RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 MYO5BQ9ULV0 1848 aa23.88■■□□□ 1.41
ITGB1-210ENST00000474568 SPHKAPQ2M3C7 1700 aa23.87■■□□□ 1.41
ITGB1-210ENST00000474568 CPS1P31327 1500 aa23.87■■□□□ 1.41
ITGB1-210ENST00000474568 IQSEC2Q5JU85 1478 aa23.87■■□□□ 1.41
ITGB1-210ENST00000474568 UBAP1LF5GYI3 381 aa23.86■■□□□ 1.41
ITGB1-210ENST00000474568 HDGFP51858 240 aaKnown RBP23.86■■□□□ 1.41
ITGB1-210ENST00000474568 ZNF326Q5BKZ1 582 aaKnown RBP23.86■■□□□ 1.41
ITGB1-210ENST00000474568 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.84■■□□□ 1.41
ITGB1-210ENST00000474568 MPHOSPH9Q99550 1183 aa23.84■■□□□ 1.41
ITGB1-210ENST00000474568 TRPM2O94759 1503 aa23.84■■□□□ 1.41
ITGB1-210ENST00000474568 RAB3GAP2Q9H2M9 1393 aa23.82■■□□□ 1.4
ITGB1-210ENST00000474568 PLEKHG1Q9ULL1 1385 aa23.82■■□□□ 1.4
ITGB1-210ENST00000474568 CLTCL1P53675 1640 aa23.82■■□□□ 1.4
ITGB1-210ENST00000474568 STRCP1A6NGW2 1772 aa23.8■■□□□ 1.4
ITGB1-210ENST00000474568 LRRC7Q96NW7 1537 aa23.79■■□□□ 1.4
ITGB1-210ENST00000474568 SCAF1Q9H7N4 1312 aaKnown RBP23.77■■□□□ 1.4
ITGB1-210ENST00000474568 KCNA6P17658 529 aa23.76■■□□□ 1.39
ITGB1-210ENST00000474568 PIP4K2BP78356 416 aa23.75■■□□□ 1.39
ITGB1-210ENST00000474568 RBM33Q96EV2 1170 aaKnown RBP23.75■■□□□ 1.39
ITGB1-210ENST00000474568 TOM1O60784 492 aa23.72■■□□□ 1.39
ITGB1-210ENST00000474568 TBX22Q9Y458 520 aa23.72■■□□□ 1.39
ITGB1-210ENST00000474568 ADAMTS13Q76LX8 1427 aa23.72■■□□□ 1.39
ITGB1-210ENST00000474568 PROSER2Q86WR7 435 aaPredicted RBP23.71■■□□□ 1.39
ITGB1-210ENST00000474568 CCDC144AA2RUR9 1427 aa23.69■■□□□ 1.38
ITGB1-210ENST00000474568 TMEM94Q12767 1356 aa23.69■■□□□ 1.38
ITGB1-210ENST00000474568 ACIN1Q9UKV3 1341 aaKnown RBP23.68■■□□□ 1.38
ITGB1-210ENST00000474568 NEXMIFQ5QGS0 1516 aa23.68■■□□□ 1.38
ITGB1-210ENST00000474568 KIF1BO60333 1816 aa23.67■■□□□ 1.38
ITGB1-210ENST00000474568 RGL3Q3MIN7 710 aa23.66■■□□□ 1.38
ITGB1-210ENST00000474568 NWD1Q149M9 1564 aa23.64■■□□□ 1.37
ITGB1-210ENST00000474568 NKTRP30414 1462 aaKnown RBP23.62■■□□□ 1.37
ITGB1-210ENST00000474568 DIP2AQ14689 1571 aa23.62■■□□□ 1.37
ITGB1-210ENST00000474568 VGFO15240 615 aaPredicted RBP23.61■■□□□ 1.37
ITGB1-210ENST00000474568 AMOTL2Q9Y2J4 779 aa23.61■■□□□ 1.37
ITGB1-210ENST00000474568 ALKQ9UM73 1620 aa23.61■■□□□ 1.37
ITGB1-210ENST00000474568 RPGRIP1LQ68CZ1 1315 aa23.6■■□□□ 1.37
ITGB1-210ENST00000474568 PTPRUQ92729 1446 aa23.6■■□□□ 1.37
ITGB1-210ENST00000474568 NRXN3Q9Y4C0 1643 aa23.6■■□□□ 1.37
ITGB1-210ENST00000474568 SETBP1Q9Y6X0 1596 aa23.6■■□□□ 1.37
ITGB1-210ENST00000474568 METP08581 1390 aa23.59■■□□□ 1.37
ITGB1-210ENST00000474568 PIK3R4Q99570 1358 aa23.58■■□□□ 1.37
ITGB1-210ENST00000474568 C14orf37Q86TY3 774 aa23.58■■□□□ 1.37
ITGB1-210ENST00000474568 XIRP1Q702N8 1843 aaKnown RBP23.58■■□□□ 1.37
ITGB1-210ENST00000474568 SPATA31E1Q6ZUB1 1445 aa23.58■■□□□ 1.36
ITGB1-210ENST00000474568 CHD2O14647 1828 aaKnown RBP23.57■■□□□ 1.36
ITGB1-210ENST00000474568 HRCP23327 699 aa23.57■■□□□ 1.36
ITGB1-210ENST00000474568 HSPA1LP34931 641 aa23.57■■□□□ 1.36
ITGB1-210ENST00000474568 ADGRF5Q8IZF2 1346 aa23.55■■□□□ 1.36
ITGB1-210ENST00000474568 MSH6P52701 1360 aa23.54■■□□□ 1.36
ITGB1-210ENST00000474568 ANKRD30BQ9BXX2 1392 aa23.52■■□□□ 1.36
ITGB1-210ENST00000474568 PPLO60437 1756 aa23.5■■□□□ 1.35
ITGB1-210ENST00000474568 XRN1Q8IZH2 1706 aaKnown RBP23.45■■□□□ 1.34
ITGB1-210ENST00000474568 NCOA3Q9Y6Q9 1424 aa23.44■■□□□ 1.34
ITGB1-210ENST00000474568 ATF3P18847 181 aa23.43■■□□□ 1.34
ITGB1-210ENST00000474568 C19orf44Q9H6X5 657 aa23.43■■□□□ 1.34
ITGB1-210ENST00000474568 SLAIN2Q9P270 581 aa23.43■■□□□ 1.34
ITGB1-210ENST00000474568 TMEM132EQ6IEE7 984 aa23.41■■□□□ 1.34
ITGB1-210ENST00000474568 STK26Q9P289 416 aa23.41■■□□□ 1.34
ITGB1-210ENST00000474568 SETD1AO15047 1707 aaKnown RBP23.41■■□□□ 1.34
ITGB1-210ENST00000474568 FAM135BQ49AJ0 1406 aa23.41■■□□□ 1.34
ITGB1-210ENST00000474568 ROBO2Q9HCK4 1378 aa23.4■■□□□ 1.34
ITGB1-210ENST00000474568 IFT172Q9UG01 1749 aa23.4■■□□□ 1.34
ITGB1-210ENST00000474568 KDM2AQ9Y2K7 1162 aa23.4■■□□□ 1.34
ITGB1-210ENST00000474568 CADPS2Q86UW7 1296 aa23.39■■□□□ 1.33
ITGB1-210ENST00000474568 PIK3C2GO75747 1445 aa23.39■■□□□ 1.33
ITGB1-210ENST00000474568 DISP3Q9P2K9 1392 aa23.38■■□□□ 1.33
ITGB1-210ENST00000474568 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.36■■□□□ 1.33
ITGB1-210ENST00000474568 ROBO1Q9Y6N7 1651 aa23.36■■□□□ 1.33
ITGB1-210ENST00000474568 CFAP70Q5T0N1 1121 aa23.36■■□□□ 1.33
ITGB1-210ENST00000474568 DCAF11Q8TEB1 546 aa23.36■■□□□ 1.33
ITGB1-210ENST00000474568 PTCH1Q13635 1447 aa23.35■■□□□ 1.33
ITGB1-210ENST00000474568 MYOM2P54296 1465 aa23.35■■□□□ 1.33
ITGB1-210ENST00000474568 TRIM26Q12899 539 aaPredicted RBP23.34■■□□□ 1.33
ITGB1-210ENST00000474568 ADGRL3Q9HAR2 1447 aa23.33■■□□□ 1.33
ITGB1-210ENST00000474568 ASXL1Q8IXJ9 1541 aa23.33■■□□□ 1.33
ITGB1-210ENST00000474568 C14orf93Q9H972 538 aaKnown RBP23.33■■□□□ 1.33
ITGB1-210ENST00000474568 NRXN1Q9ULB1 1477 aa23.32■■□□□ 1.32
ITGB1-210ENST00000474568 LRPPRCP42704 1394 aaKnown RBP23.32■■□□□ 1.32
ITGB1-210ENST00000474568 WAPLQ7Z5K2 1190 aa23.31■■□□□ 1.32
ITGB1-210ENST00000474568 DHX57Q6P158 1386 aaKnown RBP23.3■■□□□ 1.32
ITGB1-210ENST00000474568 DCCP43146 1447 aa23.3■■□□□ 1.32
ITGB1-210ENST00000474568 MST1RQ04912 1400 aa23.28■■□□□ 1.32
ITGB1-210ENST00000474568 PRAG1Q86YV5 1406 aa23.28■■□□□ 1.32
ITGB1-210ENST00000474568 YTHDC2Q9H6S0 1430 aaKnown RBP23.28■■□□□ 1.32
ITGB1-210ENST00000474568 NALCNQ8IZF0 1738 aa23.28■■□□□ 1.32
ITGB1-210ENST00000474568 PLEKHH1Q9ULM0 1364 aa23.27■■□□□ 1.32
ITGB1-210ENST00000474568 BRINP3Q76B58 766 aa23.27■■□□□ 1.32
ITGB1-210ENST00000474568 ABCC11Q96J66 1382 aa23.27■■□□□ 1.31
ITGB1-210ENST00000474568 SIN3AQ96ST3 1273 aa23.25■■□□□ 1.31
ITGB1-210ENST00000474568 TECPR2O15040 1411 aa23.25■■□□□ 1.31
ITGB1-210ENST00000474568 MED1Q15648 1581 aaPredicted RBP23.23■■□□□ 1.31
ITGB1-210ENST00000474568 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
ITGB1-210ENST00000474568 SAFB2Q14151 953 aaKnown RBP eCLIP23.22■■□□□ 1.31
ITGB1-210ENST00000474568 DDX17Q92841 729 aaKnown RBP23.21■■□□□ 1.31
ITGB1-210ENST00000474568 PHLPP1O60346 1717 aa23.21■■□□□ 1.31
ITGB1-210ENST00000474568 LAMC1P11047 1609 aa23.2■■□□□ 1.3
ITGB1-210ENST00000474568 C1orf167Q5SNV9 1468 aa23.2■■□□□ 1.3
ITGB1-210ENST00000474568 NUTM2FA1L443 756 aa23.2■■□□□ 1.3
ITGB1-210ENST00000474568 TRAK1Q9UPV9 953 aa23.2■■□□□ 1.3
ITGB1-210ENST00000474568 PRAM1Q96QH2 718 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms