RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 ZNF592Q92610 1267 aa17.56■□□□□ 0.4
HDAC7-219ENST00000470668 PDZRN3Q9UPQ7 1066 aa17.56■□□□□ 0.4
HDAC7-219ENST00000470668 PHF14O94880 888 aa17.56■□□□□ 0.4
HDAC7-219ENST00000470668 DZIP1LQ8IYY4 767 aaKnown RBP17.55■□□□□ 0.4
HDAC7-219ENST00000470668 TRAK1Q9UPV9 953 aa17.55■□□□□ 0.4
HDAC7-219ENST00000470668 KANK1Q14678 1352 aa17.55■□□□□ 0.4
HDAC7-219ENST00000470668 POLA1P09884 1462 aaPredicted RBP17.55■□□□□ 0.4
HDAC7-219ENST00000470668 PTPRGP23470 1445 aa17.54■□□□□ 0.4
HDAC7-219ENST00000470668 CHMP3Q9Y3E7 222 aa17.53■□□□□ 0.4
HDAC7-219ENST00000470668 CC2D2AQ9P2K1 1620 aa17.52■□□□□ 0.4
HDAC7-219ENST00000470668 SLC4A10Q6U841 1118 aa17.52■□□□□ 0.4
HDAC7-219ENST00000470668 CCDC144AA2RUR9 1427 aa17.51■□□□□ 0.39
HDAC7-219ENST00000470668 PRDM10Q9NQV6 1147 aa17.5■□□□□ 0.39
HDAC7-219ENST00000470668 TOPBP1Q92547 1522 aa17.5■□□□□ 0.39
HDAC7-219ENST00000470668 DDX19BQ9UMR2 479 aa17.5■□□□□ 0.39
HDAC7-219ENST00000470668 CCDC173Q0VFZ6 552 aa17.49■□□□□ 0.39
HDAC7-219ENST00000470668 NUCB2P80303 420 aa17.49■□□□□ 0.39
HDAC7-219ENST00000470668 UQCRHLA0A096LP55 91 aa17.48■□□□□ 0.39
HDAC7-219ENST00000470668 UQCRHP07919 91 aa17.48■□□□□ 0.39
HDAC7-219ENST00000470668 MTERF4Q7Z6M4 381 aaKnown RBP17.48■□□□□ 0.39
HDAC7-219ENST00000470668 TIAM1Q13009 1591 aa17.48■□□□□ 0.39
HDAC7-219ENST00000470668 PRPF40AO75400 957 aaKnown RBP17.47■□□□□ 0.39
HDAC7-219ENST00000470668 RILPL2Q969X0 211 aa17.47■□□□□ 0.39
HDAC7-219ENST00000470668 PANK2Q9BZ23 570 aa17.46■□□□□ 0.39
HDAC7-219ENST00000470668 PRDM2Q13029 1718 aa17.46■□□□□ 0.39
HDAC7-219ENST00000470668 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
HDAC7-219ENST00000470668 NBPF1Q3BBV0 1214 aa17.45■□□□□ 0.38
HDAC7-219ENST00000470668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.45■□□□□ 0.38
HDAC7-219ENST00000470668 MAPK8IP2Q13387 824 aaPredicted RBP17.45■□□□□ 0.38
HDAC7-219ENST00000470668 LMOD2Q6P5Q4 547 aa17.45■□□□□ 0.38
HDAC7-219ENST00000470668 FYCO1Q9BQS8 1478 aa17.45■□□□□ 0.38
HDAC7-219ENST00000470668 NUTM2FA1L443 756 aa17.44■□□□□ 0.38
HDAC7-219ENST00000470668 CCDC39Q9UFE4 941 aa17.44■□□□□ 0.38
HDAC7-219ENST00000470668 PRG4Q92954 1404 aaPredicted RBP17.43■□□□□ 0.38
HDAC7-219ENST00000470668 ANKRD50Q9ULJ7 1429 aa17.43■□□□□ 0.38
HDAC7-219ENST00000470668 HMMRO75330 724 aa17.43■□□□□ 0.38
HDAC7-219ENST00000470668 RSPH4AQ5TD94 716 aa17.43■□□□□ 0.38
HDAC7-219ENST00000470668 ZSCAN30Q86W11 494 aa17.43■□□□□ 0.38
HDAC7-219ENST00000470668 KIF16BQ96L93 1317 aa17.43■□□□□ 0.38
HDAC7-219ENST00000470668 HAP1P54257 671 aaPredicted RBP17.42■□□□□ 0.38
HDAC7-219ENST00000470668 AFAP1Q8N556 730 aa17.42■□□□□ 0.38
HDAC7-219ENST00000470668 WASHC2CQ9Y4E1 1318 aa17.42■□□□□ 0.38
HDAC7-219ENST00000470668 IFT57Q9NWB7 429 aa17.41■□□□□ 0.38
HDAC7-219ENST00000470668 TBC1D2Q9BYX2 928 aa17.41■□□□□ 0.38
HDAC7-219ENST00000470668 HMGXB3Q12766 1538 aa17.41■□□□□ 0.38
HDAC7-219ENST00000470668 XRCC6P12956 609 aaKnown RBP eCLIP17.41■□□□□ 0.386e-6■■■■■ 31.4
HDAC7-219ENST00000470668 ZHX1Q9UKY1 873 aaPredicted RBP17.41■□□□□ 0.38
HDAC7-219ENST00000470668 PPP2R1AP30153 589 aa17.4■□□□□ 0.38
HDAC7-219ENST00000470668 PDE3AQ14432 1141 aa17.4■□□□□ 0.38
HDAC7-219ENST00000470668 PDCL3Q9H2J4 239 aa17.4■□□□□ 0.38
HDAC7-219ENST00000470668 ISY1Q9ULR0 285 aaKnown RBP17.4■□□□□ 0.38
HDAC7-219ENST00000470668 CCAR2Q8N163 923 aaKnown RBP17.4■□□□□ 0.38
HDAC7-219ENST00000470668 REC8O95072 547 aa17.39■□□□□ 0.38
HDAC7-219ENST00000470668 XPCQ01831 940 aaPredicted RBP17.39■□□□□ 0.37
HDAC7-219ENST00000470668 EIF3AQ14152 1382 aaKnown RBP17.39■□□□□ 0.37
HDAC7-219ENST00000470668 A0A0G2JS52 829 aa17.39■□□□□ 0.37
HDAC7-219ENST00000470668 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
HDAC7-219ENST00000470668 ANO2Q9NQ90 1003 aa17.38■□□□□ 0.37
HDAC7-219ENST00000470668 NAIPQ13075 1403 aa17.38■□□□□ 0.37
HDAC7-219ENST00000470668 HFM1A2PYH4 1435 aa17.38■□□□□ 0.37
HDAC7-219ENST00000470668 BECN2A8MW95 431 aa17.38■□□□□ 0.37
HDAC7-219ENST00000470668 GOLGA6L19H0YKK7 550 aa17.38■□□□□ 0.37
HDAC7-219ENST00000470668 DIAPH3Q9NSV4 1193 aa17.38■□□□□ 0.37
HDAC7-219ENST00000470668 CDK13Q14004 1512 aaKnown RBP17.38■□□□□ 0.37
HDAC7-219ENST00000470668 RTF1Q92541 710 aaKnown RBP17.38■□□□□ 0.37
HDAC7-219ENST00000470668 RUNDC1Q96C34 613 aa17.37■□□□□ 0.37
HDAC7-219ENST00000470668 HTATSF1O43719 755 aaKnown RBP17.36■□□□□ 0.37
HDAC7-219ENST00000470668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.36■□□□□ 0.37
HDAC7-219ENST00000470668 HSP90B1P14625 803 aaKnown RBP17.36■□□□□ 0.37
HDAC7-219ENST00000470668 CLCN1P35523 988 aa17.36■□□□□ 0.37
HDAC7-219ENST00000470668 HDGFL2Q7Z4V5 671 aaPredicted RBP17.36■□□□□ 0.37
HDAC7-219ENST00000470668 RRAGDQ9NQL2 400 aaPredicted RBP17.35■□□□□ 0.37
HDAC7-219ENST00000470668 PCF11O94913 1555 aaKnown RBP17.35■□□□□ 0.37
HDAC7-219ENST00000470668 NPHP1O15259 732 aa17.35■□□□□ 0.37
HDAC7-219ENST00000470668 ATP6V1DQ9Y5K8 247 aa17.35■□□□□ 0.37
HDAC7-219ENST00000470668 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
HDAC7-219ENST00000470668 HMGN5P82970 282 aaKnown RBP17.35■□□□□ 0.37
HDAC7-219ENST00000470668 GNL2Q13823 731 aaKnown RBP17.35■□□□□ 0.37
HDAC7-219ENST00000470668 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
HDAC7-219ENST00000470668 RIPK4P57078 832 aa17.34■□□□□ 0.37
HDAC7-219ENST00000470668 GRIN2BQ13224 1484 aa17.34■□□□□ 0.37
HDAC7-219ENST00000470668 NGEFQ8N5V2 710 aa17.34■□□□□ 0.37
HDAC7-219ENST00000470668 VPS37CA5D8V6 355 aaPredicted RBP17.34■□□□□ 0.37
HDAC7-219ENST00000470668 CBX1P83916 185 aa17.34■□□□□ 0.37
HDAC7-219ENST00000470668 C1orf115Q9H7X2 142 aa17.34■□□□□ 0.37
HDAC7-219ENST00000470668 SPC24Q8NBT2 197 aa17.33■□□□□ 0.36
HDAC7-219ENST00000470668 STK31Q9BXU1 1019 aa17.33■□□□□ 0.36
HDAC7-219ENST00000470668 CDC45O75419 566 aa17.32■□□□□ 0.36
HDAC7-219ENST00000470668 NEK4P51957 841 aa17.32■□□□□ 0.36
HDAC7-219ENST00000470668 INTS3Q68E01 1043 aaKnown RBP17.32■□□□□ 0.36
HDAC7-219ENST00000470668 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
HDAC7-219ENST00000470668 TSR2Q969E8 191 aaKnown RBP17.32■□□□□ 0.36
HDAC7-219ENST00000470668 K7ELQ4 463 aaPredicted RBP17.31■□□□□ 0.36
HDAC7-219ENST00000470668 FBXW7Q969H0 707 aa17.3■□□□□ 0.36
HDAC7-219ENST00000470668 MBD3O95983 291 aa17.3■□□□□ 0.36
HDAC7-219ENST00000470668 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
HDAC7-219ENST00000470668 TSPY26PQ9H489 355 aa17.3■□□□□ 0.36
HDAC7-219ENST00000470668 AAMPQ13685 434 aa17.3■□□□□ 0.36
HDAC7-219ENST00000470668 HOMER1Q86YM7 354 aa17.29■□□□□ 0.36
HDAC7-219ENST00000470668 GOLGA6L1Q8N7Z2 621 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms