB1-205ENST00000482527 CCDC180Q9P1Z9 1646 aa15.78■□□□□ 0.12
ABCB1-205ENST00000482527 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
ABCB1-205ENST00000482527 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
ABCB1-205ENST00000482527 PCGF6Q9BYE7 350 aa15.46■□□□□ 0.07
ABCB1-205ENST00000482527 PELP1Q8IZL8 1130 aaKnown RBP15.44■□□□□ 0.06
ABCB1-205ENST00000482527 MYO15BQ96JP2 1530 aa15.43■□□□□ 0.06
ABCB1-205ENST00000482527 ZEB1P37275 1124 aaPredicted RBP15.43■□□□□ 0.06
ABCB1-205ENST00000482527 TRIM26Q12899 539 aaPredicted RBP15.35■□□□□ 0.05
ABCB1-205ENST00000482527 ABCC9O60706 1549 aa15.29■□□□□ 0.04
ABCB1-205ENST00000482527 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
ABCB1-205ENST00000482527 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
ABCB1-205ENST00000482527 PPARGC1BQ86YN6 1023 aaKnown RBP15.12■□□□□ 0.01
ABCB1-205ENST00000482527 LOC105371045A0A1W2PR82 267 aa15.05■□□□□ -0
ABCB1-205ENST00000482527 MYT1Q01538 1121 aa14.96□□□□□ -0.01
ABCB1-205ENST00000482527 TRIM41Q8WV44 630 aa14.9□□□□□ -0.02
ABCB1-205ENST00000482527 RSF1Q96T23 1441 aaPredicted RBP14.85□□□□□ -0.03
ABCB1-205ENST00000482527 RB1CC1Q8TDY2 1594 aa14.83□□□□□ -0.04
ABCB1-205ENST00000482527 SCAF1Q9H7N4 1312 aaKnown RBP14.68□□□□□ -0.06
ABCB1-205ENST00000482527 CENPBP07199 599 aaPredicted RBP14.68□□□□□ -0.06
ABCB1-205ENST00000482527 ACIN1Q9UKV3 1341 aaKnown RBP14.64□□□□□ -0.07
ABCB1-205ENST00000482527 NACADO15069 1562 aa14.56□□□□□ -0.08
ABCB1-205ENST00000482527 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
ABCB1-205ENST00000482527 CCER1Q8TC90 406 aaPredicted RBP14.55□□□□□ -0.08
ABCB1-205ENST00000482527 FAM9AQ8IZU1 332 aaPredicted RBP14.52□□□□□ -0.09
ABCB1-205ENST00000482527 WRNQ14191 1432 aaPredicted RBP eCLIP14.51□□□□□ -0.09
ABCB1-205ENST00000482527 DIEXFQ68CQ4 756 aaKnown RBP14.48□□□□□ -0.09
ABCB1-205ENST00000482527 DNAJC5Q9H3Z4 198 aa14.48□□□□□ -0.09
ABCB1-205ENST00000482527 EEA1Q15075 1411 aa14.44□□□□□ -0.1
ABCB1-205ENST00000482527 NEUROD1Q13562 356 aa14.39□□□□□ -0.11
ABCB1-205ENST00000482527 BAZ1AQ9NRL2 1556 aaPredicted RBP14.38□□□□□ -0.11
ABCB1-205ENST00000482527 MROH2BQ7Z745 1585 aa14.37□□□□□ -0.11
ABCB1-205ENST00000482527 TNIKQ9UKE5 1360 aa14.36□□□□□ -0.11
ABCB1-205ENST00000482527 ZNF316A6NFI3 1004 aaPredicted RBP14.36□□□□□ -0.11
ABCB1-205ENST00000482527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
ABCB1-205ENST00000482527 GTF3C3Q9Y5Q9 886 aa14.36□□□□□ -0.11
ABCB1-205ENST00000482527 CLSPNQ9HAW4 1339 aa14.33□□□□□ -0.12
ABCB1-205ENST00000482527 CECR2Q9BXF3 1484 aa14.32□□□□□ -0.12
ABCB1-205ENST00000482527 EIF4G1Q04637 1599 aaKnown RBP14.29□□□□□ -0.12
ABCB1-205ENST00000482527 WIZO95785 1651 aa14.26□□□□□ -0.13
ABCB1-205ENST00000482527 CEP162Q5TB80 1403 aa14.25□□□□□ -0.13
ABCB1-205ENST00000482527 TOP2AP11388 1531 aaKnown RBP14.25□□□□□ -0.13
ABCB1-205ENST00000482527 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
ABCB1-205ENST00000482527 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
ABCB1-205ENST00000482527 GOLGA3Q08378 1498 aa14.18□□□□□ -0.14
ABCB1-205ENST00000482527 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
ABCB1-205ENST00000482527 UBTFP17480 764 aaKnown RBP14.12□□□□□ -0.15
ABCB1-205ENST00000482527 CEP164Q9UPV0 1460 aa14.08□□□□□ -0.16
ABCB1-205ENST00000482527 APLP2Q06481 763 aa14.08□□□□□ -0.16
ABCB1-205ENST00000482527 SMARCA2P51531 1590 aa14.08□□□□□ -0.16
ABCB1-205ENST00000482527 SMARCA4P51532 1647 aa14.07□□□□□ -0.16
ABCB1-205ENST00000482527 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
ABCB1-205ENST00000482527 SOGA1O94964 1423 aa14.04□□□□□ -0.16
ABCB1-205ENST00000482527 BAZ1BQ9UIG0 1483 aaKnown RBP14.04□□□□□ -0.16
ABCB1-205ENST00000482527 KIF21BO75037 1637 aa14.02□□□□□ -0.16
ABCB1-205ENST00000482527 ABCC8Q09428 1581 aa14.01□□□□□ -0.17
ABCB1-205ENST00000482527 TTBK1Q5TCY1 1321 aaPredicted RBP14□□□□□ -0.17
ABCB1-205ENST00000482527 MIER1Q8N108 512 aa14□□□□□ -0.17
ABCB1-205ENST00000482527 UNC13AQ9UPW8 1703 aa14□□□□□ -0.17
ABCB1-205ENST00000482527 PHF23Q9BUL5 403 aaPredicted RBP13.99□□□□□ -0.17
ABCB1-205ENST00000482527 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
ABCB1-205ENST00000482527 CLIP1P30622 1438 aa13.97□□□□□ -0.17
ABCB1-205ENST00000482527 YTHDC1Q96MU7 727 aaKnown RBP13.92□□□□□ -0.18
ABCB1-205ENST00000482527 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
ABCB1-205ENST00000482527 BICRAQ9NZM4 1560 aa13.92□□□□□ -0.18
ABCB1-205ENST00000482527 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
ABCB1-205ENST00000482527 RUSC2Q8N2Y8 1516 aa13.86□□□□□ -0.19
ABCB1-205ENST00000482527 CC2D2AQ9P2K1 1620 aa13.82□□□□□ -0.2
ABCB1-205ENST00000482527 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
ABCB1-205ENST00000482527 SUPT16HQ9Y5B9 1047 aaKnown RBP13.78□□□□□ -0.2
ABCB1-205ENST00000482527 DHX57Q6P158 1386 aaKnown RBP13.78□□□□□ -0.2
ABCB1-205ENST00000482527 CUX2O14529 1486 aa13.77□□□□□ -0.21
ABCB1-205ENST00000482527 TIMELESSQ9UNS1 1208 aa13.76□□□□□ -0.21
ABCB1-205ENST00000482527 RRBP1Q9P2E9 1410 aaKnown RBP13.74□□□□□ -0.21
ABCB1-205ENST00000482527 SYNJ1O43426 1573 aa13.73□□□□□ -0.21
ABCB1-205ENST00000482527 ANP32EQ9BTT0 268 aa13.71□□□□□ -0.21
ABCB1-205ENST00000482527 RAPGEF2Q9Y4G8 1499 aa13.7□□□□□ -0.22
ABCB1-205ENST00000482527 TOP2BQ02880 1626 aa13.69□□□□□ -0.22
ABCB1-205ENST00000482527 PRXQ9BXM0 1461 aa13.68□□□□□ -0.22
ABCB1-205ENST00000482527 ATAD2BQ9ULI0 1458 aa13.67□□□□□ -0.22
ABCB1-205ENST00000482527 MAP3K1Q13233 1512 aa13.65□□□□□ -0.22
ABCB1-205ENST00000482527 CCNB3Q8WWL7 1395 aa13.64□□□□□ -0.23
ABCB1-205ENST00000482527 TSHZ2Q9NRE2 1034 aa13.63□□□□□ -0.23
ABCB1-205ENST00000482527 BIVM-ERCC5R4GMW8 1640 aa13.63□□□□□ -0.23
ABCB1-205ENST00000482527 CCER2I3L3R5 266 aa13.61□□□□□ -0.23
ABCB1-205ENST00000482527 NEFLP07196 543 aa13.61□□□□□ -0.23
ABCB1-205ENST00000482527 KIF27Q86VH2 1401 aa13.61□□□□□ -0.23
ABCB1-205ENST00000482527 ARAP1Q96P48 1450 aa13.61□□□□□ -0.23
ABCB1-205ENST00000482527 SETD5Q9C0A6 1442 aa13.54□□□□□ -0.24
ABCB1-205ENST00000482527 KANK4Q5T7N3 995 aaPredicted RBP13.52□□□□□ -0.25
ABCB1-205ENST00000482527 MYT1LQ9UL68 1186 aa13.52□□□□□ -0.25
ABCB1-205ENST00000482527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.51□□□□□ -0.25
ABCB1-205ENST00000482527 ERICH6BQ5W0A0 696 aa13.51□□□□□ -0.25
ABCB1-205ENST00000482527 ANP32CO43423 234 aa13.49□□□□□ -0.25
ABCB1-205ENST00000482527 RAB3GAP2Q9H2M9 1393 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms