RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-208ENST00000477234 CADPS2Q86UW7 1296 aa19.36■□□□□ 0.69
SBF1-208ENST00000477234 COL16A1Q07092 1604 aaPredicted RBP19.35■□□□□ 0.69
SBF1-208ENST00000477234 C14orf37Q86TY3 774 aa19.34■□□□□ 0.69
SBF1-208ENST00000477234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.34■□□□□ 0.693e-8■■■■□ 26.2
SBF1-208ENST00000477234 ATF3P18847 181 aa19.32■□□□□ 0.68
SBF1-208ENST00000477234 RBM33Q96EV2 1170 aaKnown RBP19.32■□□□□ 0.68
SBF1-208ENST00000477234 SHPRHQ149N8 1683 aa19.32■□□□□ 0.68
SBF1-208ENST00000477234 ADGRB3O60242 1522 aa19.31■□□□□ 0.68
SBF1-208ENST00000477234 LMTK2Q8IWU2 1503 aa19.31■□□□□ 0.68
SBF1-208ENST00000477234 CHD2O14647 1828 aaKnown RBP19.31■□□□□ 0.68
SBF1-208ENST00000477234 PPP1R15AO75807 674 aaPredicted RBP19.31■□□□□ 0.68
SBF1-208ENST00000477234 C19orf44Q9H6X5 657 aa19.31■□□□□ 0.68
SBF1-208ENST00000477234 AHDC1Q5TGY3 1603 aaPredicted RBP19.3■□□□□ 0.68
SBF1-208ENST00000477234 PLEKHG1Q9ULL1 1385 aa19.3■□□□□ 0.68
SBF1-208ENST00000477234 TBX22Q9Y458 520 aa19.29■□□□□ 0.68
SBF1-208ENST00000477234 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.28■□□□□ 0.68
SBF1-208ENST00000477234 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
SBF1-208ENST00000477234 LRP6O75581 1613 aa19.28■□□□□ 0.68
SBF1-208ENST00000477234 NOS1P29475 1434 aa19.26■□□□□ 0.67
SBF1-208ENST00000477234 PIK3R4Q99570 1358 aa19.26■□□□□ 0.67
SBF1-208ENST00000477234 RPRD2Q5VT52 1461 aaKnown RBP19.25■□□□□ 0.67
SBF1-208ENST00000477234 ANKRD30AQ9BXX3 1397 aa19.24■□□□□ 0.67
SBF1-208ENST00000477234 RBM6P78332 1123 aaKnown RBP19.23■□□□□ 0.67
SBF1-208ENST00000477234 CROCC2H7BZ55 1655 aa19.23■□□□□ 0.67
SBF1-208ENST00000477234 NGLY1Q96IV0 654 aa19.22■□□□□ 0.67
SBF1-208ENST00000477234 AFF2P51816 1311 aa19.22■□□□□ 0.67
SBF1-208ENST00000477234 DIP2AQ14689 1571 aa19.21■□□□□ 0.67
SBF1-208ENST00000477234 LRRC59Q96AG4 307 aaKnown RBP19.21■□□□□ 0.67
SBF1-208ENST00000477234 ZFYVE9O95405 1425 aa19.2■□□□□ 0.66
SBF1-208ENST00000477234 NUTM2BA6NNL0 878 aaPredicted RBP19.2■□□□□ 0.66
SBF1-208ENST00000477234 NUTM2EB1AL46 878 aaPredicted RBP19.2■□□□□ 0.66
SBF1-208ENST00000477234 NUTM2AQ8IVF1 878 aaPredicted RBP19.2■□□□□ 0.66
SBF1-208ENST00000477234 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.2■□□□□ 0.66
SBF1-208ENST00000477234 ABCC5O15440 1437 aa19.19■□□□□ 0.66
SBF1-208ENST00000477234 DCCP43146 1447 aa19.19■□□□□ 0.66
SBF1-208ENST00000477234 RIMS2Q9UQ26 1411 aa19.19■□□□□ 0.66
SBF1-208ENST00000477234 QTRT2Q9H974 415 aaKnown RBP19.18■□□□□ 0.66
SBF1-208ENST00000477234 ZRANB1Q9UGI0 708 aa19.18■□□□□ 0.66
SBF1-208ENST00000477234 ATAD2Q6PL18 1390 aa19.18■□□□□ 0.66
SBF1-208ENST00000477234 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
SBF1-208ENST00000477234 NUTM2DQ5VT03 806 aaPredicted RBP19.17■□□□□ 0.66
SBF1-208ENST00000477234 DAPK1P53355 1430 aa19.17■□□□□ 0.66
SBF1-208ENST00000477234 SETD5Q9C0A6 1442 aa19.17■□□□□ 0.66
SBF1-208ENST00000477234 BRINP3Q76B58 766 aa19.16■□□□□ 0.66
SBF1-208ENST00000477234 PTPN23Q9H3S7 1636 aa19.14■□□□□ 0.65
SBF1-208ENST00000477234 SRCAPQ6ZRS2 3230 aa19.13■□□□□ 0.65
SBF1-208ENST00000477234 CCDC125Q86Z20 511 aa19.13■□□□□ 0.65
SBF1-208ENST00000477234 TRPM2O94759 1503 aa19.12■□□□□ 0.65
SBF1-208ENST00000477234 APLP2Q06481 763 aa19.12■□□□□ 0.65
SBF1-208ENST00000477234 C8orf37Q96NL8 207 aa19.12■□□□□ 0.65
SBF1-208ENST00000477234 RGS12O14924 1447 aa19.11■□□□□ 0.65
SBF1-208ENST00000477234 MYO5BQ9ULV0 1848 aa19.11■□□□□ 0.65
SBF1-208ENST00000477234 GCC2Q8IWJ2 1684 aa19.11■□□□□ 0.65
SBF1-208ENST00000477234 TMEM131LA2VDJ0 1609 aa19.11■□□□□ 0.65
SBF1-208ENST00000477234 KANK4Q5T7N3 995 aaPredicted RBP19.1■□□□□ 0.65
SBF1-208ENST00000477234 AMOTL2Q9Y2J4 779 aa19.1■□□□□ 0.65
SBF1-208ENST00000477234 CHGAP10645 457 aaKnown RBP19.09■□□□□ 0.65
SBF1-208ENST00000477234 ASXL1Q8IXJ9 1541 aa19.09■□□□□ 0.65
SBF1-208ENST00000477234 ADAMTS13Q76LX8 1427 aa19.08■□□□□ 0.65
SBF1-208ENST00000477234 CHIC2Q9UKJ5 165 aa19.07■□□□□ 0.64
SBF1-208ENST00000477234 NHSL1Q5SYE7 1610 aa19.07■□□□□ 0.64
SBF1-208ENST00000477234 TRPC5Q9UL62 973 aaPredicted RBP19.06■□□□□ 0.64
SBF1-208ENST00000477234 ANKRD50Q9ULJ7 1429 aa19.03■□□□□ 0.64
SBF1-208ENST00000477234 PNPLA6Q8IY17 1366 aa19.03■□□□□ 0.64
SBF1-208ENST00000477234 ADGRL2O95490 1459 aa19.03■□□□□ 0.64
SBF1-208ENST00000477234 MST1RQ04912 1400 aa19.02■□□□□ 0.64
SBF1-208ENST00000477234 USP21Q9UK80 565 aa19.02■□□□□ 0.64
SBF1-208ENST00000477234 PTCH1Q13635 1447 aa18.99■□□□□ 0.63
SBF1-208ENST00000477234 ADAMTS2O95450 1211 aa18.98■□□□□ 0.63
SBF1-208ENST00000477234 FNBP4Q8N3X1 1017 aaPredicted RBP18.96■□□□□ 0.63
SBF1-208ENST00000477234 ADGRL3Q9HAR2 1447 aa18.96■□□□□ 0.63
SBF1-208ENST00000477234 XRN1Q8IZH2 1706 aaKnown RBP18.95■□□□□ 0.62
SBF1-208ENST00000477234 UNC13BO14795 1591 aa18.95■□□□□ 0.62
SBF1-208ENST00000477234 PTPRUQ92729 1446 aa18.95■□□□□ 0.62
SBF1-208ENST00000477234 SETBP1Q9Y6X0 1596 aa18.93■□□□□ 0.62
SBF1-208ENST00000477234 LAMC1P11047 1609 aa18.91■□□□□ 0.62
SBF1-208ENST00000477234 SOS2Q07890 1332 aaPredicted RBP18.91■□□□□ 0.62
SBF1-208ENST00000477234 ATRNO75882 1429 aa18.91■□□□□ 0.62
SBF1-208ENST00000477234 SF3B2Q13435 895 aaKnown RBP18.9■□□□□ 0.62
SBF1-208ENST00000477234 IQGAP3Q86VI3 1631 aa18.89■□□□□ 0.62
SBF1-208ENST00000477234 E9PCH4 1651 aa18.89■□□□□ 0.61
SBF1-208ENST00000477234 ZNF326Q5BKZ1 582 aaKnown RBP18.88■□□□□ 0.61
SBF1-208ENST00000477234 C1orf167Q5SNV9 1468 aa18.88■□□□□ 0.61
SBF1-208ENST00000477234 FAM50AQ14320 339 aaKnown RBP18.87■□□□□ 0.61
SBF1-208ENST00000477234 BLMP54132 1417 aaPredicted RBP18.86■□□□□ 0.61
SBF1-208ENST00000477234 DDX17Q92841 729 aaKnown RBP18.86■□□□□ 0.61
SBF1-208ENST00000477234 EP400Q96L91 3159 aa18.86■□□□□ 0.61
SBF1-208ENST00000477234 GJD4Q96KN9 370 aaPredicted RBP18.85■□□□□ 0.61
SBF1-208ENST00000477234 NPHP3Q7Z494 1330 aa18.84■□□□□ 0.61
SBF1-208ENST00000477234 COL22A1Q8NFW1 1626 aaPredicted RBP18.84■□□□□ 0.61
SBF1-208ENST00000477234 NRXN3Q9Y4C0 1643 aa18.84■□□□□ 0.61
SBF1-208ENST00000477234 METP08581 1390 aa18.83■□□□□ 0.61
SBF1-208ENST00000477234 NALCNQ8IZF0 1738 aa18.83■□□□□ 0.6
SBF1-208ENST00000477234 LRPPRCP42704 1394 aaKnown RBP18.81■□□□□ 0.6
SBF1-208ENST00000477234 ROCK1Q13464 1354 aa18.81■□□□□ 0.6
SBF1-208ENST00000477234 LOC105371045A0A1W2PR82 267 aa18.81■□□□□ 0.6
SBF1-208ENST00000477234 NUP155O75694 1391 aa18.81■□□□□ 0.6
SBF1-208ENST00000477234 LRP5O75197 1615 aa18.8■□□□□ 0.6
SBF1-208ENST00000477234 BCL9LQ86UU0 1499 aa18.79■□□□□ 0.6
SBF1-208ENST00000477234 MARF1Q9Y4F3 1742 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms