RNA–Protein interactions for RNA: ENST00000476556.5

RERE-212, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 1 (best) BASIC

Gene RERE, Length 4,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-212ENST00000476556 CFAP70Q5T0N1 1121 aa16.43■□□□□ 0.22
RERE-212ENST00000476556 DDX49Q9Y6V7 483 aaKnown RBP16.42■□□□□ 0.22
RERE-212ENST00000476556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.42■□□□□ 0.223e-7■□□□□ 11.1
RERE-212ENST00000476556 PDZRN3Q9UPQ7 1066 aa16.42■□□□□ 0.22
RERE-212ENST00000476556 HSP90AA2PQ14568 343 aaPredicted RBP16.41■□□□□ 0.22
RERE-212ENST00000476556 STAC3Q96MF2 364 aa16.41■□□□□ 0.22
RERE-212ENST00000476556 LNPKQ9C0E8 428 aa16.41■□□□□ 0.22
RERE-212ENST00000476556 IQGAP2Q13576 1575 aa16.41■□□□□ 0.22
RERE-212ENST00000476556 EVC2Q86UK5 1308 aa16.41■□□□□ 0.22
RERE-212ENST00000476556 ARID3AQ99856 593 aa16.41■□□□□ 0.22
RERE-212ENST00000476556 CAMSAP2Q08AD1 1489 aa16.41■□□□□ 0.22
RERE-212ENST00000476556 MTHFSP49914 203 aa16.4■□□□□ 0.22
RERE-212ENST00000476556 OS9Q13438 667 aaPredicted RBP16.4■□□□□ 0.22
RERE-212ENST00000476556 AAMPQ13685 434 aa16.4■□□□□ 0.22
RERE-212ENST00000476556 SLFN5Q08AF3 891 aa16.39■□□□□ 0.21
RERE-212ENST00000476556 RIPK4P57078 832 aa16.39■□□□□ 0.21
RERE-212ENST00000476556 UGGT2Q9NYU1 1516 aa16.38■□□□□ 0.21
RERE-212ENST00000476556 CFAP43Q8NDM7 1665 aa16.38■□□□□ 0.21
RERE-212ENST00000476556 SKOR2Q2VWA4 1001 aaPredicted RBP16.38■□□□□ 0.21
RERE-212ENST00000476556 KCNJ4P48050 445 aa16.38■□□□□ 0.21
RERE-212ENST00000476556 FOXD4L5Q5VV16 416 aaPredicted RBP16.38■□□□□ 0.21
RERE-212ENST00000476556 FOXD4L4Q8WXT5 416 aaPredicted RBP16.38■□□□□ 0.21
RERE-212ENST00000476556 RTF1Q92541 710 aaKnown RBP16.38■□□□□ 0.21
RERE-212ENST00000476556 NOL8Q76FK4 1167 aaKnown RBP16.37■□□□□ 0.21
RERE-212ENST00000476556 AFAP1Q8N556 730 aa16.36■□□□□ 0.21
RERE-212ENST00000476556 MLECQ14165 292 aa16.36■□□□□ 0.21
RERE-212ENST00000476556 ARHGAP5Q13017 1502 aa16.36■□□□□ 0.21
RERE-212ENST00000476556 ST18O60284 1047 aa16.36■□□□□ 0.21
RERE-212ENST00000476556 TRAK2O60296 914 aa16.35■□□□□ 0.21
RERE-212ENST00000476556 TMEM132EQ6IEE7 984 aa16.35■□□□□ 0.21
RERE-212ENST00000476556 SLC4A10Q6U841 1118 aa16.35■□□□□ 0.21
RERE-212ENST00000476556 KIAA0586Q9BVV6 1533 aa16.35■□□□□ 0.21
RERE-212ENST00000476556 MINK1Q8N4C8 1332 aaPredicted RBP16.35■□□□□ 0.21
RERE-212ENST00000476556 SYNJ2O15056 1496 aa16.34■□□□□ 0.21
RERE-212ENST00000476556 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
RERE-212ENST00000476556 SNAPC4Q5SXM2 1469 aa16.34■□□□□ 0.21
RERE-212ENST00000476556 VGFO15240 615 aaPredicted RBP16.34■□□□□ 0.21
RERE-212ENST00000476556 DIAPH1O60610 1272 aaKnown RBP16.34■□□□□ 0.21
RERE-212ENST00000476556 DUSP27Q5VZP5 1158 aa16.34■□□□□ 0.21
RERE-212ENST00000476556 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
RERE-212ENST00000476556 GGNBP2Q9H3C7 697 aa16.33■□□□□ 0.2
RERE-212ENST00000476556 TRIM6-TRIM34B2RNG4 842 aa16.33■□□□□ 0.2
RERE-212ENST00000476556 HMMRO75330 724 aa16.33■□□□□ 0.2
RERE-212ENST00000476556 SLC12A5Q9H2X9 1139 aa16.33■□□□□ 0.2
RERE-212ENST00000476556 KIF16BQ96L93 1317 aa16.33■□□□□ 0.2
RERE-212ENST00000476556 GOLGA6L4A6NEF3 574 aa16.33■□□□□ 0.2
RERE-212ENST00000476556 LMOD3Q0VAK6 560 aa16.33■□□□□ 0.2
RERE-212ENST00000476556 MRE11P49959 708 aa16.32■□□□□ 0.2
RERE-212ENST00000476556 PLB1Q6P1J6 1458 aa16.32■□□□□ 0.2
RERE-212ENST00000476556 EXOSC9Q06265 439 aaKnown RBP16.32■□□□□ 0.2
RERE-212ENST00000476556 KIAA2012Q0VF49 1180 aa16.32■□□□□ 0.2
RERE-212ENST00000476556 TSR2Q969E8 191 aaKnown RBP16.32■□□□□ 0.2
RERE-212ENST00000476556 SYAP1Q96A49 352 aaPredicted RBP16.32■□□□□ 0.2
RERE-212ENST00000476556 VSIG10Q8N0Z9 540 aa16.31■□□□□ 0.2
RERE-212ENST00000476556 DHX29Q7Z478 1369 aaKnown RBP16.31■□□□□ 0.2
RERE-212ENST00000476556 CHAF1AQ13111 956 aaPredicted RBP16.31■□□□□ 0.2
RERE-212ENST00000476556 ZRSR1Q15695 479 aaKnown RBP16.31■□□□□ 0.2
RERE-212ENST00000476556 ARHGEF11O15085 1522 aa16.31■□□□□ 0.2
RERE-212ENST00000476556 URB2Q14146 1524 aaKnown RBP16.31■□□□□ 0.2
RERE-212ENST00000476556 WWC1Q8IX03 1113 aa16.3■□□□□ 0.2
RERE-212ENST00000476556 KIAA1211Q6ZU35 1233 aa16.3■□□□□ 0.2
RERE-212ENST00000476556 CABP2Q9NPB3 220 aa16.29■□□□□ 0.2
RERE-212ENST00000476556 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
RERE-212ENST00000476556 MRC2Q9UBG0 1479 aa16.29■□□□□ 0.2
RERE-212ENST00000476556 DISP3Q9P2K9 1392 aa16.29■□□□□ 0.2
RERE-212ENST00000476556 FGD1P98174 961 aa16.28■□□□□ 0.2
RERE-212ENST00000476556 PLEKHH2Q8IVE3 1493 aa16.28■□□□□ 0.2
RERE-212ENST00000476556 IFT140Q96RY7 1462 aa16.28■□□□□ 0.2
RERE-212ENST00000476556 FOXD4L6Q3SYB3 417 aaPredicted RBP16.28■□□□□ 0.2
RERE-212ENST00000476556 FOXD4L3Q6VB84 417 aaPredicted RBP16.28■□□□□ 0.2
RERE-212ENST00000476556 NINLQ9Y2I6 1382 aa16.28■□□□□ 0.2
RERE-212ENST00000476556 TCOF1Q13428 1488 aaKnown RBP16.27■□□□□ 0.19
RERE-212ENST00000476556 MVPQ14764 893 aaKnown RBP16.26■□□□□ 0.19
RERE-212ENST00000476556 DRC7Q8IY82 874 aa16.26■□□□□ 0.19
RERE-212ENST00000476556 DNAJC5BQ9UF47 199 aa16.26■□□□□ 0.19
RERE-212ENST00000476556 HMOX1P09601 288 aa16.25■□□□□ 0.19
RERE-212ENST00000476556 MCM4P33991 863 aa16.25■□□□□ 0.19
RERE-212ENST00000476556 WDR63Q8IWG1 891 aa16.25■□□□□ 0.19
RERE-212ENST00000476556 RALGAPBQ86X10 1494 aa16.25■□□□□ 0.19
RERE-212ENST00000476556 SCAPERQ9BY12 1400 aa16.25■□□□□ 0.19
RERE-212ENST00000476556 MAGI1Q96QZ7 1491 aaPredicted RBP16.24■□□□□ 0.19
RERE-212ENST00000476556 API5Q9BZZ5 524 aaKnown RBP16.24■□□□□ 0.19
RERE-212ENST00000476556 NKTRP30414 1462 aaKnown RBP16.24■□□□□ 0.19
RERE-212ENST00000476556 MCTP1Q6DN14 999 aa16.24■□□□□ 0.19
RERE-212ENST00000476556 NOB1Q9ULX3 412 aaKnown RBP16.24■□□□□ 0.19
RERE-212ENST00000476556 LRPPRCP42704 1394 aaKnown RBP16.24■□□□□ 0.19
RERE-212ENST00000476556 CCDC141Q6ZP82 1450 aa16.24■□□□□ 0.19
RERE-212ENST00000476556 RILPL2Q969X0 211 aa16.23■□□□□ 0.19
RERE-212ENST00000476556 PARD3Q8TEW0 1356 aa16.23■□□□□ 0.19
RERE-212ENST00000476556 NAP1L2Q9ULW6 460 aaPredicted RBP16.23■□□□□ 0.19
RERE-212ENST00000476556 NUTM2FA1L443 756 aa16.23■□□□□ 0.19
RERE-212ENST00000476556 IGHDP01880 384 aa16.23■□□□□ 0.19
RERE-212ENST00000476556 HDGFP51858 240 aaKnown RBP16.23■□□□□ 0.19
RERE-212ENST00000476556 TAOK2Q9UL54 1235 aa16.23■□□□□ 0.19
RERE-212ENST00000476556 C1orf115Q9H7X2 142 aa16.22■□□□□ 0.19
RERE-212ENST00000476556 GPATCH8Q9UKJ3 1502 aaKnown RBP16.22■□□□□ 0.19
RERE-212ENST00000476556 REC8O95072 547 aa16.22■□□□□ 0.19
RERE-212ENST00000476556 LMOD2Q6P5Q4 547 aa16.22■□□□□ 0.19
RERE-212ENST00000476556 RNF123Q5XPI4 1314 aa16.22■□□□□ 0.19
RERE-212ENST00000476556 RARSP54136 660 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms