RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 ZEB1P37275 1124 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC12-219ENST00000479955 DCAF11Q8TEB1 546 aa16.9■□□□□ 0.3
TRAPPC12-219ENST00000479955 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
TRAPPC12-219ENST00000479955 MYO5BQ9ULV0 1848 aa16.9■□□□□ 0.3
TRAPPC12-219ENST00000479955 SLIT1O75093 1534 aa16.88■□□□□ 0.29
TRAPPC12-219ENST00000479955 ANKLE2Q86XL3 938 aa16.88■□□□□ 0.29
TRAPPC12-219ENST00000479955 RIMS2Q9UQ26 1411 aa16.87■□□□□ 0.29
TRAPPC12-219ENST00000479955 PPP1R15AO75807 674 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC12-219ENST00000479955 TXNDC2Q86VQ3 553 aa16.87■□□□□ 0.29
TRAPPC12-219ENST00000479955 ZFYVE9O95405 1425 aa16.87■□□□□ 0.29
TRAPPC12-219ENST00000479955 ARHGAP23Q9P227 1491 aa16.86■□□□□ 0.29
TRAPPC12-219ENST00000479955 KDM2AQ9Y2K7 1162 aa16.86■□□□□ 0.29
TRAPPC12-219ENST00000479955 LMTK3Q96Q04 1460 aa16.86■□□□□ 0.29
TRAPPC12-219ENST00000479955 PPLO60437 1756 aa16.85■□□□□ 0.29
TRAPPC12-219ENST00000479955 NEXMIFQ5QGS0 1516 aa16.85■□□□□ 0.29
TRAPPC12-219ENST00000479955 MYOM2P54296 1465 aa16.84■□□□□ 0.29
TRAPPC12-219ENST00000479955 IFT172Q9UG01 1749 aa16.84■□□□□ 0.29
TRAPPC12-219ENST00000479955 SCAF11Q99590 1463 aaKnown RBP16.82■□□□□ 0.28
TRAPPC12-219ENST00000479955 LTKP29376 864 aa16.81■□□□□ 0.28
TRAPPC12-219ENST00000479955 HSPA2P54652 639 aa16.8■□□□□ 0.28
TRAPPC12-219ENST00000479955 NUTM2DQ5VT03 806 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC12-219ENST00000479955 BCANQ96GW7 911 aa16.8■□□□□ 0.28
TRAPPC12-219ENST00000479955 PLEKHG1Q9ULL1 1385 aa16.79■□□□□ 0.28
TRAPPC12-219ENST00000479955 ADGRF5Q8IZF2 1346 aa16.78■□□□□ 0.28
TRAPPC12-219ENST00000479955 NRXN1Q9ULB1 1477 aa16.78■□□□□ 0.28
TRAPPC12-219ENST00000479955 POLR1AO95602 1720 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC12-219ENST00000479955 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.28
TRAPPC12-219ENST00000479955 NCKAP5LQ9HCH0 1330 aa16.76■□□□□ 0.27
TRAPPC12-219ENST00000479955 MED14O60244 1454 aa16.76■□□□□ 0.27
TRAPPC12-219ENST00000479955 PIK3C2GO75747 1445 aa16.76■□□□□ 0.27
TRAPPC12-219ENST00000479955 PRAG1Q86YV5 1406 aa16.76■□□□□ 0.27
TRAPPC12-219ENST00000479955 C14orf93Q9H972 538 aaKnown RBP16.75■□□□□ 0.27
TRAPPC12-219ENST00000479955 SETBP1Q9Y6X0 1596 aa16.74■□□□□ 0.27
TRAPPC12-219ENST00000479955 NPHP4O75161 1426 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC12-219ENST00000479955 TBX22Q9Y458 520 aa16.74■□□□□ 0.27
TRAPPC12-219ENST00000479955 LAMC1P11047 1609 aa16.74■□□□□ 0.27
TRAPPC12-219ENST00000479955 KIAA1210Q9ULL0 1709 aa16.73■□□□□ 0.27
TRAPPC12-219ENST00000479955 IQGAP1P46940 1657 aa16.72■□□□□ 0.27
TRAPPC12-219ENST00000479955 NBPF8Q3BBV2 869 aa16.71■□□□□ 0.27
TRAPPC12-219ENST00000479955 CFAP70Q5T0N1 1121 aa16.71■□□□□ 0.27
TRAPPC12-219ENST00000479955 DIP2AQ14689 1571 aa16.71■□□□□ 0.27
TRAPPC12-219ENST00000479955 STRCQ7RTU9 1775 aa16.7■□□□□ 0.26
TRAPPC12-219ENST00000479955 ALKQ9UM73 1620 aa16.7■□□□□ 0.26
TRAPPC12-219ENST00000479955 SLC26A8Q96RN1 970 aa16.69■□□□□ 0.26
TRAPPC12-219ENST00000479955 PIK3R4Q99570 1358 aa16.68■□□□□ 0.26
TRAPPC12-219ENST00000479955 ADAMTS13Q76LX8 1427 aa16.68■□□□□ 0.26
TRAPPC12-219ENST00000479955 TRPM1Q7Z4N2 1603 aa16.67■□□□□ 0.26
TRAPPC12-219ENST00000479955 NRXN3Q9Y4C0 1643 aa16.67■□□□□ 0.26
TRAPPC12-219ENST00000479955 ROCK2O75116 1388 aaKnown RBP16.67■□□□□ 0.26
TRAPPC12-219ENST00000479955 SENP3Q9H4L4 574 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC12-219ENST00000479955 RALGAPBQ86X10 1494 aa16.67■□□□□ 0.26
TRAPPC12-219ENST00000479955 CARD11Q9BXL7 1154 aa16.65■□□□□ 0.26
TRAPPC12-219ENST00000479955 NBPF1Q3BBV0 1214 aa16.64■□□□□ 0.25
TRAPPC12-219ENST00000479955 GPRASP1Q5JY77 1395 aa16.64■□□□□ 0.25
TRAPPC12-219ENST00000479955 TMEM132EQ6IEE7 984 aa16.63■□□□□ 0.25
TRAPPC12-219ENST00000479955 METP08581 1390 aa16.63■□□□□ 0.25
TRAPPC12-219ENST00000479955 SETD1AO15047 1707 aaKnown RBP16.62■□□□□ 0.25
TRAPPC12-219ENST00000479955 ADGRB1O14514 1584 aa16.61■□□□□ 0.25
TRAPPC12-219ENST00000479955 KCNA6P17658 529 aa16.61■□□□□ 0.25
TRAPPC12-219ENST00000479955 SIRT1Q96EB6 747 aa16.61■□□□□ 0.25
TRAPPC12-219ENST00000479955 LRPPRCP42704 1394 aaKnown RBP16.61■□□□□ 0.25
TRAPPC12-219ENST00000479955 YTHDC2Q9H6S0 1430 aaKnown RBP16.61■□□□□ 0.25
TRAPPC12-219ENST00000479955 AMOTL2Q9Y2J4 779 aa16.6■□□□□ 0.25
TRAPPC12-219ENST00000479955 ABCC11Q96J66 1382 aa16.6■□□□□ 0.25
TRAPPC12-219ENST00000479955 STK26Q9P289 416 aa16.59■□□□□ 0.25
TRAPPC12-219ENST00000479955 EIF3AQ14152 1382 aaKnown RBP16.59■□□□□ 0.25
TRAPPC12-219ENST00000479955 CHD2O14647 1828 aaKnown RBP16.59■□□□□ 0.25
TRAPPC12-219ENST00000479955 SLC24A1O60721 1099 aa16.57■□□□□ 0.24
TRAPPC12-219ENST00000479955 EIF4G2P78344 907 aaKnown RBP eCLIP16.57■□□□□ 0.242e-9■■■□□ 17.1
TRAPPC12-219ENST00000479955 TRAK1Q9UPV9 953 aa16.57■□□□□ 0.24
TRAPPC12-219ENST00000479955 ASXL1Q8IXJ9 1541 aa16.56■□□□□ 0.24
TRAPPC12-219ENST00000479955 TECPR2O15040 1411 aa16.56■□□□□ 0.24
TRAPPC12-219ENST00000479955 POGKQ9P215 609 aa16.55■□□□□ 0.24
TRAPPC12-219ENST00000479955 KNDC1Q76NI1 1749 aa16.55■□□□□ 0.24
TRAPPC12-219ENST00000479955 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
TRAPPC12-219ENST00000479955 PTPRUQ92729 1446 aa16.54■□□□□ 0.24
TRAPPC12-219ENST00000479955 FAM135BQ49AJ0 1406 aa16.53■□□□□ 0.24
TRAPPC12-219ENST00000479955 USP47Q96K76 1375 aa16.53■□□□□ 0.24
TRAPPC12-219ENST00000479955 NWD1Q149M9 1564 aa16.53■□□□□ 0.24
TRAPPC12-219ENST00000479955 NKTRP30414 1462 aaKnown RBP16.53■□□□□ 0.24
TRAPPC12-219ENST00000479955 XRN1Q8IZH2 1706 aaKnown RBP16.53■□□□□ 0.24
TRAPPC12-219ENST00000479955 PTCH1Q13635 1447 aa16.53■□□□□ 0.24
TRAPPC12-219ENST00000479955 CENPJQ9HC77 1338 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC12-219ENST00000479955 CPS1P31327 1500 aa16.51■□□□□ 0.23
TRAPPC12-219ENST00000479955 PROSER2Q86WR7 435 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC12-219ENST00000479955 PRAM1Q96QH2 718 aa16.51■□□□□ 0.23
TRAPPC12-219ENST00000479955 ARHGEF28Q8N1W1 1705 aaKnown RBP16.5■□□□□ 0.23
TRAPPC12-219ENST00000479955 ZNF335Q9H4Z2 1342 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC12-219ENST00000479955 ST20-MTHFSA0A0A6YYL1 179 aa16.49■□□□□ 0.23
TRAPPC12-219ENST00000479955 NCOA3Q9Y6Q9 1424 aa16.49■□□□□ 0.23
TRAPPC12-219ENST00000479955 ROBO2Q9HCK4 1378 aa16.49■□□□□ 0.23
TRAPPC12-219ENST00000479955 HSPA5P11021 654 aaKnown RBP16.48■□□□□ 0.23
TRAPPC12-219ENST00000479955 WAPLQ7Z5K2 1190 aa16.48■□□□□ 0.23
TRAPPC12-219ENST00000479955 C14orf37Q86TY3 774 aa16.46■□□□□ 0.23
TRAPPC12-219ENST00000479955 SBNO2Q9Y2G9 1366 aa16.46■□□□□ 0.23
TRAPPC12-219ENST00000479955 STRCP1A6NGW2 1772 aa16.45■□□□□ 0.22
TRAPPC12-219ENST00000479955 TMF1P82094 1093 aa16.44■□□□□ 0.22
TRAPPC12-219ENST00000479955 SAFB2Q14151 953 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAPPC12-219ENST00000479955 CDCA8Q53HL2 280 aa16.44■□□□□ 0.22
TRAPPC12-219ENST00000479955 QRICH2Q9H0J4 1663 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 657.7 ms