RNA–Protein interactions for RNA: ENST00000479353.5

PTGER3-210, Transcript of prostaglandin E receptor 3, humanhuman

TSL 1 (best)

Gene PTGER3, Length 1,895 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER3-210ENST00000479353 CLTCQ00610 1675 aaKnown RBP28.89■■■□□ 2.22
PTGER3-210ENST00000479353 SCAF11Q99590 1463 aaKnown RBP28.87■■■□□ 2.21
PTGER3-210ENST00000479353 MYO5BQ9ULV0 1848 aa28.87■■■□□ 2.21
PTGER3-210ENST00000479353 POLR3GLQ9BT43 218 aa28.86■■■□□ 2.21
PTGER3-210ENST00000479353 PRKRIP1Q9H875 184 aaPredicted RBP28.85■■■□□ 2.21
PTGER3-210ENST00000479353 SCAF1Q9H7N4 1312 aaKnown RBP28.84■■■□□ 2.21
PTGER3-210ENST00000479353 NEXMIFQ5QGS0 1516 aa28.84■■■□□ 2.21
PTGER3-210ENST00000479353 DISP3Q9P2K9 1392 aa28.83■■■□□ 2.21
PTGER3-210ENST00000479353 CHGAP10645 457 aaKnown RBP28.83■■■□□ 2.21
PTGER3-210ENST00000479353 ERVK-7P63135 1459 aa28.82■■■□□ 2.2
PTGER3-210ENST00000479353 PPP6R1Q9UPN7 881 aa28.82■■■□□ 2.2
PTGER3-210ENST00000479353 PIK3C2GO75747 1445 aa28.81■■■□□ 2.2
PTGER3-210ENST00000479353 TMEM131LA2VDJ0 1609 aa28.81■■■□□ 2.2
PTGER3-210ENST00000479353 SETBP1Q9Y6X0 1596 aa28.8■■■□□ 2.2
PTGER3-210ENST00000479353 CFAP70Q5T0N1 1121 aa28.8■■■□□ 2.2
PTGER3-210ENST00000479353 RPGRIP1LQ68CZ1 1315 aa28.8■■■□□ 2.2
PTGER3-210ENST00000479353 IDI1Q13907 227 aa28.78■■■□□ 2.2
PTGER3-210ENST00000479353 SLC52A1Q9NWF4 448 aa28.76■■■□□ 2.2
PTGER3-210ENST00000479353 SPATA31D1Q6ZQQ2 1576 aa28.75■■■□□ 2.19
PTGER3-210ENST00000479353 FBXO31Q5XUX0 539 aaPredicted RBP28.74■■■□□ 2.19
PTGER3-210ENST00000479353 MYO3AQ8NEV4 1616 aa28.74■■■□□ 2.19
PTGER3-210ENST00000479353 ADGRB1O14514 1584 aa28.73■■■□□ 2.19
PTGER3-210ENST00000479353 CCDC184Q52MB2 194 aa28.71■■■□□ 2.19
PTGER3-210ENST00000479353 TMF1P82094 1093 aa28.7■■■□□ 2.19
PTGER3-210ENST00000479353 EIF3AQ14152 1382 aaKnown RBP28.7■■■□□ 2.19
PTGER3-210ENST00000479353 MLECQ14165 292 aa28.7■■■□□ 2.18
PTGER3-210ENST00000479353 C14orf93Q9H972 538 aaKnown RBP28.68■■■□□ 2.18
PTGER3-210ENST00000479353 ZFYVE9O95405 1425 aa28.67■■■□□ 2.18
PTGER3-210ENST00000479353 MYOM1P52179 1685 aa28.64■■■□□ 2.18
PTGER3-210ENST00000479353 GTF3C3Q9Y5Q9 886 aa28.62■■■□□ 2.17
PTGER3-210ENST00000479353 KDM5AP29375 1690 aaKnown RBP28.61■■■□□ 2.17
PTGER3-210ENST00000479353 VGFO15240 615 aaPredicted RBP28.61■■■□□ 2.17
PTGER3-210ENST00000479353 NUTM2DQ5VT03 806 aaPredicted RBP28.6■■■□□ 2.17
PTGER3-210ENST00000479353 PER1O15534 1290 aaPredicted RBP28.59■■■□□ 2.17
PTGER3-210ENST00000479353 QRICH2Q9H0J4 1663 aa28.58■■■□□ 2.17
PTGER3-210ENST00000479353 ASXL1Q8IXJ9 1541 aa28.58■■■□□ 2.17
PTGER3-210ENST00000479353 ARHGEF28Q8N1W1 1705 aaKnown RBP28.58■■■□□ 2.17
PTGER3-210ENST00000479353 ZMYM3Q14202 1370 aa28.58■■■□□ 2.17
PTGER3-210ENST00000479353 SBNO2Q9Y2G9 1366 aa28.58■■■□□ 2.17
PTGER3-210ENST00000479353 A2ML1A8K2U0 1454 aa28.56■■■□□ 2.16
PTGER3-210ENST00000479353 MRS2Q9HD23 443 aa28.56■■■□□ 2.16
PTGER3-210ENST00000479353 TMEM132EQ6IEE7 984 aa28.54■■■□□ 2.16
PTGER3-210ENST00000479353 KTN1Q86UP2 1357 aaKnown RBP28.54■■■□□ 2.16
PTGER3-210ENST00000479353 CNGB1Q14028 1251 aaPredicted RBP28.53■■■□□ 2.16
PTGER3-210ENST00000479353 PANK3Q9H999 370 aa28.53■■■□□ 2.16
PTGER3-210ENST00000479353 TRHP20396 242 aaPredicted RBP28.51■■■□□ 2.15
PTGER3-210ENST00000479353 CDCA8Q53HL2 280 aa28.51■■■□□ 2.15
PTGER3-210ENST00000479353 PARD3Q8TEW0 1356 aa28.51■■■□□ 2.15
PTGER3-210ENST00000479353 CENPJQ9HC77 1338 aaPredicted RBP28.5■■■□□ 2.15
PTGER3-210ENST00000479353 TRAK1Q9UPV9 953 aa28.49■■■□□ 2.15
PTGER3-210ENST00000479353 RALBP1Q15311 655 aa28.48■■■□□ 2.15
PTGER3-210ENST00000479353 ESF1Q9H501 851 aaKnown RBP28.48■■■□□ 2.15
PTGER3-210ENST00000479353 SLC24A1O60721 1099 aa28.46■■■□□ 2.15
PTGER3-210ENST00000479353 ALKQ9UM73 1620 aa28.46■■■□□ 2.15
PTGER3-210ENST00000479353 SETD1AO15047 1707 aaKnown RBP28.46■■■□□ 2.15
PTGER3-210ENST00000479353 MYBBP1AQ9BQG0 1328 aaKnown RBP28.44■■■□□ 2.14
PTGER3-210ENST00000479353 RIMS2Q9UQ26 1411 aa28.43■■■□□ 2.14
PTGER3-210ENST00000479353 STAG3Q9UJ98 1225 aa28.43■■■□□ 2.14
PTGER3-210ENST00000479353 TNRQ92752 1358 aa28.43■■■□□ 2.14
PTGER3-210ENST00000479353 FER1L4A9Z1Z3 1794 aa28.42■■■□□ 2.14
PTGER3-210ENST00000479353 UBR1Q8IWV7 1749 aa28.42■■■□□ 2.14
PTGER3-210ENST00000479353 HNRNPUQ00839 825 aaKnown RBP eCLIP28.42■■■□□ 2.14
PTGER3-210ENST00000479353 FAM9BQ8IZU0 186 aa28.42■■■□□ 2.14
PTGER3-210ENST00000479353 C3P01024 1663 aa28.4■■■□□ 2.14
PTGER3-210ENST00000479353 BRD4O60885 1362 aaPredicted RBP28.4■■■□□ 2.14
PTGER3-210ENST00000479353 NRXN3Q9Y4C0 1643 aa28.39■■■□□ 2.14
PTGER3-210ENST00000479353 PTPRMP28827 1452 aa28.38■■■□□ 2.13
PTGER3-210ENST00000479353 TULP4Q9NRJ4 1543 aa28.38■■■□□ 2.13
PTGER3-210ENST00000479353 DNAJC5Q9H3Z4 198 aa28.36■■■□□ 2.13
PTGER3-210ENST00000479353 SENP3Q9H4L4 574 aaPredicted RBP28.36■■■□□ 2.13
PTGER3-210ENST00000479353 YTHDC2Q9H6S0 1430 aaKnown RBP28.35■■■□□ 2.13
PTGER3-210ENST00000479353 CC2D1BQ5T0F9 858 aaKnown RBP28.34■■■□□ 2.13
PTGER3-210ENST00000479353 PNISRQ8TF01 805 aaKnown RBP28.34■■■□□ 2.13
PTGER3-210ENST00000479353 AMER1Q5JTC6 1135 aaPredicted RBP28.33■■■□□ 2.13
PTGER3-210ENST00000479353 TMC1Q8TDI8 760 aa28.32■■■□□ 2.12
PTGER3-210ENST00000479353 NLRP13Q86W25 1043 aa28.31■■■□□ 2.12
PTGER3-210ENST00000479353 LRPPRCP42704 1394 aaKnown RBP28.3■■■□□ 2.12
PTGER3-210ENST00000479353 KNSTRNQ9Y448 316 aa28.29■■■□□ 2.12
PTGER3-210ENST00000479353 NPC1L1Q9UHC9 1359 aa28.29■■■□□ 2.12
PTGER3-210ENST00000479353 STK26Q9P289 416 aa28.28■■■□□ 2.12
PTGER3-210ENST00000479353 NLRP1Q9C000 1473 aa28.28■■■□□ 2.12
PTGER3-210ENST00000479353 DLC1Q96QB1 1528 aa28.26■■■□□ 2.11
PTGER3-210ENST00000479353 CEBPAP49715 358 aaPredicted RBP28.26■■■□□ 2.11
PTGER3-210ENST00000479353 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.25■■■□□ 2.11
PTGER3-210ENST00000479353 CARD14Q9BXL6 1004 aa28.25■■■□□ 2.11
PTGER3-210ENST00000479353 TMEM2Q9UHN6 1383 aa28.24■■■□□ 2.11
PTGER3-210ENST00000479353 ZBED9Q6R2W3 1325 aa28.24■■■□□ 2.11
PTGER3-210ENST00000479353 PUS7Q96PZ0 661 aaKnown RBP28.24■■■□□ 2.11
PTGER3-210ENST00000479353 EVC2Q86UK5 1308 aa28.23■■■□□ 2.11
PTGER3-210ENST00000479353 KNDC1Q76NI1 1749 aa28.2■■■□□ 2.11
PTGER3-210ENST00000479353 SAFB2Q14151 953 aaKnown RBP eCLIP28.2■■■□□ 2.1
PTGER3-210ENST00000479353 PRAM1Q96QH2 718 aa28.2■■■□□ 2.1
PTGER3-210ENST00000479353 USP32Q8NFA0 1604 aa28.19■■■□□ 2.1
PTGER3-210ENST00000479353 SLC12A5Q9H2X9 1139 aa28.18■■■□□ 2.1
PTGER3-210ENST00000479353 METP08581 1390 aa28.16■■■□□ 2.1
PTGER3-210ENST00000479353 ABCC11Q96J66 1382 aa28.15■■■□□ 2.1
PTGER3-210ENST00000479353 PPP2R1AP30153 589 aa28.15■■■□□ 2.1
PTGER3-210ENST00000479353 NSD3Q9BZ95 1437 aa28.15■■■□□ 2.1
PTGER3-210ENST00000479353 RIMS1Q86UR5 1692 aaKnown RBP28.14■■■□□ 2.1
PTGER3-210ENST00000479353 HDGFP51858 240 aaKnown RBP28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms