RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 NEXMIFQ5QGS0 1516 aa29.23■■■□□ 2.27
HDAC7-220ENST00000471235 CCDC144AA2RUR9 1427 aa29.22■■■□□ 2.27
HDAC7-220ENST00000471235 IFT172Q9UG01 1749 aa29.22■■■□□ 2.27
HDAC7-220ENST00000471235 EID1Q9Y6B2 187 aa29.21■■■□□ 2.27
HDAC7-220ENST00000471235 LTBP4Q8N2S1 1624 aa29.2■■■□□ 2.27
HDAC7-220ENST00000471235 STRCP1A6NGW2 1772 aa29.19■■■□□ 2.26
HDAC7-220ENST00000471235 NRXN3Q9Y4C0 1643 aa29.15■■■□□ 2.26
HDAC7-220ENST00000471235 PLEKHG1Q9ULL1 1385 aa29.13■■■□□ 2.25
HDAC7-220ENST00000471235 ANKRD30BQ9BXX2 1392 aa29.13■■■□□ 2.25
HDAC7-220ENST00000471235 SPATA31E1Q6ZUB1 1445 aa29.12■■■□□ 2.25
HDAC7-220ENST00000471235 ZNF335Q9H4Z2 1342 aaPredicted RBP29.12■■■□□ 2.25
HDAC7-220ENST00000471235 DIP2AQ14689 1571 aa29.1■■■□□ 2.25
HDAC7-220ENST00000471235 ZNF326Q5BKZ1 582 aaKnown RBP29.1■■■□□ 2.25
HDAC7-220ENST00000471235 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.1■■■□□ 2.25
HDAC7-220ENST00000471235 PPP1R15AO75807 674 aaPredicted RBP29.09■■■□□ 2.25
HDAC7-220ENST00000471235 SETBP1Q9Y6X0 1596 aa29.09■■■□□ 2.25
HDAC7-220ENST00000471235 HDGFP51858 240 aaKnown RBP29.08■■■□□ 2.25
HDAC7-220ENST00000471235 NUTM2DQ5VT03 806 aaPredicted RBP29.08■■■□□ 2.25
HDAC7-220ENST00000471235 CHD2O14647 1828 aaKnown RBP29.07■■■□□ 2.24
HDAC7-220ENST00000471235 SETD1AO15047 1707 aaKnown RBP29.06■■■□□ 2.24
HDAC7-220ENST00000471235 NWD1Q149M9 1564 aa29.05■■■□□ 2.24
HDAC7-220ENST00000471235 CPS1P31327 1500 aa29.04■■■□□ 2.24
HDAC7-220ENST00000471235 ADAMTS13Q76LX8 1427 aa29.03■■■□□ 2.24
HDAC7-220ENST00000471235 SENP3Q9H4L4 574 aaPredicted RBP29.02■■■□□ 2.24
HDAC7-220ENST00000471235 XIRP1Q702N8 1843 aaKnown RBP29.01■■■□□ 2.23
HDAC7-220ENST00000471235 SLC26A8Q96RN1 970 aa29■■■□□ 2.23
HDAC7-220ENST00000471235 RPGRIP1LQ68CZ1 1315 aa28.99■■■□□ 2.23
HDAC7-220ENST00000471235 BCANQ96GW7 911 aa28.98■■■□□ 2.23
HDAC7-220ENST00000471235 DHX57Q6P158 1386 aaKnown RBP28.98■■■□□ 2.23
HDAC7-220ENST00000471235 IQSEC2Q5JU85 1478 aa28.97■■■□□ 2.23
HDAC7-220ENST00000471235 CERKQ8TCT0 537 aa28.96■■■□□ 2.23
HDAC7-220ENST00000471235 RGL3Q3MIN7 710 aa28.95■■■□□ 2.22
HDAC7-220ENST00000471235 XRN1Q8IZH2 1706 aaKnown RBP28.93■■■□□ 2.22
HDAC7-220ENST00000471235 MYOM2P54296 1465 aa28.92■■■□□ 2.22
HDAC7-220ENST00000471235 ALKQ9UM73 1620 aa28.92■■■□□ 2.22
HDAC7-220ENST00000471235 LRRC7Q96NW7 1537 aa28.91■■■□□ 2.22
HDAC7-220ENST00000471235 TBX22Q9Y458 520 aa28.91■■■□□ 2.22
HDAC7-220ENST00000471235 NKTRP30414 1462 aaKnown RBP28.91■■■□□ 2.22
HDAC7-220ENST00000471235 VGFO15240 615 aaPredicted RBP28.9■■■□□ 2.22
HDAC7-220ENST00000471235 LAMC1P11047 1609 aa28.88■■■□□ 2.21
HDAC7-220ENST00000471235 PCGF6Q9BYE7 350 aa28.88■■■□□ 2.21
HDAC7-220ENST00000471235 NRXN1Q9ULB1 1477 aa28.87■■■□□ 2.21
HDAC7-220ENST00000471235 PIK3R4Q99570 1358 aa28.87■■■□□ 2.21
HDAC7-220ENST00000471235 ADGRF5Q8IZF2 1346 aa28.86■■■□□ 2.21
HDAC7-220ENST00000471235 PIK3C2GO75747 1445 aa28.86■■■□□ 2.21
HDAC7-220ENST00000471235 KCNA6P17658 529 aa28.85■■■□□ 2.21
HDAC7-220ENST00000471235 PTPRUQ92729 1446 aa28.85■■■□□ 2.21
HDAC7-220ENST00000471235 METP08581 1390 aa28.82■■■□□ 2.2
HDAC7-220ENST00000471235 ASXL1Q8IXJ9 1541 aa28.81■■■□□ 2.2
HDAC7-220ENST00000471235 KNDC1Q76NI1 1749 aa28.79■■■□□ 2.2
HDAC7-220ENST00000471235 TMEM94Q12767 1356 aa28.74■■■□□ 2.19
HDAC7-220ENST00000471235 SIN3AQ96ST3 1273 aa28.73■■■□□ 2.19
HDAC7-220ENST00000471235 FBXO41Q8TF61 875 aa28.72■■■□□ 2.19
HDAC7-220ENST00000471235 KIAA1210Q9ULL0 1709 aa28.72■■■□□ 2.19
HDAC7-220ENST00000471235 PRAG1Q86YV5 1406 aa28.71■■■□□ 2.19
HDAC7-220ENST00000471235 DCAF11Q8TEB1 546 aa28.71■■■□□ 2.19
HDAC7-220ENST00000471235 AMOTL2Q9Y2J4 779 aa28.71■■■□□ 2.19
HDAC7-220ENST00000471235 NALCNQ8IZF0 1738 aa28.71■■■□□ 2.19
HDAC7-220ENST00000471235 PROSER2Q86WR7 435 aaPredicted RBP28.7■■■□□ 2.18
HDAC7-220ENST00000471235 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.68■■■□□ 2.18
HDAC7-220ENST00000471235 PTCH1Q13635 1447 aa28.68■■■□□ 2.18
HDAC7-220ENST00000471235 KDM2AQ9Y2K7 1162 aa28.67■■■□□ 2.18
HDAC7-220ENST00000471235 RBM33Q96EV2 1170 aaKnown RBP28.66■■■□□ 2.18
HDAC7-220ENST00000471235 ADGRB1O14514 1584 aa28.66■■■□□ 2.18
HDAC7-220ENST00000471235 NEUROD1Q13562 356 aa28.64■■■□□ 2.18
HDAC7-220ENST00000471235 STAC3Q96MF2 364 aa28.64■■■□□ 2.18
HDAC7-220ENST00000471235 C14orf93Q9H972 538 aaKnown RBP28.64■■■□□ 2.18
HDAC7-220ENST00000471235 NCOA3Q9Y6Q9 1424 aa28.63■■■□□ 2.17
HDAC7-220ENST00000471235 TECPR2O15040 1411 aa28.62■■■□□ 2.17
HDAC7-220ENST00000471235 CFAP70Q5T0N1 1121 aa28.62■■■□□ 2.17
HDAC7-220ENST00000471235 ILDR1Q86SU0 546 aaPredicted RBP28.62■■■□□ 2.17
HDAC7-220ENST00000471235 LRPPRCP42704 1394 aaKnown RBP28.62■■■□□ 2.17
HDAC7-220ENST00000471235 UBAP1LF5GYI3 381 aa28.61■■■□□ 2.17
HDAC7-220ENST00000471235 ROBO2Q9HCK4 1378 aa28.61■■■□□ 2.17
HDAC7-220ENST00000471235 YTHDC2Q9H6S0 1430 aaKnown RBP28.6■■■□□ 2.17
HDAC7-220ENST00000471235 TRPM1Q7Z4N2 1603 aa28.59■■■□□ 2.17
HDAC7-220ENST00000471235 TMEM132EQ6IEE7 984 aa28.58■■■□□ 2.17
HDAC7-220ENST00000471235 L3MBTL2Q969R5 705 aa28.58■■■□□ 2.17
HDAC7-220ENST00000471235 MSH6P52701 1360 aa28.58■■■□□ 2.17
HDAC7-220ENST00000471235 ARHGEF28Q8N1W1 1705 aaKnown RBP28.57■■■□□ 2.16
HDAC7-220ENST00000471235 ADGRL3Q9HAR2 1447 aa28.55■■■□□ 2.16
HDAC7-220ENST00000471235 DLC1Q96QB1 1528 aa28.54■■■□□ 2.16
HDAC7-220ENST00000471235 ABCC11Q96J66 1382 aa28.54■■■□□ 2.16
HDAC7-220ENST00000471235 TOM1O60784 492 aa28.54■■■□□ 2.16
HDAC7-220ENST00000471235 STK26Q9P289 416 aa28.52■■■□□ 2.16
HDAC7-220ENST00000471235 DCCP43146 1447 aa28.52■■■□□ 2.16
HDAC7-220ENST00000471235 ROBO1Q9Y6N7 1651 aa28.51■■■□□ 2.16
HDAC7-220ENST00000471235 TONSLQ96HA7 1378 aa28.51■■■□□ 2.16
HDAC7-220ENST00000471235 C14orf37Q86TY3 774 aa28.51■■■□□ 2.15
HDAC7-220ENST00000471235 CDC42BPGQ6DT37 1551 aa28.49■■■□□ 2.15
HDAC7-220ENST00000471235 FAM135BQ49AJ0 1406 aa28.48■■■□□ 2.15
HDAC7-220ENST00000471235 CLSPNQ9HAW4 1339 aa28.46■■■□□ 2.15
HDAC7-220ENST00000471235 PIP4K2BP78356 416 aa28.46■■■□□ 2.15
HDAC7-220ENST00000471235 PLEKHH1Q9ULM0 1364 aa28.46■■■□□ 2.15
HDAC7-220ENST00000471235 C19orf44Q9H6X5 657 aa28.45■■■□□ 2.14
HDAC7-220ENST00000471235 SCAF1Q9H7N4 1312 aaKnown RBP28.44■■■□□ 2.14
HDAC7-220ENST00000471235 FMN2Q9NZ56 1722 aa28.44■■■□□ 2.14
HDAC7-220ENST00000471235 ADGRB2O60241 1585 aa28.41■■■□□ 2.14
HDAC7-220ENST00000471235 WAPLQ7Z5K2 1190 aa28.41■■■□□ 2.14
HDAC7-220ENST00000471235 MST1RQ04912 1400 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms