RNA–Protein interactions for RNA: ENST00000476477.6

ECHDC2-208, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 1,676 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-208ENST00000476477 NRXN1Q9ULB1 1477 aa24.74■■□□□ 1.55
ECHDC2-208ENST00000476477 TESK2Q96S53 571 aa24.74■■□□□ 1.55
ECHDC2-208ENST00000476477 SCAF1Q9H7N4 1312 aaKnown RBP24.72■■□□□ 1.55
ECHDC2-208ENST00000476477 PRKRIP1Q9H875 184 aaPredicted RBP24.71■■□□□ 1.55
ECHDC2-208ENST00000476477 SCAF11Q99590 1463 aaKnown RBP24.71■■□□□ 1.55
ECHDC2-208ENST00000476477 CFAP70Q5T0N1 1121 aa24.7■■□□□ 1.54
ECHDC2-208ENST00000476477 CLTCQ00610 1675 aaKnown RBP24.69■■□□□ 1.54
ECHDC2-208ENST00000476477 DISP3Q9P2K9 1392 aa24.69■■□□□ 1.54
ECHDC2-208ENST00000476477 IDI1Q13907 227 aa24.67■■□□□ 1.54
ECHDC2-208ENST00000476477 PPP6R1Q9UPN7 881 aa24.67■■□□□ 1.54
ECHDC2-208ENST00000476477 MLECQ14165 292 aa24.66■■□□□ 1.54
ECHDC2-208ENST00000476477 RPGRIP1LQ68CZ1 1315 aa24.66■■□□□ 1.54
ECHDC2-208ENST00000476477 FBXO31Q5XUX0 539 aaPredicted RBP24.66■■□□□ 1.54
ECHDC2-208ENST00000476477 ERVK-7P63135 1459 aa24.65■■□□□ 1.54
ECHDC2-208ENST00000476477 NEXMIFQ5QGS0 1516 aa24.64■■□□□ 1.54
ECHDC2-208ENST00000476477 SLC52A1Q9NWF4 448 aa24.64■■□□□ 1.53
ECHDC2-208ENST00000476477 PIK3C2GO75747 1445 aa24.63■■□□□ 1.53
ECHDC2-208ENST00000476477 MYO5BQ9ULV0 1848 aa24.62■■□□□ 1.53
ECHDC2-208ENST00000476477 TMF1P82094 1093 aa24.62■■□□□ 1.53
ECHDC2-208ENST00000476477 CCDC184Q52MB2 194 aa24.62■■□□□ 1.53
ECHDC2-208ENST00000476477 TMEM131LA2VDJ0 1609 aa24.6■■□□□ 1.53
ECHDC2-208ENST00000476477 SETBP1Q9Y6X0 1596 aa24.59■■□□□ 1.53
ECHDC2-208ENST00000476477 NUTM2DQ5VT03 806 aaPredicted RBP24.58■■□□□ 1.53
ECHDC2-208ENST00000476477 EIF3AQ14152 1382 aaKnown RBP24.58■■□□□ 1.52
ECHDC2-208ENST00000476477 C14orf93Q9H972 538 aaKnown RBP24.57■■□□□ 1.52
ECHDC2-208ENST00000476477 CNGB1Q14028 1251 aaPredicted RBP24.56■■□□□ 1.52
ECHDC2-208ENST00000476477 SPATA31D1Q6ZQQ2 1576 aa24.56■■□□□ 1.52
ECHDC2-208ENST00000476477 GTF3C3Q9Y5Q9 886 aa24.56■■□□□ 1.52
ECHDC2-208ENST00000476477 ADGRB1O14514 1584 aa24.54■■□□□ 1.52
ECHDC2-208ENST00000476477 VGFO15240 615 aaPredicted RBP24.53■■□□□ 1.52
ECHDC2-208ENST00000476477 TRHP20396 242 aaPredicted RBP24.52■■□□□ 1.52
ECHDC2-208ENST00000476477 MYO3AQ8NEV4 1616 aa24.52■■□□□ 1.52
ECHDC2-208ENST00000476477 ZFYVE9O95405 1425 aa24.5■■□□□ 1.51
ECHDC2-208ENST00000476477 MRS2Q9HD23 443 aa24.5■■□□□ 1.51
ECHDC2-208ENST00000476477 TMEM132EQ6IEE7 984 aa24.49■■□□□ 1.51
ECHDC2-208ENST00000476477 ZMYM3Q14202 1370 aa24.48■■□□□ 1.51
ECHDC2-208ENST00000476477 PER1O15534 1290 aaPredicted RBP24.47■■□□□ 1.51
ECHDC2-208ENST00000476477 ESF1Q9H501 851 aaKnown RBP24.46■■□□□ 1.51
ECHDC2-208ENST00000476477 PANK3Q9H999 370 aa24.46■■□□□ 1.51
ECHDC2-208ENST00000476477 TRAK1Q9UPV9 953 aa24.46■■□□□ 1.51
ECHDC2-208ENST00000476477 A2ML1A8K2U0 1454 aa24.44■■□□□ 1.5
ECHDC2-208ENST00000476477 CDCA8Q53HL2 280 aa24.43■■□□□ 1.5
ECHDC2-208ENST00000476477 KDM5AP29375 1690 aaKnown RBP24.43■■□□□ 1.5
ECHDC2-208ENST00000476477 MYOM1P52179 1685 aa24.43■■□□□ 1.5
ECHDC2-208ENST00000476477 CENPJQ9HC77 1338 aaPredicted RBP24.43■■□□□ 1.5
ECHDC2-208ENST00000476477 STAG3Q9UJ98 1225 aa24.43■■□□□ 1.5
ECHDC2-208ENST00000476477 ASXL1Q8IXJ9 1541 aa24.42■■□□□ 1.5
ECHDC2-208ENST00000476477 SENP3Q9H4L4 574 aaPredicted RBP24.41■■□□□ 1.5
ECHDC2-208ENST00000476477 QRICH2Q9H0J4 1663 aa24.41■■□□□ 1.5
ECHDC2-208ENST00000476477 SBNO2Q9Y2G9 1366 aa24.41■■□□□ 1.5
ECHDC2-208ENST00000476477 KTN1Q86UP2 1357 aaKnown RBP24.4■■□□□ 1.5
ECHDC2-208ENST00000476477 RALBP1Q15311 655 aa24.4■■□□□ 1.5
ECHDC2-208ENST00000476477 FAM9BQ8IZU0 186 aa24.4■■□□□ 1.5
ECHDC2-208ENST00000476477 ARHGEF28Q8N1W1 1705 aaKnown RBP24.39■■□□□ 1.49
ECHDC2-208ENST00000476477 PARD3Q8TEW0 1356 aa24.38■■□□□ 1.49
ECHDC2-208ENST00000476477 HNRNPUQ00839 825 aaKnown RBP eCLIP24.37■■□□□ 1.498e-9■□□□□ 9.2
ECHDC2-208ENST00000476477 MYBBP1AQ9BQG0 1328 aaKnown RBP24.37■■□□□ 1.49
ECHDC2-208ENST00000476477 SLC24A1O60721 1099 aa24.37■■□□□ 1.49
ECHDC2-208ENST00000476477 RIMS2Q9UQ26 1411 aa24.36■■□□□ 1.49
ECHDC2-208ENST00000476477 TNRQ92752 1358 aa24.35■■□□□ 1.49
ECHDC2-208ENST00000476477 ALKQ9UM73 1620 aa24.34■■□□□ 1.49
ECHDC2-208ENST00000476477 CC2D1BQ5T0F9 858 aaKnown RBP24.33■■□□□ 1.49
ECHDC2-208ENST00000476477 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
ECHDC2-208ENST00000476477 BRD4O60885 1362 aaPredicted RBP24.31■■□□□ 1.48
ECHDC2-208ENST00000476477 TMC1Q8TDI8 760 aa24.29■■□□□ 1.48
ECHDC2-208ENST00000476477 STK26Q9P289 416 aa24.29■■□□□ 1.48
ECHDC2-208ENST00000476477 YTHDC2Q9H6S0 1430 aaKnown RBP24.27■■□□□ 1.48
ECHDC2-208ENST00000476477 PNISRQ8TF01 805 aaKnown RBP24.27■■□□□ 1.48
ECHDC2-208ENST00000476477 KNSTRNQ9Y448 316 aa24.27■■□□□ 1.48
ECHDC2-208ENST00000476477 PTPRMP28827 1452 aa24.27■■□□□ 1.48
ECHDC2-208ENST00000476477 FER1L4A9Z1Z3 1794 aa24.26■■□□□ 1.47
ECHDC2-208ENST00000476477 SETD1AO15047 1707 aaKnown RBP24.26■■□□□ 1.47
ECHDC2-208ENST00000476477 TULP4Q9NRJ4 1543 aa24.26■■□□□ 1.47
ECHDC2-208ENST00000476477 CEBPAP49715 358 aaPredicted RBP24.26■■□□□ 1.47
ECHDC2-208ENST00000476477 AMER1Q5JTC6 1135 aaPredicted RBP24.26■■□□□ 1.47
ECHDC2-208ENST00000476477 UBR1Q8IWV7 1749 aa24.25■■□□□ 1.47
ECHDC2-208ENST00000476477 C3P01024 1663 aa24.25■■□□□ 1.47
ECHDC2-208ENST00000476477 NLRP13Q86W25 1043 aa24.24■■□□□ 1.47
ECHDC2-208ENST00000476477 NRXN3Q9Y4C0 1643 aa24.24■■□□□ 1.47
ECHDC2-208ENST00000476477 SAFB2Q14151 953 aaKnown RBP eCLIP24.22■■□□□ 1.47
ECHDC2-208ENST00000476477 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.22■■□□□ 1.47
ECHDC2-208ENST00000476477 CARD14Q9BXL6 1004 aa24.2■■□□□ 1.46
ECHDC2-208ENST00000476477 LRPPRCP42704 1394 aaKnown RBP24.2■■□□□ 1.46
ECHDC2-208ENST00000476477 EVC2Q86UK5 1308 aa24.19■■□□□ 1.46
ECHDC2-208ENST00000476477 PRAM1Q96QH2 718 aa24.18■■□□□ 1.46
ECHDC2-208ENST00000476477 NPC1L1Q9UHC9 1359 aa24.18■■□□□ 1.46
ECHDC2-208ENST00000476477 TMEM2Q9UHN6 1383 aa24.18■■□□□ 1.46
ECHDC2-208ENST00000476477 NLRP1Q9C000 1473 aa24.18■■□□□ 1.46
ECHDC2-208ENST00000476477 ZBED9Q6R2W3 1325 aa24.17■■□□□ 1.46
ECHDC2-208ENST00000476477 PLPPR3Q6T4P5 718 aa24.17■■□□□ 1.46
ECHDC2-208ENST00000476477 PUS7Q96PZ0 661 aaKnown RBP24.16■■□□□ 1.46
ECHDC2-208ENST00000476477 SLC12A5Q9H2X9 1139 aa24.16■■□□□ 1.46
ECHDC2-208ENST00000476477 POGKQ9P215 609 aa24.15■■□□□ 1.46
ECHDC2-208ENST00000476477 DLC1Q96QB1 1528 aa24.15■■□□□ 1.46
ECHDC2-208ENST00000476477 CABP2Q9NPB3 220 aa24.15■■□□□ 1.46
ECHDC2-208ENST00000476477 MINK1Q8N4C8 1332 aaPredicted RBP24.13■■□□□ 1.45
ECHDC2-208ENST00000476477 PPP2R1AP30153 589 aa24.13■■□□□ 1.45
ECHDC2-208ENST00000476477 HDGFP51858 240 aaKnown RBP24.13■■□□□ 1.45
ECHDC2-208ENST00000476477 METP08581 1390 aa24.12■■□□□ 1.45
ECHDC2-208ENST00000476477 NSD3Q9BZ95 1437 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms