RNA–Protein interactions for RNA: ENST00000476477.6

ECHDC2-208, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 1,676 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-208ENST00000476477 NISCHQ9Y2I1 1504 aa39.97■■■■□ 3.99
ECHDC2-208ENST00000476477 CCDC180Q9P1Z9 1646 aa34.67■■■■□ 3.14
ECHDC2-208ENST00000476477 ZCCHC6Q5VYS8 1495 aaKnown RBP33.64■■■□□ 2.98
ECHDC2-208ENST00000476477 DCAF8L2P0C7V8 631 aa33.01■■■□□ 2.87
ECHDC2-208ENST00000476477 DCAF1Q9Y4B6 1507 aa32.97■■■□□ 2.87
ECHDC2-208ENST00000476477 SHROOM4Q9ULL8 1493 aa32.93■■■□□ 2.86
ECHDC2-208ENST00000476477 ABCC9O60706 1549 aa32.69■■■□□ 2.82
ECHDC2-208ENST00000476477 MYO15BQ96JP2 1530 aa32.45■■■□□ 2.79
ECHDC2-208ENST00000476477 NACADO15069 1562 aa32.23■■■□□ 2.75
ECHDC2-208ENST00000476477 SCRIBQ14160 1630 aa32.05■■■□□ 2.72
ECHDC2-208ENST00000476477 RB1CC1Q8TDY2 1594 aa31.91■■■□□ 2.7
ECHDC2-208ENST00000476477 SUPT5HO00267 1087 aaKnown RBP31.77■■■□□ 2.68
ECHDC2-208ENST00000476477 UNC13AQ9UPW8 1703 aa31.37■■■□□ 2.61
ECHDC2-208ENST00000476477 RSF1Q96T23 1441 aaPredicted RBP31.14■■■□□ 2.58
ECHDC2-208ENST00000476477 CECR2Q9BXF3 1484 aa31.12■■■□□ 2.57
ECHDC2-208ENST00000476477 BICRAQ9NZM4 1560 aa31.03■■■□□ 2.56
ECHDC2-208ENST00000476477 MROH2BQ7Z745 1585 aa30.95■■■□□ 2.55
ECHDC2-208ENST00000476477 PABPN1Q86U42 306 aaKnown RBP eCLIP30.91■■■□□ 2.547e-7■□□□□ 10.8
ECHDC2-208ENST00000476477 BAZ1AQ9NRL2 1556 aaPredicted RBP30.8■■■□□ 2.52
ECHDC2-208ENST00000476477 WIZO95785 1651 aa30.73■■■□□ 2.51
ECHDC2-208ENST00000476477 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
ECHDC2-208ENST00000476477 CHIC1Q5VXU3 224 aa30.53■■■□□ 2.48
ECHDC2-208ENST00000476477 TOP2AP11388 1531 aaKnown RBP30.34■■■□□ 2.45
ECHDC2-208ENST00000476477 PEG3Q9GZU2 1588 aa30.24■■■□□ 2.43
ECHDC2-208ENST00000476477 ATAD2BQ9ULI0 1458 aa30.12■■■□□ 2.41
ECHDC2-208ENST00000476477 SMARCA2P51531 1590 aa30.11■■■□□ 2.41
ECHDC2-208ENST00000476477 CCDC88BA6NC98 1476 aa30.08■■■□□ 2.41
ECHDC2-208ENST00000476477 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
ECHDC2-208ENST00000476477 BAZ1BQ9UIG0 1483 aaKnown RBP29.94■■■□□ 2.38
ECHDC2-208ENST00000476477 TRIM41Q8WV44 630 aa29.78■■■□□ 2.36
ECHDC2-208ENST00000476477 NCAPD3P42695 1498 aa29.77■■■□□ 2.36
ECHDC2-208ENST00000476477 HMGXB3Q12766 1538 aa29.74■■■□□ 2.35
ECHDC2-208ENST00000476477 ABCC8Q09428 1581 aa29.58■■■□□ 2.33
ECHDC2-208ENST00000476477 CC2D2AQ9P2K1 1620 aa29.55■■■□□ 2.32
ECHDC2-208ENST00000476477 LOC105371045A0A1W2PR82 267 aa29.44■■■□□ 2.3
ECHDC2-208ENST00000476477 FAM9AQ8IZU1 332 aaPredicted RBP29.35■■■□□ 2.29
ECHDC2-208ENST00000476477 WRNQ14191 1432 aaPredicted RBP eCLIP29.27■■■□□ 2.28
ECHDC2-208ENST00000476477 SYNJ1O43426 1573 aa29.2■■■□□ 2.27
ECHDC2-208ENST00000476477 CFTRP13569 1480 aa29.19■■■□□ 2.26
ECHDC2-208ENST00000476477 SOGA1O94964 1423 aa29.07■■■□□ 2.24
ECHDC2-208ENST00000476477 PRDM2Q13029 1718 aa29.06■■■□□ 2.24
ECHDC2-208ENST00000476477 CADPSQ9ULU8 1353 aa29.05■■■□□ 2.24
ECHDC2-208ENST00000476477 TOP2BQ02880 1626 aa29■■■□□ 2.23
ECHDC2-208ENST00000476477 EHMT2Q96KQ7 1210 aa28.99■■■□□ 2.23
ECHDC2-208ENST00000476477 RUSC2Q8N2Y8 1516 aa28.98■■■□□ 2.23
ECHDC2-208ENST00000476477 BIVM-ERCC5R4GMW8 1640 aa28.97■■■□□ 2.23
ECHDC2-208ENST00000476477 EEA1Q15075 1411 aa28.93■■■□□ 2.22
ECHDC2-208ENST00000476477 CUX1P39880 1505 aa28.91■■■□□ 2.22
ECHDC2-208ENST00000476477 DNAJC5BQ9UF47 199 aa28.86■■■□□ 2.21
ECHDC2-208ENST00000476477 CSRNP3Q8WYN3 585 aa28.81■■■□□ 2.2
ECHDC2-208ENST00000476477 NESP48681 1621 aa28.81■■■□□ 2.2
ECHDC2-208ENST00000476477 FANCD2Q9BXW9 1451 aa28.75■■■□□ 2.19
ECHDC2-208ENST00000476477 LAMC3Q9Y6N6 1575 aa28.7■■■□□ 2.18
ECHDC2-208ENST00000476477 GOLGA3Q08378 1498 aa28.6■■■□□ 2.17
ECHDC2-208ENST00000476477 KIF21BO75037 1637 aa28.6■■■□□ 2.17
ECHDC2-208ENST00000476477 TNIKQ9UKE5 1360 aa28.57■■■□□ 2.16
ECHDC2-208ENST00000476477 CEP164Q9UPV0 1460 aa28.56■■■□□ 2.16
ECHDC2-208ENST00000476477 FGD5Q6ZNL6 1462 aa28.54■■■□□ 2.16
ECHDC2-208ENST00000476477 DNMBPQ6XZF7 1577 aa28.52■■■□□ 2.16
ECHDC2-208ENST00000476477 UBTFP17480 764 aaKnown RBP28.49■■■□□ 2.15
ECHDC2-208ENST00000476477 KIF27Q86VH2 1401 aa28.49■■■□□ 2.15
ECHDC2-208ENST00000476477 TOPBP1Q92547 1522 aa28.48■■■□□ 2.15
ECHDC2-208ENST00000476477 PDS5BQ9NTI5 1447 aa28.47■■■□□ 2.15
ECHDC2-208ENST00000476477 CEP162Q5TB80 1403 aa28.46■■■□□ 2.15
ECHDC2-208ENST00000476477 RAPGEF2Q9Y4G8 1499 aa28.44■■■□□ 2.14
ECHDC2-208ENST00000476477 KIF21AQ7Z4S6 1674 aa28.42■■■□□ 2.14
ECHDC2-208ENST00000476477 CUX2O14529 1486 aa28.41■■■□□ 2.14
ECHDC2-208ENST00000476477 URB2Q14146 1524 aaKnown RBP28.41■■■□□ 2.14
ECHDC2-208ENST00000476477 PRXQ9BXM0 1461 aa28.39■■■□□ 2.14
ECHDC2-208ENST00000476477 POLA1P09884 1462 aaPredicted RBP28.36■■■□□ 2.13
ECHDC2-208ENST00000476477 ERICH3Q5RHP9 1530 aa28.33■■■□□ 2.13
ECHDC2-208ENST00000476477 RAD54L2Q9Y4B4 1467 aa28.33■■■□□ 2.13
ECHDC2-208ENST00000476477 PCGF6Q9BYE7 350 aa28.32■■■□□ 2.12
ECHDC2-208ENST00000476477 ABCA10Q8WWZ4 1543 aa28.26■■■□□ 2.11
ECHDC2-208ENST00000476477 IGF1RP08069 1367 aa28.25■■■□□ 2.11
ECHDC2-208ENST00000476477 TRIM26Q12899 539 aaPredicted RBP28.18■■■□□ 2.1
ECHDC2-208ENST00000476477 WDR97A6NE52 1622 aa28.17■■■□□ 2.1
ECHDC2-208ENST00000476477 CLIP1P30622 1438 aa28.17■■■□□ 2.1
ECHDC2-208ENST00000476477 MRC2Q9UBG0 1479 aa28.13■■■□□ 2.09
ECHDC2-208ENST00000476477 CARMIL1Q5VZK9 1371 aa28.11■■■□□ 2.09
ECHDC2-208ENST00000476477 PPARGC1BQ86YN6 1023 aaKnown RBP28.07■■■□□ 2.08
ECHDC2-208ENST00000476477 RANGAP1P46060 587 aaPredicted RBP28.04■■■□□ 2.08
ECHDC2-208ENST00000476477 ABCA5Q8WWZ7 1642 aa28.03■■■□□ 2.08
ECHDC2-208ENST00000476477 TARBP1Q13395 1621 aaKnown RBP28.02■■■□□ 2.08
ECHDC2-208ENST00000476477 TDRD9Q8NDG6 1382 aaKnown RBP28■■■□□ 2.07
ECHDC2-208ENST00000476477 WDR62O43379 1518 aa27.97■■■□□ 2.07
ECHDC2-208ENST00000476477 CUL7Q14999 1698 aa27.96■■■□□ 2.07
ECHDC2-208ENST00000476477 GAPVD1Q14C86 1478 aa27.94■■■□□ 2.06
ECHDC2-208ENST00000476477 VPS8Q8N3P4 1428 aa27.94■■■□□ 2.06
ECHDC2-208ENST00000476477 ERCC6Q03468 1493 aa27.94■■■□□ 2.06
ECHDC2-208ENST00000476477 ARAP1Q96P48 1450 aa27.91■■■□□ 2.06
ECHDC2-208ENST00000476477 THOC2Q8NI27 1593 aaKnown RBP27.86■■■□□ 2.05
ECHDC2-208ENST00000476477 ARHGAP35Q9NRY4 1499 aa27.83■■■□□ 2.05
ECHDC2-208ENST00000476477 IFT140Q96RY7 1462 aa27.81■■■□□ 2.04
ECHDC2-208ENST00000476477 TTBK1Q5TCY1 1321 aaPredicted RBP27.8■■■□□ 2.04
ECHDC2-208ENST00000476477 PBRM1Q86U86 1689 aa27.79■■■□□ 2.04
ECHDC2-208ENST00000476477 AQRO60306 1485 aaKnown RBP eCLIP27.79■■■□□ 2.043e-6■■■□□ 18.1
ECHDC2-208ENST00000476477 ZNF608Q9ULD9 1512 aaPredicted RBP27.73■■■□□ 2.03
ECHDC2-208ENST00000476477 CTTNBP2Q8WZ74 1663 aa27.72■■■□□ 2.03
ECHDC2-208ENST00000476477 HRCP23327 699 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms