RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 STAG3Q9UJ98 1225 aa16.74■□□□□ 0.27
FN1-217ENST00000471193 NRXN1Q9ULB1 1477 aa16.73■□□□□ 0.27
FN1-217ENST00000471193 ZNF326Q5BKZ1 582 aaKnown RBP16.73■□□□□ 0.27
FN1-217ENST00000471193 RIMS2Q9UQ26 1411 aa16.72■□□□□ 0.27
FN1-217ENST00000471193 TMEM2Q9UHN6 1383 aa16.72■□□□□ 0.27
FN1-217ENST00000471193 PRAG1Q86YV5 1406 aa16.71■□□□□ 0.27
FN1-217ENST00000471193 DCAF11Q8TEB1 546 aa16.71■□□□□ 0.27
FN1-217ENST00000471193 PPP1R15AO75807 674 aaPredicted RBP16.7■□□□□ 0.26
FN1-217ENST00000471193 STAC3Q96MF2 364 aa16.7■□□□□ 0.26
FN1-217ENST00000471193 LMTK3Q96Q04 1460 aa16.69■□□□□ 0.26
FN1-217ENST00000471193 PIK3C2GO75747 1445 aa16.69■□□□□ 0.26
FN1-217ENST00000471193 TRPM1Q7Z4N2 1603 aa16.67■□□□□ 0.26
FN1-217ENST00000471193 THEMISQ8N1K5 641 aaPredicted RBP16.67■□□□□ 0.26
FN1-217ENST00000471193 RALGAPBQ86X10 1494 aa16.67■□□□□ 0.26
FN1-217ENST00000471193 KIAA1210Q9ULL0 1709 aa16.66■□□□□ 0.26
FN1-217ENST00000471193 KDM2AQ9Y2K7 1162 aa16.66■□□□□ 0.26
FN1-217ENST00000471193 LAMC1P11047 1609 aa16.66■□□□□ 0.26
FN1-217ENST00000471193 SCAF11Q99590 1463 aaKnown RBP16.66■□□□□ 0.26
FN1-217ENST00000471193 ADGRF5Q8IZF2 1346 aa16.66■□□□□ 0.26
FN1-217ENST00000471193 SETBP1Q9Y6X0 1596 aa16.65■□□□□ 0.26
FN1-217ENST00000471193 NBPF8Q3BBV2 869 aa16.65■□□□□ 0.26
FN1-217ENST00000471193 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.65■□□□□ 0.26
FN1-217ENST00000471193 NRXN3Q9Y4C0 1643 aa16.64■□□□□ 0.25
FN1-217ENST00000471193 VGFO15240 615 aaPredicted RBP16.64■□□□□ 0.25
FN1-217ENST00000471193 POLR1AO95602 1720 aaPredicted RBP16.64■□□□□ 0.25
FN1-217ENST00000471193 IQGAP1P46940 1657 aa16.63■□□□□ 0.25
FN1-217ENST00000471193 NUTM2DQ5VT03 806 aaPredicted RBP16.63■□□□□ 0.25
FN1-217ENST00000471193 PLEKHG1Q9ULL1 1385 aa16.63■□□□□ 0.25
FN1-217ENST00000471193 SETD1AO15047 1707 aaKnown RBP16.62■□□□□ 0.25
FN1-217ENST00000471193 LTKP29376 864 aa16.61■□□□□ 0.25
FN1-217ENST00000471193 HDGFP51858 240 aaKnown RBP16.61■□□□□ 0.25
FN1-217ENST00000471193 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
FN1-217ENST00000471193 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
FN1-217ENST00000471193 ALKQ9UM73 1620 aa16.59■□□□□ 0.25
FN1-217ENST00000471193 TXNDC2Q86VQ3 553 aa16.59■□□□□ 0.25
FN1-217ENST00000471193 GPRASP1Q5JY77 1395 aa16.59■□□□□ 0.25
FN1-217ENST00000471193 MED14O60244 1454 aa16.59■□□□□ 0.25
FN1-217ENST00000471193 ADGRB1O14514 1584 aa16.59■□□□□ 0.25
FN1-217ENST00000471193 DIP2AQ14689 1571 aa16.59■□□□□ 0.25
FN1-217ENST00000471193 ADAMTS13Q76LX8 1427 aa16.57■□□□□ 0.24
FN1-217ENST00000471193 ROCK2O75116 1388 aaKnown RBP16.56■□□□□ 0.24
FN1-217ENST00000471193 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
FN1-217ENST00000471193 C14orf93Q9H972 538 aaKnown RBP16.56■□□□□ 0.24
FN1-217ENST00000471193 NPHP4O75161 1426 aaPredicted RBP16.55■□□□□ 0.24
FN1-217ENST00000471193 CFAP70Q5T0N1 1121 aa16.55■□□□□ 0.24
FN1-217ENST00000471193 HSPA2P54652 639 aa16.54■□□□□ 0.24
FN1-217ENST00000471193 STRCQ7RTU9 1775 aa16.53■□□□□ 0.24
FN1-217ENST00000471193 NBPF1Q3BBV0 1214 aa16.52■□□□□ 0.24
FN1-217ENST00000471193 NCKAP5LQ9HCH0 1330 aa16.5■□□□□ 0.23
FN1-217ENST00000471193 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
FN1-217ENST00000471193 KNDC1Q76NI1 1749 aa16.49■□□□□ 0.23
FN1-217ENST00000471193 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
FN1-217ENST00000471193 METP08581 1390 aa16.49■□□□□ 0.23
FN1-217ENST00000471193 YTHDC2Q9H6S0 1430 aaKnown RBP16.48■□□□□ 0.23
FN1-217ENST00000471193 USP47Q96K76 1375 aa16.48■□□□□ 0.23
FN1-217ENST00000471193 BCANQ96GW7 911 aa16.47■□□□□ 0.23
FN1-217ENST00000471193 TBX22Q9Y458 520 aa16.47■□□□□ 0.23
FN1-217ENST00000471193 PIK3R4Q99570 1358 aa16.47■□□□□ 0.23
FN1-217ENST00000471193 XRN1Q8IZH2 1706 aaKnown RBP16.47■□□□□ 0.23
FN1-217ENST00000471193 ARHGEF28Q8N1W1 1705 aaKnown RBP16.47■□□□□ 0.23
FN1-217ENST00000471193 CPS1P31327 1500 aa16.46■□□□□ 0.23
FN1-217ENST00000471193 DLC1Q96QB1 1528 aa16.46■□□□□ 0.23
FN1-217ENST00000471193 SLC26A8Q96RN1 970 aa16.46■□□□□ 0.23
FN1-217ENST00000471193 LRPPRCP42704 1394 aaKnown RBP16.46■□□□□ 0.23
FN1-217ENST00000471193 NWD1Q149M9 1564 aa16.46■□□□□ 0.23
FN1-217ENST00000471193 TECPR2O15040 1411 aa16.45■□□□□ 0.22
FN1-217ENST00000471193 TMEM132EQ6IEE7 984 aa16.45■□□□□ 0.22
FN1-217ENST00000471193 PTPRUQ92729 1446 aa16.45■□□□□ 0.22
FN1-217ENST00000471193 EIF3AQ14152 1382 aaKnown RBP16.44■□□□□ 0.22
FN1-217ENST00000471193 ABCC11Q96J66 1382 aa16.42■□□□□ 0.22
FN1-217ENST00000471193 EIF4G2P78344 907 aaKnown RBP eCLIP16.42■□□□□ 0.22
FN1-217ENST00000471193 PTCH1Q13635 1447 aa16.42■□□□□ 0.22
FN1-217ENST00000471193 CHD2O14647 1828 aaKnown RBP16.42■□□□□ 0.22
FN1-217ENST00000471193 HSPA5P11021 654 aaKnown RBP16.41■□□□□ 0.22
FN1-217ENST00000471193 AEBP2Q6ZN18 517 aaPredicted RBP16.41■□□□□ 0.22
FN1-217ENST00000471193 QRICH2Q9H0J4 1663 aa16.4■□□□□ 0.22
FN1-217ENST00000471193 FAM135BQ49AJ0 1406 aa16.39■□□□□ 0.21
FN1-217ENST00000471193 TRAK1Q9UPV9 953 aa16.39■□□□□ 0.21
FN1-217ENST00000471193 STK26Q9P289 416 aa16.38■□□□□ 0.21
FN1-217ENST00000471193 NKTRP30414 1462 aaKnown RBP16.37■□□□□ 0.21
FN1-217ENST00000471193 ROBO2Q9HCK4 1378 aa16.37■□□□□ 0.21
FN1-217ENST00000471193 SBNO2Q9Y2G9 1366 aa16.37■□□□□ 0.21
FN1-217ENST00000471193 ST20-MTHFSA0A0A6YYL1 179 aa16.36■□□□□ 0.21
FN1-217ENST00000471193 AMOTL2Q9Y2J4 779 aa16.36■□□□□ 0.21
FN1-217ENST00000471193 CENPJQ9HC77 1338 aaPredicted RBP16.36■□□□□ 0.21
FN1-217ENST00000471193 STRCP1A6NGW2 1772 aa16.36■□□□□ 0.21
FN1-217ENST00000471193 SIRT1Q96EB6 747 aa16.35■□□□□ 0.21
FN1-217ENST00000471193 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
FN1-217ENST00000471193 PLEKHH1Q9ULM0 1364 aa16.34■□□□□ 0.21
FN1-217ENST00000471193 ADGRB2O60241 1585 aa16.34■□□□□ 0.21
FN1-217ENST00000471193 KCNA6P17658 529 aa16.33■□□□□ 0.2
FN1-217ENST00000471193 PRAM1Q96QH2 718 aa16.33■□□□□ 0.2
FN1-217ENST00000471193 TESK2Q96S53 571 aa16.33■□□□□ 0.2
FN1-217ENST00000471193 HIRIP3Q9BW71 556 aaPredicted RBP16.33■□□□□ 0.2
FN1-217ENST00000471193 TULP4Q9NRJ4 1543 aa16.31■□□□□ 0.2
FN1-217ENST00000471193 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.31■□□□□ 0.2
FN1-217ENST00000471193 POGKQ9P215 609 aa16.3■□□□□ 0.2
FN1-217ENST00000471193 NALCNQ8IZF0 1738 aa16.29■□□□□ 0.2
FN1-217ENST00000471193 WAPLQ7Z5K2 1190 aa16.29■□□□□ 0.2
FN1-217ENST00000471193 DISP3Q9P2K9 1392 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms