RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 NRXN3Q9Y4C0 1643 aa12.99□□□□□ -0.33
NUDCD3-208ENST00000480209 SLIT1O75093 1534 aa12.98□□□□□ -0.33
NUDCD3-208ENST00000480209 ARHGAP23Q9P227 1491 aa12.98□□□□□ -0.33
NUDCD3-208ENST00000480209 NRXN1Q9ULB1 1477 aa12.98□□□□□ -0.33
NUDCD3-208ENST00000480209 RGL3Q3MIN7 710 aa12.98□□□□□ -0.33
NUDCD3-208ENST00000480209 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
NUDCD3-208ENST00000480209 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
NUDCD3-208ENST00000480209 UHRF1BP1Q6BDS2 1440 aa12.96□□□□□ -0.33
NUDCD3-208ENST00000480209 PRAG1Q86YV5 1406 aa12.96□□□□□ -0.33
NUDCD3-208ENST00000480209 KIAA1210Q9ULL0 1709 aa12.96□□□□□ -0.33
NUDCD3-208ENST00000480209 RIMS2Q9UQ26 1411 aa12.96□□□□□ -0.34
NUDCD3-208ENST00000480209 ASXL1Q8IXJ9 1541 aa12.94□□□□□ -0.34
NUDCD3-208ENST00000480209 NBPF8Q3BBV2 869 aa12.94□□□□□ -0.34
NUDCD3-208ENST00000480209 DCAF11Q8TEB1 546 aa12.94□□□□□ -0.34
NUDCD3-208ENST00000480209 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
NUDCD3-208ENST00000480209 LAMC1P11047 1609 aa12.94□□□□□ -0.34
NUDCD3-208ENST00000480209 PIK3C2GO75747 1445 aa12.94□□□□□ -0.34
NUDCD3-208ENST00000480209 TMEM2Q9UHN6 1383 aa12.94□□□□□ -0.34
NUDCD3-208ENST00000480209 RALGAPBQ86X10 1494 aa12.93□□□□□ -0.34
NUDCD3-208ENST00000480209 PPP1R15AO75807 674 aaPredicted RBP12.93□□□□□ -0.34
NUDCD3-208ENST00000480209 ZEB1P37275 1124 aaPredicted RBP12.93□□□□□ -0.34
NUDCD3-208ENST00000480209 ZNF326Q5BKZ1 582 aaKnown RBP12.93□□□□□ -0.34
NUDCD3-208ENST00000480209 SETBP1Q9Y6X0 1596 aa12.93□□□□□ -0.34
NUDCD3-208ENST00000480209 ADGRF5Q8IZF2 1346 aa12.92□□□□□ -0.34
NUDCD3-208ENST00000480209 KDM2AQ9Y2K7 1162 aa12.92□□□□□ -0.34
NUDCD3-208ENST00000480209 STRCQ7RTU9 1775 aa12.92□□□□□ -0.34
NUDCD3-208ENST00000480209 NUTM2DQ5VT03 806 aaPredicted RBP12.91□□□□□ -0.34
NUDCD3-208ENST00000480209 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
NUDCD3-208ENST00000480209 RPGRIP1LQ68CZ1 1315 aa12.9□□□□□ -0.34
NUDCD3-208ENST00000480209 ALKQ9UM73 1620 aa12.9□□□□□ -0.34
NUDCD3-208ENST00000480209 SCAF11Q99590 1463 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-208ENST00000480209 ADGRB1O14514 1584 aa12.89□□□□□ -0.35
NUDCD3-208ENST00000480209 LTKP29376 864 aa12.88□□□□□ -0.35
NUDCD3-208ENST00000480209 ARHGEF28Q8N1W1 1705 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-208ENST00000480209 THEMISQ8N1K5 641 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-208ENST00000480209 ADAMTS13Q76LX8 1427 aa12.86□□□□□ -0.35
NUDCD3-208ENST00000480209 DIP2AQ14689 1571 aa12.86□□□□□ -0.35
NUDCD3-208ENST00000480209 PLEKHG1Q9ULL1 1385 aa12.85□□□□□ -0.35
NUDCD3-208ENST00000480209 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
NUDCD3-208ENST00000480209 MED14O60244 1454 aa12.85□□□□□ -0.35
NUDCD3-208ENST00000480209 GPRASP1Q5JY77 1395 aa12.84□□□□□ -0.35
NUDCD3-208ENST00000480209 HSPA2P54652 639 aa12.84□□□□□ -0.35
NUDCD3-208ENST00000480209 NBPF1Q3BBV0 1214 aa12.83□□□□□ -0.36
NUDCD3-208ENST00000480209 XRN1Q8IZH2 1706 aaKnown RBP12.82□□□□□ -0.36
NUDCD3-208ENST00000480209 VGFO15240 615 aaPredicted RBP12.82□□□□□ -0.36
NUDCD3-208ENST00000480209 CFAP70Q5T0N1 1121 aa12.82□□□□□ -0.36
NUDCD3-208ENST00000480209 TXNDC2Q86VQ3 553 aa12.82□□□□□ -0.36
NUDCD3-208ENST00000480209 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.82□□□□□ -0.36
NUDCD3-208ENST00000480209 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
NUDCD3-208ENST00000480209 ROCK2O75116 1388 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-208ENST00000480209 CHD2O14647 1828 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-208ENST00000480209 NCKAP5LQ9HCH0 1330 aa12.81□□□□□ -0.36
NUDCD3-208ENST00000480209 STRCP1A6NGW2 1772 aa12.81□□□□□ -0.36
NUDCD3-208ENST00000480209 NPHP4O75161 1426 aaPredicted RBP12.8□□□□□ -0.36
NUDCD3-208ENST00000480209 QRICH2Q9H0J4 1663 aa12.8□□□□□ -0.36
NUDCD3-208ENST00000480209 C14orf93Q9H972 538 aaKnown RBP12.8□□□□□ -0.36
NUDCD3-208ENST00000480209 METP08581 1390 aa12.8□□□□□ -0.36
NUDCD3-208ENST00000480209 CPS1P31327 1500 aa12.79□□□□□ -0.36
NUDCD3-208ENST00000480209 NWD1Q149M9 1564 aa12.79□□□□□ -0.36
NUDCD3-208ENST00000480209 EID1Q9Y6B2 187 aa12.79□□□□□ -0.36
NUDCD3-208ENST00000480209 PTPRUQ92729 1446 aa12.79□□□□□ -0.36
NUDCD3-208ENST00000480209 TMEM132EQ6IEE7 984 aa12.77□□□□□ -0.37
NUDCD3-208ENST00000480209 ANKLE2Q86XL3 938 aa12.77□□□□□ -0.37
NUDCD3-208ENST00000480209 USP47Q96K76 1375 aa12.77□□□□□ -0.37
NUDCD3-208ENST00000480209 YTHDC2Q9H6S0 1430 aaKnown RBP12.77□□□□□ -0.37
NUDCD3-208ENST00000480209 SLC26A8Q96RN1 970 aa12.76□□□□□ -0.37
NUDCD3-208ENST00000480209 HDGFP51858 240 aaKnown RBP12.75□□□□□ -0.37
NUDCD3-208ENST00000480209 DLC1Q96QB1 1528 aa12.75□□□□□ -0.37
NUDCD3-208ENST00000480209 CARD11Q9BXL7 1154 aa12.75□□□□□ -0.37
NUDCD3-208ENST00000480209 TECPR2O15040 1411 aa12.74□□□□□ -0.37
NUDCD3-208ENST00000480209 KCNA4P22459 653 aa12.74□□□□□ -0.37
NUDCD3-208ENST00000480209 LRPPRCP42704 1394 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-208ENST00000480209 XIRP1Q702N8 1843 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-208ENST00000480209 NALCNQ8IZF0 1738 aa12.73□□□□□ -0.37
NUDCD3-208ENST00000480209 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-208ENST00000480209 HSPA5P11021 654 aaKnown RBP12.72□□□□□ -0.37
NUDCD3-208ENST00000480209 BCANQ96GW7 911 aa12.72□□□□□ -0.37
NUDCD3-208ENST00000480209 HIRIP3Q9BW71 556 aaPredicted RBP12.71□□□□□ -0.37
NUDCD3-208ENST00000480209 TBX22Q9Y458 520 aa12.71□□□□□ -0.37
NUDCD3-208ENST00000480209 PTCH1Q13635 1447 aa12.71□□□□□ -0.38
NUDCD3-208ENST00000480209 PIK3R4Q99570 1358 aa12.7□□□□□ -0.38
NUDCD3-208ENST00000480209 PLEKHH1Q9ULM0 1364 aa12.7□□□□□ -0.38
NUDCD3-208ENST00000480209 TRAK1Q9UPV9 953 aa12.7□□□□□ -0.38
NUDCD3-208ENST00000480209 TULP4Q9NRJ4 1543 aa12.7□□□□□ -0.38
NUDCD3-208ENST00000480209 ABCC11Q96J66 1382 aa12.69□□□□□ -0.38
NUDCD3-208ENST00000480209 ROBO2Q9HCK4 1378 aa12.69□□□□□ -0.38
NUDCD3-208ENST00000480209 STK26Q9P289 416 aa12.69□□□□□ -0.38
NUDCD3-208ENST00000480209 MYOM1P52179 1685 aa12.69□□□□□ -0.38
NUDCD3-208ENST00000480209 ADGRB2O60241 1585 aa12.69□□□□□ -0.38
NUDCD3-208ENST00000480209 EIF4G2P78344 907 aaKnown RBP eCLIP12.68□□□□□ -0.38
NUDCD3-208ENST00000480209 EIF3AQ14152 1382 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-208ENST00000480209 NKTRP30414 1462 aaKnown RBP12.67□□□□□ -0.38
NUDCD3-208ENST00000480209 ST20-MTHFSA0A0A6YYL1 179 aa12.67□□□□□ -0.38
NUDCD3-208ENST00000480209 FAM135BQ49AJ0 1406 aa12.67□□□□□ -0.38
NUDCD3-208ENST00000480209 TESK2Q96S53 571 aa12.66□□□□□ -0.38
NUDCD3-208ENST00000480209 DISP3Q9P2K9 1392 aa12.66□□□□□ -0.38
NUDCD3-208ENST00000480209 KCNA6P17658 529 aa12.65□□□□□ -0.38
NUDCD3-208ENST00000480209 AMOTL2Q9Y2J4 779 aa12.65□□□□□ -0.38
NUDCD3-208ENST00000480209 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
NUDCD3-208ENST00000480209 CENPJQ9HC77 1338 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms