RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-208ENST00000477234 NISCHQ9Y2I1 1504 aa31.23■■■□□ 2.59
SBF1-208ENST00000477234 ABCC9O60706 1549 aa28.82■■■□□ 2.2
SBF1-208ENST00000477234 CCDC180Q9P1Z9 1646 aa28.37■■■□□ 2.13
SBF1-208ENST00000477234 DNAJC5BQ9UF47 199 aa27.48■■□□□ 1.99
SBF1-208ENST00000477234 RB1CC1Q8TDY2 1594 aa27.33■■□□□ 1.97
SBF1-208ENST00000477234 NACADO15069 1562 aa27.01■■□□□ 1.91
SBF1-208ENST00000477234 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.86
SBF1-208ENST00000477234 DCAF8L2P0C7V8 631 aa26.64■■□□□ 1.86
SBF1-208ENST00000477234 UNC13AQ9UPW8 1703 aa26.53■■□□□ 1.84
SBF1-208ENST00000477234 MYO15BQ96JP2 1530 aa26.48■■□□□ 1.83
SBF1-208ENST00000477234 BICRAQ9NZM4 1560 aa26.36■■□□□ 1.81
SBF1-208ENST00000477234 SHROOM4Q9ULL8 1493 aa26.24■■□□□ 1.79
SBF1-208ENST00000477234 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
SBF1-208ENST00000477234 CC2D2AQ9P2K1 1620 aa26.04■■□□□ 1.76
SBF1-208ENST00000477234 DNAJC5Q9H3Z4 198 aa25.91■■□□□ 1.74
SBF1-208ENST00000477234 DCAF1Q9Y4B6 1507 aa25.86■■□□□ 1.73
SBF1-208ENST00000477234 EIF4G1Q04637 1599 aaKnown RBP25.85■■□□□ 1.73
SBF1-208ENST00000477234 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
SBF1-208ENST00000477234 SCRIBQ14160 1630 aa25.65■■□□□ 1.7
SBF1-208ENST00000477234 CUX2O14529 1486 aa25.28■■□□□ 1.64
SBF1-208ENST00000477234 ERCC6Q03468 1493 aa25.07■■□□□ 1.6
SBF1-208ENST00000477234 NCAPD3P42695 1498 aa24.89■■□□□ 1.58
SBF1-208ENST00000477234 SMARCA2P51531 1590 aa24.68■■□□□ 1.54
SBF1-208ENST00000477234 ATAD2BQ9ULI0 1458 aa24.67■■□□□ 1.54
SBF1-208ENST00000477234 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
SBF1-208ENST00000477234 NESP48681 1621 aa24.51■■□□□ 1.51
SBF1-208ENST00000477234 SMARCA4P51532 1647 aa24.47■■□□□ 1.51
SBF1-208ENST00000477234 THOC2Q8NI27 1593 aaKnown RBP24.46■■□□□ 1.51
SBF1-208ENST00000477234 LAMC3Q9Y6N6 1575 aa24.46■■□□□ 1.51
SBF1-208ENST00000477234 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.5
SBF1-208ENST00000477234 TRIM41Q8WV44 630 aa24.44■■□□□ 1.5
SBF1-208ENST00000477234 PDS5BQ9NTI5 1447 aa24.39■■□□□ 1.5
SBF1-208ENST00000477234 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
SBF1-208ENST00000477234 PEG3Q9GZU2 1588 aa24.3■■□□□ 1.48
SBF1-208ENST00000477234 KIF21AQ7Z4S6 1674 aa24.24■■□□□ 1.47
SBF1-208ENST00000477234 MRC2Q9UBG0 1479 aa24.12■■□□□ 1.45
SBF1-208ENST00000477234 CADPSQ9ULU8 1353 aa24.11■■□□□ 1.45
SBF1-208ENST00000477234 WDR62O43379 1518 aa24.06■■□□□ 1.44
SBF1-208ENST00000477234 OSCARQ8IYS5 282 aa24.03■■□□□ 1.44
SBF1-208ENST00000477234 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.43
SBF1-208ENST00000477234 CEP164Q9UPV0 1460 aa23.92■■□□□ 1.42
SBF1-208ENST00000477234 FANCD2Q9BXW9 1451 aa23.8■■□□□ 1.4
SBF1-208ENST00000477234 CFTRP13569 1480 aa23.68■■□□□ 1.38
SBF1-208ENST00000477234 WIZO95785 1651 aa23.64■■□□□ 1.37
SBF1-208ENST00000477234 RIMBP3CA6NJZ7 1639 aa23.63■■□□□ 1.37
SBF1-208ENST00000477234 RIMBP3BA6NNM3 1639 aa23.63■■□□□ 1.37
SBF1-208ENST00000477234 RIMBP3Q9UFD9 1639 aa23.63■■□□□ 1.37
SBF1-208ENST00000477234 URB2Q14146 1524 aaKnown RBP23.55■■□□□ 1.36
SBF1-208ENST00000477234 ARHGEF11O15085 1522 aa23.53■■□□□ 1.36
SBF1-208ENST00000477234 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
SBF1-208ENST00000477234 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
SBF1-208ENST00000477234 CYB5RLQ6IPT4 315 aa23.42■■□□□ 1.34
SBF1-208ENST00000477234 TRHP20396 242 aaPredicted RBP23.41■■□□□ 1.34
SBF1-208ENST00000477234 TOP2AP11388 1531 aaKnown RBP23.4■■□□□ 1.34
SBF1-208ENST00000477234 ABCC8Q09428 1581 aa23.36■■□□□ 1.33
SBF1-208ENST00000477234 ZNF608Q9ULD9 1512 aaPredicted RBP23.33■■□□□ 1.33
SBF1-208ENST00000477234 AEBP2Q6ZN18 517 aaPredicted RBP23.29■■□□□ 1.32
SBF1-208ENST00000477234 RSF1Q96T23 1441 aaPredicted RBP23.28■■□□□ 1.32
SBF1-208ENST00000477234 TOPBP1Q92547 1522 aa23.26■■□□□ 1.31
SBF1-208ENST00000477234 EIF4G3O43432 1585 aaKnown RBP23.24■■□□□ 1.31
SBF1-208ENST00000477234 ARAP1Q96P48 1450 aa23.2■■□□□ 1.3
SBF1-208ENST00000477234 CHD1O14646 1710 aa23.17■■□□□ 1.3
SBF1-208ENST00000477234 FBLN2P98095 1184 aa23.16■■□□□ 1.3
SBF1-208ENST00000477234 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.3
SBF1-208ENST00000477234 AQRO60306 1485 aaKnown RBP eCLIP23.1■■□□□ 1.291e-9■■■■■ 35.6
SBF1-208ENST00000477234 CCDC88BA6NC98 1476 aa23.09■■□□□ 1.29
SBF1-208ENST00000477234 TARBP1Q13395 1621 aaKnown RBP23.06■■□□□ 1.28
SBF1-208ENST00000477234 WDR97A6NE52 1622 aa22.99■■□□□ 1.27
SBF1-208ENST00000477234 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
SBF1-208ENST00000477234 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
SBF1-208ENST00000477234 CHMP7Q8WUX9 453 aaPredicted RBP22.95■■□□□ 1.26
SBF1-208ENST00000477234 CLASP1Q7Z460 1538 aa22.91■■□□□ 1.26
SBF1-208ENST00000477234 SOGA1O94964 1423 aa22.91■■□□□ 1.26
SBF1-208ENST00000477234 MAGI1Q96QZ7 1491 aaPredicted RBP22.9■■□□□ 1.26
SBF1-208ENST00000477234 TDRD9Q8NDG6 1382 aaKnown RBP22.87■■□□□ 1.25
SBF1-208ENST00000477234 SNAPC4Q5SXM2 1469 aa22.86■■□□□ 1.25
SBF1-208ENST00000477234 RAD54L2Q9Y4B4 1467 aa22.82■■□□□ 1.24
SBF1-208ENST00000477234 GRIN2BQ13224 1484 aa22.8■■□□□ 1.24
SBF1-208ENST00000477234 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
SBF1-208ENST00000477234 GAPVD1Q14C86 1478 aa22.77■■□□□ 1.24
SBF1-208ENST00000477234 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
SBF1-208ENST00000477234 PBRM1Q86U86 1689 aa22.59■■□□□ 1.21
SBF1-208ENST00000477234 CUX1P39880 1505 aa22.56■■□□□ 1.2
SBF1-208ENST00000477234 ABCA10Q8WWZ4 1543 aa22.5■■□□□ 1.19
SBF1-208ENST00000477234 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
SBF1-208ENST00000477234 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
SBF1-208ENST00000477234 CEP170Q5SW79 1584 aa22.42■■□□□ 1.18
SBF1-208ENST00000477234 NUP160Q12769 1436 aa22.42■■□□□ 1.18
SBF1-208ENST00000477234 KIF13AQ9H1H9 1805 aa22.38■■□□□ 1.17
SBF1-208ENST00000477234 SHROOM2Q13796 1616 aa22.37■■□□□ 1.17
SBF1-208ENST00000477234 ERCC6L2Q5T890 1561 aa22.37■■□□□ 1.17
SBF1-208ENST00000477234 NPM1P06748 294 aaKnown RBP eCLIP22.36■■□□□ 1.17
SBF1-208ENST00000477234 FHAD1B1AJZ9 1412 aa22.34■■□□□ 1.17
SBF1-208ENST00000477234 WRNQ14191 1432 aaPredicted RBP eCLIP22.34■■□□□ 1.17
SBF1-208ENST00000477234 ADAMTS12P58397 1594 aa22.33■■□□□ 1.17
SBF1-208ENST00000477234 FAM69CQ0P6D2 419 aa22.29■■□□□ 1.16
SBF1-208ENST00000477234 ABCC10Q5T3U5 1492 aa22.28■■□□□ 1.16
SBF1-208ENST00000477234 PRG4Q92954 1404 aaPredicted RBP22.25■■□□□ 1.15
SBF1-208ENST00000477234 ERICH3Q5RHP9 1530 aa22.25■■□□□ 1.15
SBF1-208ENST00000477234 JPH4Q96JJ6 628 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms