RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 RGL3Q3MIN7 710 aa26.48■■□□□ 1.83
SNRPB-203ENST00000474384 ZFYVE9O95405 1425 aa26.48■■□□□ 1.83
SNRPB-203ENST00000474384 HDGFP51858 240 aaKnown RBP26.47■■□□□ 1.83
SNRPB-203ENST00000474384 DMRT2Q9Y5R5 561 aa26.47■■□□□ 1.83
SNRPB-203ENST00000474384 SPATA31E1Q6ZUB1 1445 aa26.47■■□□□ 1.83
SNRPB-203ENST00000474384 NEURL4Q96JN8 1562 aa26.46■■□□□ 1.83
SNRPB-203ENST00000474384 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.45■■□□□ 1.82
SNRPB-203ENST00000474384 PPP1R15AO75807 674 aaPredicted RBP26.44■■□□□ 1.82
SNRPB-203ENST00000474384 MED14O60244 1454 aa26.43■■□□□ 1.82
SNRPB-203ENST00000474384 NPHP4O75161 1426 aaPredicted RBP26.43■■□□□ 1.82
SNRPB-203ENST00000474384 SENP3Q9H4L4 574 aaPredicted RBP26.43■■□□□ 1.82
SNRPB-203ENST00000474384 SIN3AQ96ST3 1273 aa26.42■■□□□ 1.82
SNRPB-203ENST00000474384 RPGRIP1LQ68CZ1 1315 aa26.41■■□□□ 1.82
SNRPB-203ENST00000474384 NEXMIFQ5QGS0 1516 aa26.4■■□□□ 1.82
SNRPB-203ENST00000474384 BCANQ96GW7 911 aa26.39■■□□□ 1.82
SNRPB-203ENST00000474384 IQGAP1P46940 1657 aa26.38■■□□□ 1.81
SNRPB-203ENST00000474384 NEUROD1Q13562 356 aa26.37■■□□□ 1.81
SNRPB-203ENST00000474384 PLEKHG1Q9ULL1 1385 aa26.36■■□□□ 1.81
SNRPB-203ENST00000474384 VGFO15240 615 aaPredicted RBP26.35■■□□□ 1.81
SNRPB-203ENST00000474384 PPLO60437 1756 aa26.35■■□□□ 1.81
SNRPB-203ENST00000474384 SLC26A8Q96RN1 970 aa26.32■■□□□ 1.8
SNRPB-203ENST00000474384 IFT172Q9UG01 1749 aa26.31■■□□□ 1.8
SNRPB-203ENST00000474384 CCER1Q8TC90 406 aaPredicted RBP26.29■■□□□ 1.8
SNRPB-203ENST00000474384 DCAF11Q8TEB1 546 aa26.29■■□□□ 1.8
SNRPB-203ENST00000474384 ADGRF5Q8IZF2 1346 aa26.29■■□□□ 1.8
SNRPB-203ENST00000474384 KDM2AQ9Y2K7 1162 aa26.27■■□□□ 1.8
SNRPB-203ENST00000474384 ADAMTS13Q76LX8 1427 aa26.25■■□□□ 1.79
SNRPB-203ENST00000474384 ZNF335Q9H4Z2 1342 aaPredicted RBP26.24■■□□□ 1.79
SNRPB-203ENST00000474384 TBX22Q9Y458 520 aa26.24■■□□□ 1.79
SNRPB-203ENST00000474384 SETBP1Q9Y6X0 1596 aa26.24■■□□□ 1.79
SNRPB-203ENST00000474384 NRXN3Q9Y4C0 1643 aa26.23■■□□□ 1.79
SNRPB-203ENST00000474384 L3MBTL2Q969R5 705 aa26.22■■□□□ 1.79
SNRPB-203ENST00000474384 MYOM2P54296 1465 aa26.22■■□□□ 1.79
SNRPB-203ENST00000474384 CLSPNQ9HAW4 1339 aa26.21■■□□□ 1.79
SNRPB-203ENST00000474384 STAC3Q96MF2 364 aa26.19■■□□□ 1.78
SNRPB-203ENST00000474384 DIP2AQ14689 1571 aa26.18■■□□□ 1.78
SNRPB-203ENST00000474384 NRXN1Q9ULB1 1477 aa26.17■■□□□ 1.78
SNRPB-203ENST00000474384 PIK3C2GO75747 1445 aa26.17■■□□□ 1.78
SNRPB-203ENST00000474384 ALKQ9UM73 1620 aa26.17■■□□□ 1.78
SNRPB-203ENST00000474384 METP08581 1390 aa26.15■■□□□ 1.78
SNRPB-203ENST00000474384 TONSLQ96HA7 1378 aa26.15■■□□□ 1.78
SNRPB-203ENST00000474384 LTBP4Q8N2S1 1624 aa26.14■■□□□ 1.77
SNRPB-203ENST00000474384 STRCP1A6NGW2 1772 aa26.13■■□□□ 1.77
SNRPB-203ENST00000474384 KCNA6P17658 529 aa26.13■■□□□ 1.77
SNRPB-203ENST00000474384 CFAP70Q5T0N1 1121 aa26.12■■□□□ 1.77
SNRPB-203ENST00000474384 C14orf93Q9H972 538 aaKnown RBP26.12■■□□□ 1.77
SNRPB-203ENST00000474384 SETD1AO15047 1707 aaKnown RBP26.11■■□□□ 1.77
SNRPB-203ENST00000474384 PIK3R4Q99570 1358 aa26.11■■□□□ 1.77
SNRPB-203ENST00000474384 CHD2O14647 1828 aaKnown RBP26.11■■□□□ 1.77
SNRPB-203ENST00000474384 PTPRUQ92729 1446 aa26.1■■□□□ 1.77
SNRPB-203ENST00000474384 AMOTL2Q9Y2J4 779 aa26.09■■□□□ 1.77
SNRPB-203ENST00000474384 TMEM132EQ6IEE7 984 aa26.07■■□□□ 1.76
SNRPB-203ENST00000474384 CPS1P31327 1500 aa26.06■■□□□ 1.76
SNRPB-203ENST00000474384 ILDR1Q86SU0 546 aaPredicted RBP26.06■■□□□ 1.76
SNRPB-203ENST00000474384 NWD1Q149M9 1564 aa26.06■■□□□ 1.76
SNRPB-203ENST00000474384 PRAG1Q86YV5 1406 aa26.05■■□□□ 1.76
SNRPB-203ENST00000474384 LAMC1P11047 1609 aa26.04■■□□□ 1.76
SNRPB-203ENST00000474384 CERKQ8TCT0 537 aa26.04■■□□□ 1.76
SNRPB-203ENST00000474384 PROSER2Q86WR7 435 aaPredicted RBP26.03■■□□□ 1.76
SNRPB-203ENST00000474384 ASXL1Q8IXJ9 1541 aa26.02■■□□□ 1.76
SNRPB-203ENST00000474384 RBM33Q96EV2 1170 aaKnown RBP26.01■■□□□ 1.75
SNRPB-203ENST00000474384 LRRC7Q96NW7 1537 aa26.01■■□□□ 1.75
SNRPB-203ENST00000474384 STK26Q9P289 416 aa26.01■■□□□ 1.75
SNRPB-203ENST00000474384 XRN1Q8IZH2 1706 aaKnown RBP26■■□□□ 1.75
SNRPB-203ENST00000474384 NKTRP30414 1462 aaKnown RBP26■■□□□ 1.75
SNRPB-203ENST00000474384 NBPF8Q3BBV2 869 aa26■■□□□ 1.75
SNRPB-203ENST00000474384 TIMELESSQ9UNS1 1208 aa26■■□□□ 1.75
SNRPB-203ENST00000474384 YTHDC2Q9H6S0 1430 aaKnown RBP25.97■■□□□ 1.75
SNRPB-203ENST00000474384 LRPPRCP42704 1394 aaKnown RBP25.97■■□□□ 1.75
SNRPB-203ENST00000474384 NBPF1Q3BBV0 1214 aa25.97■■□□□ 1.75
SNRPB-203ENST00000474384 TMEM94Q12767 1356 aa25.96■■□□□ 1.75
SNRPB-203ENST00000474384 ADGRB1O14514 1584 aa25.96■■□□□ 1.75
SNRPB-203ENST00000474384 KIAA1210Q9ULL0 1709 aa25.96■■□□□ 1.75
SNRPB-203ENST00000474384 ABCC11Q96J66 1382 aa25.94■■□□□ 1.74
SNRPB-203ENST00000474384 ROBO2Q9HCK4 1378 aa25.94■■□□□ 1.74
SNRPB-203ENST00000474384 XIRP1Q702N8 1843 aaKnown RBP25.93■■□□□ 1.74
SNRPB-203ENST00000474384 TRPM1Q7Z4N2 1603 aa25.92■■□□□ 1.74
SNRPB-203ENST00000474384 TECPR2O15040 1411 aa25.9■■□□□ 1.74
SNRPB-203ENST00000474384 PTCH1Q13635 1447 aa25.9■■□□□ 1.74
SNRPB-203ENST00000474384 TRAK1Q9UPV9 953 aa25.9■■□□□ 1.74
SNRPB-203ENST00000474384 C14orf37Q86TY3 774 aa25.89■■□□□ 1.74
SNRPB-203ENST00000474384 IQSEC2Q5JU85 1478 aa25.89■■□□□ 1.73
SNRPB-203ENST00000474384 KNDC1Q76NI1 1749 aa25.88■■□□□ 1.73
SNRPB-203ENST00000474384 WAPLQ7Z5K2 1190 aa25.88■■□□□ 1.73
SNRPB-203ENST00000474384 ROCK2O75116 1388 aaKnown RBP25.86■■□□□ 1.73
SNRPB-203ENST00000474384 SIRT1Q96EB6 747 aa25.86■■□□□ 1.73
SNRPB-203ENST00000474384 NCOA3Q9Y6Q9 1424 aa25.85■■□□□ 1.73
SNRPB-203ENST00000474384 PLEKHH1Q9ULM0 1364 aa25.84■■□□□ 1.73
SNRPB-203ENST00000474384 PRAM1Q96QH2 718 aa25.83■■□□□ 1.73
SNRPB-203ENST00000474384 DLC1Q96QB1 1528 aa25.83■■□□□ 1.72
SNRPB-203ENST00000474384 FAM135BQ49AJ0 1406 aa25.82■■□□□ 1.72
SNRPB-203ENST00000474384 POGKQ9P215 609 aa25.82■■□□□ 1.72
SNRPB-203ENST00000474384 RALGAPBQ86X10 1494 aa25.82■■□□□ 1.72
SNRPB-203ENST00000474384 MSH6P52701 1360 aa25.82■■□□□ 1.72
SNRPB-203ENST00000474384 SAFB2Q14151 953 aaKnown RBP eCLIP25.81■■□□□ 1.72
SNRPB-203ENST00000474384 C19orf44Q9H6X5 657 aa25.81■■□□□ 1.72
SNRPB-203ENST00000474384 UBAP1LF5GYI3 381 aa25.79■■□□□ 1.72
SNRPB-203ENST00000474384 CARD11Q9BXL7 1154 aa25.79■■□□□ 1.72
SNRPB-203ENST00000474384 GPRASP1Q5JY77 1395 aa25.79■■□□□ 1.72
SNRPB-203ENST00000474384 ADGRL3Q9HAR2 1447 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms