RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
CASC3-204ENST00000474190 NEXMIFQ5QGS0 1516 aa15.15■□□□□ 0.02
CASC3-204ENST00000474190 RIMS2Q9UQ26 1411 aa15.15■□□□□ 0.02
CASC3-204ENST00000474190 CHGAP10645 457 aaKnown RBP15.13■□□□□ 0.01
CASC3-204ENST00000474190 RGL3Q3MIN7 710 aa15.13■□□□□ 0.01
CASC3-204ENST00000474190 CCER1Q8TC90 406 aaPredicted RBP15.13■□□□□ 0.01
CASC3-204ENST00000474190 L3MBTL2Q969R5 705 aa15.13■□□□□ 0.01
CASC3-204ENST00000474190 NCKAP5LQ9HCH0 1330 aa15.13■□□□□ 0.01
CASC3-204ENST00000474190 NEUROD1Q13562 356 aa15.12■□□□□ 0.01
CASC3-204ENST00000474190 NUTM2DQ5VT03 806 aaPredicted RBP15.12■□□□□ 0.01
CASC3-204ENST00000474190 NRXN1Q9ULB1 1477 aa15.12■□□□□ 0.01
CASC3-204ENST00000474190 RPGRIP1LQ68CZ1 1315 aa15.12■□□□□ 0.01
CASC3-204ENST00000474190 ADGRF5Q8IZF2 1346 aa15.12■□□□□ 0.01
CASC3-204ENST00000474190 MED14O60244 1454 aa15.11■□□□□ 0.01
CASC3-204ENST00000474190 SCAF11Q99590 1463 aaKnown RBP15.1■□□□□ 0.01
CASC3-204ENST00000474190 TXNDC2Q86VQ3 553 aa15.1■□□□□ 0.01
CASC3-204ENST00000474190 STAG3Q9UJ98 1225 aa15.1■□□□□ 0.01
CASC3-204ENST00000474190 MYO5BQ9ULV0 1848 aa15.1■□□□□ 0.01
CASC3-204ENST00000474190 ADAMTS13Q76LX8 1427 aa15.09■□□□□ 0.01
CASC3-204ENST00000474190 ZNF326Q5BKZ1 582 aaKnown RBP15.08■□□□□ 0
CASC3-204ENST00000474190 ANKLE2Q86XL3 938 aa15.08■□□□□ 0
CASC3-204ENST00000474190 PLEKHG1Q9ULL1 1385 aa15.08■□□□□ 0
CASC3-204ENST00000474190 MYOM2P54296 1465 aa15.08■□□□□ 0
CASC3-204ENST00000474190 DCAF11Q8TEB1 546 aa15.06■□□□□ 0
CASC3-204ENST00000474190 PIK3C2GO75747 1445 aa15.06■□□□□ 0
CASC3-204ENST00000474190 NBPF8Q3BBV2 869 aa15.05■□□□□ -0
CASC3-204ENST00000474190 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.05■□□□□ -0
CASC3-204ENST00000474190 NPHP4O75161 1426 aaPredicted RBP15.05■□□□□ -0
CASC3-204ENST00000474190 NRXN3Q9Y4C0 1643 aa15.05■□□□□ -0
CASC3-204ENST00000474190 IFT172Q9UG01 1749 aa15.05■□□□□ -0
CASC3-204ENST00000474190 KIF1BO60333 1816 aa15.05■□□□□ -0
CASC3-204ENST00000474190 PPLO60437 1756 aa15.03■□□□□ -0
CASC3-204ENST00000474190 MED1Q15648 1581 aaPredicted RBP15.03■□□□□ -0
CASC3-204ENST00000474190 SETBP1Q9Y6X0 1596 aa15.03■□□□□ -0
CASC3-204ENST00000474190 PRAG1Q86YV5 1406 aa15.03■□□□□ -0
CASC3-204ENST00000474190 VGFO15240 615 aaPredicted RBP15.03■□□□□ -0
CASC3-204ENST00000474190 SENP3Q9H4L4 574 aaPredicted RBP15.02■□□□□ -0
CASC3-204ENST00000474190 KDM2AQ9Y2K7 1162 aa15.02■□□□□ -0
CASC3-204ENST00000474190 EID1Q9Y6B2 187 aa15.02■□□□□ -0
CASC3-204ENST00000474190 METP08581 1390 aa15.01□□□□□ -0.01
CASC3-204ENST00000474190 PPP1R15AO75807 674 aaPredicted RBP15.01□□□□□ -0.01
CASC3-204ENST00000474190 STAC3Q96MF2 364 aa15.01□□□□□ -0.01
CASC3-204ENST00000474190 C14orf93Q9H972 538 aaKnown RBP15.01□□□□□ -0.01
CASC3-204ENST00000474190 TIMELESSQ9UNS1 1208 aa15.01□□□□□ -0.01
CASC3-204ENST00000474190 ASXL1Q8IXJ9 1541 aa15.01□□□□□ -0.01
CASC3-204ENST00000474190 CFAP70Q5T0N1 1121 aa15□□□□□ -0.01
CASC3-204ENST00000474190 SLC26A8Q96RN1 970 aa15□□□□□ -0.01
CASC3-204ENST00000474190 PTPRUQ92729 1446 aa15□□□□□ -0.01
CASC3-204ENST00000474190 TONSLQ96HA7 1378 aa14.99□□□□□ -0.01
CASC3-204ENST00000474190 TBX22Q9Y458 520 aa14.99□□□□□ -0.01
CASC3-204ENST00000474190 ZNF335Q9H4Z2 1342 aaPredicted RBP14.98□□□□□ -0.01
CASC3-204ENST00000474190 HDGFP51858 240 aaKnown RBP14.98□□□□□ -0.01
CASC3-204ENST00000474190 ADGRB1O14514 1584 aa14.98□□□□□ -0.01
CASC3-204ENST00000474190 ALKQ9UM73 1620 aa14.97□□□□□ -0.01
CASC3-204ENST00000474190 UBAP1LF5GYI3 381 aa14.97□□□□□ -0.01
CASC3-204ENST00000474190 NBPF1Q3BBV0 1214 aa14.97□□□□□ -0.01
CASC3-204ENST00000474190 SETD1AO15047 1707 aaKnown RBP14.97□□□□□ -0.01
CASC3-204ENST00000474190 POLR1AO95602 1720 aaPredicted RBP14.96□□□□□ -0.01
CASC3-204ENST00000474190 IQGAP1P46940 1657 aa14.96□□□□□ -0.01
CASC3-204ENST00000474190 GPRASP1Q5JY77 1395 aa14.94□□□□□ -0.02
CASC3-204ENST00000474190 TMEM132EQ6IEE7 984 aa14.93□□□□□ -0.02
CASC3-204ENST00000474190 PIK3R4Q99570 1358 aa14.92□□□□□ -0.02
CASC3-204ENST00000474190 DIP2AQ14689 1571 aa14.92□□□□□ -0.02
CASC3-204ENST00000474190 RALGAPBQ86X10 1494 aa14.9□□□□□ -0.02
CASC3-204ENST00000474190 LRPPRCP42704 1394 aaKnown RBP14.9□□□□□ -0.02
CASC3-204ENST00000474190 KCNA6P17658 529 aa14.9□□□□□ -0.02
CASC3-204ENST00000474190 TECPR2O15040 1411 aa14.9□□□□□ -0.02
CASC3-204ENST00000474190 ABCC11Q96J66 1382 aa14.89□□□□□ -0.03
CASC3-204ENST00000474190 ROBO2Q9HCK4 1378 aa14.89□□□□□ -0.03
CASC3-204ENST00000474190 NWD1Q149M9 1564 aa14.89□□□□□ -0.03
CASC3-204ENST00000474190 AMOTL2Q9Y2J4 779 aa14.88□□□□□ -0.03
CASC3-204ENST00000474190 YTHDC2Q9H6S0 1430 aaKnown RBP14.88□□□□□ -0.03
CASC3-204ENST00000474190 TRPM1Q7Z4N2 1603 aa14.88□□□□□ -0.03
CASC3-204ENST00000474190 STRCP1A6NGW2 1772 aa14.88□□□□□ -0.03
CASC3-204ENST00000474190 XRN1Q8IZH2 1706 aaKnown RBP14.87□□□□□ -0.03
CASC3-204ENST00000474190 HSPA1LP34931 641 aa14.87□□□□□ -0.03
CASC3-204ENST00000474190 BCANQ96GW7 911 aa14.87□□□□□ -0.03
CASC3-204ENST00000474190 PLEKHH1Q9ULM0 1364 aa14.85□□□□□ -0.03
CASC3-204ENST00000474190 KIAA1210Q9ULL0 1709 aa14.85□□□□□ -0.03
CASC3-204ENST00000474190 PTCH1Q13635 1447 aa14.84□□□□□ -0.03
CASC3-204ENST00000474190 SCAF1Q9H7N4 1312 aaKnown RBP14.84□□□□□ -0.03
CASC3-204ENST00000474190 LAMC1P11047 1609 aa14.84□□□□□ -0.03
CASC3-204ENST00000474190 ROCK2O75116 1388 aaKnown RBP14.84□□□□□ -0.03
CASC3-204ENST00000474190 LRRC7Q96NW7 1537 aa14.83□□□□□ -0.04
CASC3-204ENST00000474190 SIRT1Q96EB6 747 aa14.83□□□□□ -0.04
CASC3-204ENST00000474190 RBM33Q96EV2 1170 aaKnown RBP14.83□□□□□ -0.04
CASC3-204ENST00000474190 CHD2O14647 1828 aaKnown RBP14.82□□□□□ -0.04
CASC3-204ENST00000474190 DLC1Q96QB1 1528 aa14.82□□□□□ -0.04
CASC3-204ENST00000474190 PIP4K2BP78356 416 aa14.82□□□□□ -0.04
CASC3-204ENST00000474190 WAPLQ7Z5K2 1190 aa14.82□□□□□ -0.04
CASC3-204ENST00000474190 STK26Q9P289 416 aa14.82□□□□□ -0.04
CASC3-204ENST00000474190 NKTRP30414 1462 aaKnown RBP14.82□□□□□ -0.04
CASC3-204ENST00000474190 CPS1P31327 1500 aa14.82□□□□□ -0.04
CASC3-204ENST00000474190 TRAK1Q9UPV9 953 aa14.81□□□□□ -0.04
CASC3-204ENST00000474190 FAM135BQ49AJ0 1406 aa14.81□□□□□ -0.04
CASC3-204ENST00000474190 TMEM94Q12767 1356 aa14.8□□□□□ -0.04
CASC3-204ENST00000474190 CARD11Q9BXL7 1154 aa14.79□□□□□ -0.04
CASC3-204ENST00000474190 PRAM1Q96QH2 718 aa14.78□□□□□ -0.04
CASC3-204ENST00000474190 TESK2Q96S53 571 aa14.78□□□□□ -0.04
CASC3-204ENST00000474190 PHF23Q9BUL5 403 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms